EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000014157 (Gene tree)
Gene ID: 108256660
Gene Symbol: YTHDF1
Alias: wu:fi35c09|zgc:55441
Full Name: YTH N6-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 13442 bases
Position: chr23:7280420-7293861
Accession: 108256660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000020911	YTH	PF04146.15	1.1e-40	1	1
ENSIPUP00000020879	YTH	PF04146.15	1.1e-40	1	1
ENSIPUP00000020900	YTH	PF04146.15	1.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000021797	-	1815	-	ENSIPUP00000020900	604 (aa)	-	-
ENSIPUT00000021809	-	1761	-	ENSIPUP00000020911	586 (aa)	-	-
ENSIPUT00000021776	-	4309	XM_017453742	ENSIPUP00000020879	599 (aa)	XP_017309231	W5UCK9

Gene Model

Click here to download ENSIPUG00000014157's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000014157's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000014157	YTHDF1	99	61.678	ENSIPUG00000011114	ythdf2	94	60.870
ENSIPUG00000014157	YTHDF1	97	62.304	ENSIPUG00000000425	Ythdf1	94	61.607

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000014157	YTHDF1	97	79.153	ENSG00000185728	YTHDF3	100	97.059	Homo_sapiens
ENSIPUG00000014157	YTHDF1	100	82.055	ENSAPOG00000024006	ythdf3	100	81.626	Acanthochromis_polyacanthus
ENSIPUG00000014157	YTHDF1	95	80.423	ENSAMEG00000018113	YTHDF3	97	78.333	Ailuropoda_melanoleuca
ENSIPUG00000014157	YTHDF1	96	73.756	ENSACIG00000022287	ythdf3	94	78.369	Amphilophus_citrinellus
ENSIPUG00000014157	YTHDF1	97	79.564	ENSAOCG00000000723	ythdf3	100	81.463	Amphiprion_ocellaris
ENSIPUG00000014157	YTHDF1	97	79.062	ENSAPEG00000020352	ythdf3	100	80.976	Amphiprion_percula
ENSIPUG00000014157	YTHDF1	85	91.327	ENSATEG00000011478	ythdf3	95	91.935	Anabas_testudineus
ENSIPUG00000014157	YTHDF1	98	79.392	ENSAPLG00000011329	YTHDF3	97	80.412	Anas_platyrhynchos
ENSIPUG00000014157	YTHDF1	100	79.373	ENSACAG00000016837	YTHDF3	100	80.795	Anolis_carolinensis
ENSIPUG00000014157	YTHDF1	97	79.322	ENSANAG00000037920	YTHDF3	100	78.606	Aotus_nancymaae
ENSIPUG00000014157	YTHDF1	51	89.320	ENSACLG00000026145	ythdf3	97	81.271	Astatotilapia_calliptera
ENSIPUG00000014157	YTHDF1	97	88.772	ENSAMXG00000030366	ythdf3	100	89.560	Astyanax_mexicanus
ENSIPUG00000014157	YTHDF1	97	79.322	ENSBTAG00000018557	YTHDF3	100	79.967	Bos_taurus
ENSIPUG00000014157	YTHDF1	97	79.322	ENSCJAG00000009217	YTHDF3	100	78.606	Callithrix_jacchus
ENSIPUG00000014157	YTHDF1	99	78.878	ENSCAFG00000007215	YTHDF3	97	78.167	Canis_familiaris
ENSIPUG00000014157	YTHDF1	94	80.072	ENSCAFG00020015995	YTHDF3	100	78.444	Canis_lupus_dingo
ENSIPUG00000014157	YTHDF1	100	77.368	ENSCHIG00000026460	YTHDF3	100	79.803	Capra_hircus
ENSIPUG00000014157	YTHDF1	97	78.644	ENSTSYG00000009117	YTHDF3	95	80.576	Carlito_syrichta
ENSIPUG00000014157	YTHDF1	97	78.535	ENSCPOG00000002961	YTHDF3	100	78.282	Cavia_porcellus
ENSIPUG00000014157	YTHDF1	97	79.153	ENSCCAG00000022316	YTHDF3	100	78.444	Cebus_capucinus
ENSIPUG00000014157	YTHDF1	97	79.153	ENSCATG00000038669	YTHDF3	100	78.444	Cercocebus_atys
ENSIPUG00000014157	YTHDF1	94	80.251	ENSCSAG00000014280	YTHDF3	100	78.606	Chlorocebus_sabaeus
ENSIPUG00000014157	YTHDF1	99	77.944	ENSCHOG00000010194	YTHDF3	98	76.833	Choloepus_hoffmanni
ENSIPUG00000014157	YTHDF1	98	78.261	ENSCANG00000032631	YTHDF3	100	78.444	Colobus_angolensis_palliatus
