EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000013837 (Gene tree)
Gene ID: 108256468
Gene Symbol: -
Alias: -
Full Name: serine/arginine repetitive matrix protein 5-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 12213 bases
Position: chr23:7185833-7198045
Accession: 108256468
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000020374	THRAP3_BCLAF1	PF15440.6	4.5e-25	1	1
ENSIPUP00000020390	THRAP3_BCLAF1	PF15440.6	2.7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000021252	-	5012	XM_017453382	ENSIPUP00000020374	793 (aa)	XP_017308871	A0A2D0PTW9
ENSIPUT00000021268	-	3875	-	ENSIPUP00000020390	414 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000013837's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000013837's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000013837	-	94	61.261	ENSAMXG00000013954	-	100	59.592	Astyanax_mexicanus
ENSIPUG00000013837	-	99	51.429	ENSDARG00000001829	zgc:112982	86	54.918	Danio_rerio
ENSIPUG00000013837	-	64	46.043	ENSMALG00000017681	-	92	52.155	Monopterus_albus
ENSIPUG00000013837	-	54	65.532	ENSPNAG00000021161	zgc:112982	99	59.231	Pygocentrus_nattereri
ENSIPUG00000013837	-	69	47.386	ENSSLDG00000008459	-	65	45.426	Seriola_lalandi_dorsalis