EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000013980 (Gene tree)
Gene ID: 108268215
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 8335 bases
Position: chr7:27790779-27799113
Accession: 108268215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000020609	MA3	PF02847.17	8.6e-24	1	1
ENSIPUP00000020609	MIF4G	PF02854.19	5.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000021494	-	4553	XM_017473036	ENSIPUP00000020609	827 (aa)	XP_017328525	A0A2D0RF50

Gene Model

Click here to download ENSIPUG00000013980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000013980's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000013980	nom1	94	53.226	ENSG00000146909	NOM1	64	62.909	Homo_sapiens
ENSIPUG00000013980	nom1	63	72.968	ENSAPOG00000012073	nom1	62	73.106	Acanthochromis_polyacanthus
ENSIPUG00000013980	nom1	82	56.999	ENSAMEG00000001412	NOM1	75	61.368	Ailuropoda_melanoleuca
ENSIPUG00000013980	nom1	98	59.590	ENSACIG00000018050	nom1	97	58.971	Amphilophus_citrinellus
ENSIPUG00000013980	nom1	63	72.212	ENSAOCG00000006229	nom1	62	72.348	Amphiprion_ocellaris
ENSIPUG00000013980	nom1	98	60.072	ENSAPEG00000015994	nom1	63	72.159	Amphiprion_percula
ENSIPUG00000013980	nom1	65	71.273	ENSATEG00000005405	nom1	65	72.968	Anabas_testudineus
ENSIPUG00000013980	nom1	80	55.394	ENSAPLG00000006585	NOM1	81	63.208	Anas_platyrhynchos
ENSIPUG00000013980	nom1	79	56.440	ENSACAG00000011192	NOM1	63	63.128	Anolis_carolinensis
ENSIPUG00000013980	nom1	63	73.019	ENSACLG00000000033	nom1	64	72.037	Astatotilapia_calliptera
ENSIPUG00000013980	nom1	63	83.019	ENSAMXG00000041486	nom1	61	83.176	Astyanax_mexicanus
ENSIPUG00000013980	nom1	97	52.644	ENSBTAG00000016435	NOM1	61	65.571	Bos_taurus
ENSIPUG00000013980	nom1	97	52.179	ENSCJAG00000004336	NOM1	64	62.069	Callithrix_jacchus
ENSIPUG00000013980	nom1	98	51.193	ENSCAFG00020005121	NOM1	64	61.343	Canis_lupus_dingo
ENSIPUG00000013980	nom1	82	57.720	ENSCHIG00000020102	NOM1	63	64.773	Capra_hircus
ENSIPUG00000013980	nom1	62	64.615	ENSCAPG00000016273	NOM1	99	64.615	Cavia_aperea
ENSIPUG00000013980	nom1	97	50.415	ENSCPOG00000025538	NOM1	90	59.707	Cavia_porcellus
ENSIPUG00000013980	nom1	89	63.850	ENSCCAG00000014944	NOM1	100	64.706	Cebus_capucinus
ENSIPUG00000013980	nom1	82	55.861	ENSCLAG00000000267	NOM1	63	61.039	Chinchilla_lanigera
ENSIPUG00000013980	nom1	69	63.636	ENSCPBG00000018215	NOM1	83	63.636	Chrysemys_picta_bellii
ENSIPUG00000013980	nom1	85	37.190	ENSCING00000005248	-	67	42.346	Ciona_intestinalis
ENSIPUG00000013980	nom1	63	64.068	ENSCANG00000041984	NOM1	90	64.068	Colobus_angolensis_palliatus
ENSIPUG00000013980	nom1	82	56.897	ENSCGRG00001020293	Nom1	61	63.118	Cricetulus_griseus_chok1gshd
ENSIPUG00000013980	nom1	63	63.118	ENSCGRG00000005405	Nom1	98	63.118	Cricetulus_griseus_crigri