ENSIPUG00000014157	YTHDF1	99	77.167	ENSCGRG00001021204	Ythdf3	100	79.967	Cricetulus_griseus_chok1gshd
ENSIPUG00000014157	YTHDF1	99	79.866	ENSCGRG00000005613	-	100	79.564	Cricetulus_griseus_crigri
ENSIPUG00000014157	YTHDF1	67	56.203	ENSCGRG00000008289	-	100	52.758	Cricetulus_griseus_crigri
ENSIPUG00000014157	YTHDF1	100	82.899	ENSCSEG00000014861	ythdf3	99	80.098	Cynoglossus_semilaevis
ENSIPUG00000014157	YTHDF1	100	79.608	ENSCVAG00000018114	ythdf3	100	78.396	Cyprinodon_variegatus
ENSIPUG00000014157	YTHDF1	100	87.354	ENSDARG00000057939	ythdf3	100	87.022	Danio_rerio
ENSIPUG00000014157	YTHDF1	96	80.351	ENSDORG00000014699	Ythdf3	100	78.930	Dipodomys_ordii
ENSIPUG00000014157	YTHDF1	97	79.357	ENSETEG00000007144	YTHDF3	98	77.909	Echinops_telfairi
ENSIPUG00000014157	YTHDF1	97	79.153	ENSEASG00005016224	YTHDF3	100	78.444	Equus_asinus_asinus
ENSIPUG00000014157	YTHDF1	97	79.153	ENSECAG00000011093	YTHDF3	100	78.444	Equus_caballus
ENSIPUG00000014157	YTHDF1	100	79.206	ENSELUG00000014824	ythdf3	100	79.417	Esox_lucius
ENSIPUG00000014157	YTHDF1	97	78.983	ENSFCAG00000025314	YTHDF3	100	79.378	Felis_catus
ENSIPUG00000014157	YTHDF1	98	79.027	ENSFALG00000005503	YTHDF3	100	78.799	Ficedula_albicollis
ENSIPUG00000014157	YTHDF1	97	79.617	ENSFDAG00000002735	YTHDF3	100	77.997	Fukomys_damarensis
ENSIPUG00000014157	YTHDF1	100	80.325	ENSFHEG00000016395	ythdf3	100	78.467	Fundulus_heteroclitus
ENSIPUG00000014157	YTHDF1	100	78.748	ENSGMOG00000014950	ythdf3	100	78.607	Gadus_morhua
ENSIPUG00000014157	YTHDF1	100	79.373	ENSGALG00000039774	YTHDF3	100	80.693	Gallus_gallus
ENSIPUG00000014157	YTHDF1	100	80.163	ENSGAFG00000006529	ythdf3	97	77.685	Gambusia_affinis
ENSIPUG00000014157	YTHDF1	99	81.639	ENSGACG00000002998	ythdf3	97	80.339	Gasterosteus_aculeatus
ENSIPUG00000014157	YTHDF1	98	78.356	ENSGGOG00000027681	YTHDF3	100	77.562	Gorilla_gorilla
ENSIPUG00000014157	YTHDF1	97	75.524	ENSHBUG00000018631	ythdf3	97	80.833	Haplochromis_burtoni
ENSIPUG00000014157	YTHDF1	95	80.071	ENSHGLG00000009954	YTHDF3	100	78.282	Heterocephalus_glaber_female
ENSIPUG00000014157	YTHDF1	95	80.071	ENSHGLG00100012403	YTHDF3	100	78.161	Heterocephalus_glaber_male
ENSIPUG00000014157	YTHDF1	99	75.581	ENSHCOG00000015277	ythdf3	95	73.175	Hippocampus_comes
ENSIPUG00000014157	YTHDF1	99	77.258	ENSSTOG00000027792	YTHDF3	100	78.120	Ictidomys_tridecemlineatus
ENSIPUG00000014157	YTHDF1	95	79.894	ENSJJAG00000017742	Ythdf3	100	77.997	Jaculus_jaculus
ENSIPUG00000014157	YTHDF1	100	79.221	ENSKMAG00000008447	ythdf3	100	79.579	Kryptolebias_marmoratus
ENSIPUG00000014157	YTHDF1	95	81.449	ENSLACG00000002281	YTHDF3	100	79.545	Latimeria_chalumnae
ENSIPUG00000014157	YTHDF1	100	78.029	ENSLAFG00000016052	YTHDF3	100	78.296	Loxodonta_africana
ENSIPUG00000014157	YTHDF1	97	79.153	ENSMFAG00000043451	YTHDF3	100	78.444	Macaca_fascicularis
ENSIPUG00000014157	YTHDF1	97	80.416	ENSMMUG00000006729	YTHDF3	100	78.444	Macaca_mulatta
ENSIPUG00000014157	YTHDF1	98	78.523	ENSMNEG00000031200	YTHDF3	100	78.444	Macaca_nemestrina
ENSIPUG00000014157	YTHDF1	97	79.153	ENSMLEG00000036763	YTHDF3	100	78.444	Mandrillus_leucophaeus
ENSIPUG00000014157	YTHDF1	100	76.578	ENSMAMG00000000414	ythdf3	100	78.793	Mastacembelus_armatus