ENSIPUG00000013980	nom1	94	56.910	ENSCSEG00000000932	nom1	62	70.276	Cynoglossus_semilaevis
ENSIPUG00000013980	nom1	98	58.604	ENSCVAG00000007562	nom1	63	71.348	Cyprinodon_variegatus
ENSIPUG00000013980	nom1	100	61.737	ENSDARG00000060027	nom1	100	72.485	Danio_rerio
ENSIPUG00000013980	nom1	64	50.184	ENSDORG00000015682	Nom1	79	50.000	Dipodomys_ordii
ENSIPUG00000013980	nom1	86	35.061	FBgn0035336	CG9004	60	38.964	Drosophila_melanogaster
ENSIPUG00000013980	nom1	56	62.963	ENSETEG00000003104	NOM1	77	46.468	Echinops_telfairi
ENSIPUG00000013980	nom1	52	49.091	ENSEBUG00000010077	nom1	96	49.091	Eptatretus_burgeri
ENSIPUG00000013980	nom1	82	58.730	ENSEASG00005001489	NOM1	64	62.929	Equus_asinus_asinus
ENSIPUG00000013980	nom1	68	62.347	ENSECAG00000007596	NOM1	59	62.816	Equus_caballus
ENSIPUG00000013980	nom1	65	70.727	ENSELUG00000006266	nom1	62	72.676	Esox_lucius
ENSIPUG00000013980	nom1	82	56.566	ENSFCAG00000006467	NOM1	67	61.957	Felis_catus
ENSIPUG00000013980	nom1	83	56.700	ENSFALG00000006904	NOM1	78	62.662	Ficedula_albicollis
ENSIPUG00000013980	nom1	99	51.708	ENSFDAG00000016241	NOM1	65	62.268	Fukomys_damarensis
ENSIPUG00000013980	nom1	98	59.689	ENSFHEG00000015974	nom1	64	71.402	Fundulus_heteroclitus
ENSIPUG00000013980	nom1	84	60.335	ENSGMOG00000005129	nom1	100	56.781	Gadus_morhua
ENSIPUG00000013980	nom1	98	58.153	ENSGAFG00000003211	nom1	64	71.023	Gambusia_affinis
ENSIPUG00000013980	nom1	83	55.134	ENSGAGG00000014347	NOM1	64	63.826	Gopherus_agassizii
ENSIPUG00000013980	nom1	66	62.816	ENSGGOG00000010920	NOM1	59	62.727	Gorilla_gorilla
ENSIPUG00000013980	nom1	63	72.830	ENSHBUG00000014616	nom1	65	71.852	Haplochromis_burtoni
ENSIPUG00000013980	nom1	98	52.425	ENSHGLG00000007392	NOM1	61	63.705	Heterocephalus_glaber_female
ENSIPUG00000013980	nom1	86	65.287	ENSHGLG00100014407	NOM1	61	63.705	Heterocephalus_glaber_male
ENSIPUG00000013980	nom1	66	61.511	ENSSTOG00000031736	NOM1	94	62.756	Ictidomys_tridecemlineatus
ENSIPUG00000013980	nom1	58	64.887	ENSJJAG00000011716	Nom1	98	64.887	Jaculus_jaculus
ENSIPUG00000013980	nom1	63	71.992	ENSLBEG00000009252	nom1	62	71.992	Labrus_bergylta
ENSIPUG00000013980	nom1	83	60.907	ENSLACG00000011777	NOM1	65	66.543	Latimeria_chalumnae
ENSIPUG00000013980	nom1	98	58.065	ENSLOCG00000012452	nom1	65	70.398	Lepisosteus_oculatus
ENSIPUG00000013980	nom1	97	46.228	ENSLAFG00000007119	NOM1	98	46.927	Loxodonta_africana
ENSIPUG00000013980	nom1	98	51.020	ENSMMUG00000039033	NOM1	63	58.333	Macaca_mulatta
ENSIPUG00000013980	nom1	63	64.259	ENSMLEG00000037062	NOM1	99	64.272	Mandrillus_leucophaeus
ENSIPUG00000013980	nom1	98	59.150	ENSMAMG00000004118	nom1	63	72.023	Mastacembelus_armatus
ENSIPUG00000013980	nom1	63	72.830	ENSMZEG00005000384	nom1	64	71.852	Maylandia_zebra
ENSIPUG00000013980	nom1	98	52.005	ENSMAUG00000017988	Nom1	65	62.362	Mesocricetus_auratus
ENSIPUG00000013980	nom1	66	61.844	ENSMICG00000017531	NOM1	65	61.636	Microcebus_murinus
ENSIPUG00000013980	nom1	99	52.128	ENSMOCG00000015962	Nom1	62	63.705	Microtus_ochrogaster
ENSIPUG00000013980	nom1	98	56.429	ENSMMOG00000004419	nom1	65	66.065	Mola_mola
ENSIPUG00000013980	nom1	65	63.736	ENSMODG00000005177	NOM1	63	64.916	Monodelphis_domestica
ENSIPUG00000013980	nom1	93	58.704	ENSMALG00000008800	nom1	61	73.444	Monopterus_albus
ENSIPUG00000013980	nom1	98	51.013	MGP_CAROLIEiJ_G0027043	Nom1	63	60.998	Mus_caroli
ENSIPUG00000013980	nom1	98	50.652	ENSMUSG00000001569	Nom1	63	61.296	Mus_musculus
ENSIPUG00000013980	nom1	98	49.763	MGP_SPRETEiJ_G0028039	Nom1	63	61.296	Mus_spretus
ENSIPUG00000013980	nom1	81	53.991	ENSMPUG00000009745	NOM1	75	61.686	Mustela_putorius_furo
ENSIPUG00000013980	nom1	71	59.339	ENSMLUG00000009129	NOM1	87	63.447	Myotis_lucifugus
ENSIPUG00000013980	nom1	98	60.240	ENSNBRG00000016429	nom1	95	72.642	Neolamprologus_brichardi
ENSIPUG00000013980	nom1	94	52.730	ENSNLEG00000000238	NOM1	63	61.273	Nomascus_leucogenys
ENSIPUG00000013980	nom1	70	54.824	ENSMEUG00000001108	NOM1	52	68.462	Notamacropus_eugenii
ENSIPUG00000013980	nom1	56	50.888	ENSOPRG00000014676	NOM1	51	54.455	Ochotona_princeps
ENSIPUG00000013980	nom1	82	57.536	ENSODEG00000009399	NOM1	75	62.764	Octodon_degus
ENSIPUG00000013980	nom1	85	65.363	ENSONIG00000005958	nom1	68	71.111	Oreochromis_niloticus
ENSIPUG00000013980	nom1	55	64.363	ENSOANG00000006139	-	97	64.363	Ornithorhynchus_anatinus
ENSIPUG00000013980	nom1	98	52.675	ENSOCUG00000004071	-	65	63.110	Oryctolagus_cuniculus
ENSIPUG00000013980	nom1	93	44.543	ENSOCUG00000021448	-	92	52.930	Oryctolagus_cuniculus
ENSIPUG00000013980	nom1	98	59.085	ENSORLG00000010541	nom1	63	72.381	Oryzias_latipes
ENSIPUG00000013980	nom1	83	64.225	ENSORLG00020010789	nom1	97	61.170	Oryzias_latipes_hni
ENSIPUG00000013980	nom1	98	59.512	ENSORLG00015010475	nom1	68	72.381	Oryzias_latipes_hsok
ENSIPUG00000013980	nom1	63	72.401	ENSOMEG00000004219	nom1	100	59.953	Oryzias_melastigma
ENSIPUG00000013980	nom1	71	60.235	ENSOGAG00000001124	NOM1	86	64.068	Otolemur_garnettii
ENSIPUG00000013980	nom1	82	57.994	ENSOARG00000007261	NOM1	71	64.015	Ovis_aries
ENSIPUG00000013980	nom1	94	53.607	ENSPPAG00000041374	NOM1	64	63.091	Pan_paniscus
ENSIPUG00000013980	nom1	82	56.590	ENSPTIG00000013532	NOM1	75	61.664	Panthera_tigris_altaica
ENSIPUG00000013980	nom1	94	52.847	ENSPTRG00000019917	NOM1	64	63.091	Pan_troglodytes
ENSIPUG00000013980	nom1	94	54.020	ENSPANG00000007605	NOM1	63	62.727	Papio_anubis
ENSIPUG00000013980	nom1	100	58.837	ENSPKIG00000005825	nom1	100	58.442	Paramormyrops_kingsleyae
ENSIPUG00000013980	nom1	68	61.082	ENSPSIG00000017848	NOM1	88	64.595	Pelodiscus_sinensis
ENSIPUG00000013980	nom1	98	57.623	ENSPMGG00000002577	nom1	65	70.943	Periophthalmus_magnuspinnatus
ENSIPUG00000013980	nom1	98	52.569	ENSPEMG00000024180	Nom1	63	62.915	Peromyscus_maniculatus_bairdii
ENSIPUG00000013980	nom1	99	50.286	ENSPCIG00000027941	NOM1	60	63.235	Phascolarctos_cinereus
ENSIPUG00000013980	nom1	99	58.588	ENSPFOG00000015771	nom1	63	71.456	Poecilia_formosa
ENSIPUG00000013980	nom1	64	70.709	ENSPLAG00000007856	nom1	65	71.456	Poecilia_latipinna
ENSIPUG00000013980	nom1	99	58.706	ENSPMEG00000014155	nom1	65	71.456	Poecilia_mexicana
ENSIPUG00000013980	nom1	98	59.140	ENSPREG00000008850	nom1	64	70.896	Poecilia_reticulata
ENSIPUG00000013980	nom1	94	50.312	ENSPPYG00000018222	NOM1	62	57.455	Pongo_abelii
ENSIPUG00000013980	nom1	74	58.216	ENSPCAG00000000440	NOM1	80	58.216	Procavia_capensis
ENSIPUG00000013980	nom1	63	62.193	ENSPCOG00000015222	NOM1	99	62.382	Propithecus_coquereli
ENSIPUG00000013980	nom1	98	50.943	ENSPVAG00000014760	NOM1	63	61.284	Pteropus_vampyrus
ENSIPUG00000013980	nom1	63	72.401	ENSPNYG00000006975	nom1	97	71.269	Pundamilia_nyererei
ENSIPUG00000013980	nom1	64	82.037	ENSPNAG00000011085	nom1	59	83.523	Pygocentrus_nattereri
ENSIPUG00000013980	nom1	98	49.880	ENSRNOG00000048969	AABR07059041.1	65	60.381	Rattus_norvegicus
ENSIPUG00000013980	nom1	98	52.758	ENSRBIG00000037042	NOM1	64	62.250	Rhinopithecus_bieti
ENSIPUG00000013980	nom1	98	52.638	ENSRROG00000037293	NOM1	64	62.069	Rhinopithecus_roxellana
ENSIPUG00000013980	nom1	54	54.933	ENSSHAG00000002835	-	99	59.080	Sarcophilus_harrisii
ENSIPUG00000013980	nom1	66	62.075	ENSSHAG00000017998	-	79	63.993	Sarcophilus_harrisii
ENSIPUG00000013980	nom1	58	71.546	ENSSFOG00015003196	nom1	100	71.546	Scleropages_formosus
ENSIPUG00000013980	nom1	98	60.744	ENSSMAG00000011047	nom1	62	72.348	Scophthalmus_maximus
ENSIPUG00000013980	nom1	98	60.357	ENSSDUG00000006834	nom1	62	72.968	Seriola_dumerili
ENSIPUG00000013980	nom1	98	60.287	ENSSLDG00000021812	nom1	63	72.212	Seriola_lalandi_dorsalis
ENSIPUG00000013980	nom1	85	48.626	ENSSPUG00000002556	NOM1	100	50.515	Sphenodon_punctatus
ENSIPUG00000013980	nom1	63	71.645	ENSSPAG00000000953	nom1	61	72.159	Stegastes_partitus
ENSIPUG00000013980	nom1	88	53.129	ENSTGUG00000000702	-	76	62.594	Taeniopygia_guttata
ENSIPUG00000013980	nom1	98	60.364	ENSTRUG00000010239	nom1	65	70.425	Takifugu_rubripes
ENSIPUG00000013980	nom1	98	57.971	ENSTNIG00000012783	nom1	67	70.209	Tetraodon_nigroviridis
ENSIPUG00000013980	nom1	92	52.888	ENSTTRG00000009691	NOM1	61	64.008	Tursiops_truncatus
ENSIPUG00000013980	nom1	82	57.720	ENSUAMG00000025450	NOM1	62	62.292	Ursus_americanus
ENSIPUG00000013980	nom1	82	57.431	ENSUMAG00000014275	NOM1	72	61.738	Ursus_maritimus
ENSIPUG00000013980	nom1	82	56.403	ENSVVUG00000002608	NOM1	63	61.273	Vulpes_vulpes
ENSIPUG00000013980	nom1	85	55.466	ENSXETG00000021611	nom1	82	69.417	Xenopus_tropicalis
ENSIPUG00000013980	nom1	98	58.929	ENSXMAG00000002451	nom1	64	71.780	Xiphophorus_maculatus