ENSIPUG00000014157	YTHDF1	97	75.524	ENSMZEG00005021836	ythdf3	97	81.345	Maylandia_zebra
ENSIPUG00000014157	YTHDF1	99	79.299	ENSMGAG00000011168	YTHDF3	99	80.634	Meleagris_gallopavo
ENSIPUG00000014157	YTHDF1	66	75.448	ENSMAUG00000012560	Ythdf3	97	75.661	Mesocricetus_auratus
ENSIPUG00000014157	YTHDF1	67	60.759	ENSMICG00000009379	-	100	59.420	Microcebus_murinus
ENSIPUG00000014157	YTHDF1	99	79.035	ENSMICG00000036869	-	97	77.342	Microcebus_murinus
ENSIPUG00000014157	YTHDF1	97	78.305	ENSMOCG00000011947	Ythdf3	100	79.530	Microtus_ochrogaster
ENSIPUG00000014157	YTHDF1	96	75.618	ENSMMOG00000003402	ythdf3	93	92.818	Mola_mola
ENSIPUG00000014157	YTHDF1	94	80.969	ENSMODG00000008255	YTHDF3	100	80.033	Monodelphis_domestica
ENSIPUG00000014157	YTHDF1	98	73.469	ENSMALG00000000147	ythdf3	92	90.860	Monopterus_albus
ENSIPUG00000014157	YTHDF1	97	78.475	MGP_CAROLIEiJ_G0024863	Ythdf3	100	79.801	Mus_caroli
ENSIPUG00000014157	YTHDF1	97	78.475	ENSMUSG00000047213	Ythdf3	100	79.801	Mus_musculus
ENSIPUG00000014157	YTHDF1	97	78.475	MGP_PahariEiJ_G0026310	Ythdf3	100	77.670	Mus_pahari
ENSIPUG00000014157	YTHDF1	94	80.251	ENSMPUG00000009857	YTHDF3	100	78.606	Mustela_putorius_furo
ENSIPUG00000014157	YTHDF1	99	78.939	ENSMLUG00000006541	YTHDF3	97	78.000	Myotis_lucifugus
ENSIPUG00000014157	YTHDF1	91	79.259	ENSNGAG00000018434	Ythdf3	93	80.455	Nannospalax_galili
ENSIPUG00000014157	YTHDF1	85	85.903	ENSNBRG00000023433	ythdf3	97	80.174	Neolamprologus_brichardi
ENSIPUG00000014157	YTHDF1	50	84.718	ENSNLEG00000003872	YTHDF3	94	80.576	Nomascus_leucogenys
ENSIPUG00000014157	YTHDF1	95	80.776	ENSMEUG00000011285	YTHDF3	98	79.457	Notamacropus_eugenii
ENSIPUG00000014157	YTHDF1	96	78.735	ENSODEG00000002033	YTHDF3	100	77.668	Octodon_degus
ENSIPUG00000014157	YTHDF1	51	88.997	ENSONIG00000014175	ythdf3	97	80.705	Oreochromis_niloticus
ENSIPUG00000014157	YTHDF1	99	79.139	ENSOANG00000005053	YTHDF3	100	80.667	Ornithorhynchus_anatinus
ENSIPUG00000014157	YTHDF1	100	77.994	ENSOCUG00000008723	YTHDF3	100	77.193	Oryctolagus_cuniculus
ENSIPUG00000014157	YTHDF1	100	81.209	ENSORLG00000008640	ythdf3	100	79.412	Oryzias_latipes
ENSIPUG00000014157	YTHDF1	100	81.046	ENSORLG00020014684	ythdf3	100	79.248	Oryzias_latipes_hni
ENSIPUG00000014157	YTHDF1	100	80.882	ENSORLG00015014880	ythdf3	100	79.085	Oryzias_latipes_hsok
ENSIPUG00000014157	YTHDF1	100	81.433	ENSOMEG00000008212	ythdf3	100	79.935	Oryzias_melastigma
ENSIPUG00000014157	YTHDF1	99	78.748	ENSOGAG00000002302	YTHDF3	97	78.167	Otolemur_garnettii
ENSIPUG00000014157	YTHDF1	97	77.190	ENSOARG00000016882	YTHDF3	96	79.487	Ovis_aries
ENSIPUG00000014157	YTHDF1	97	78.983	ENSPPAG00000043483	YTHDF3	100	78.120	Pan_paniscus
ENSIPUG00000014157	YTHDF1	97	78.983	ENSPPRG00000004665	YTHDF3	100	79.378	Panthera_pardus
ENSIPUG00000014157	YTHDF1	97	78.983	ENSPTIG00000021537	YTHDF3	100	78.571	Panthera_tigris_altaica
ENSIPUG00000014157	YTHDF1	97	79.153	ENSPTRG00000049135	YTHDF3	100	78.282	Pan_troglodytes
ENSIPUG00000014157	YTHDF1	97	79.153	ENSPANG00000008030	YTHDF3	100	78.444	Papio_anubis
ENSIPUG00000014157	YTHDF1	99	83.497	ENSPKIG00000008298	ythdf3	96	84.522	Paramormyrops_kingsleyae
ENSIPUG00000014157	YTHDF1	100	79.572	ENSPSIG00000015861	YTHDF3	100	81.353	Pelodiscus_sinensis
ENSIPUG00000014157	YTHDF1	97	78.475	ENSPEMG00000020975	Ythdf3	100	79.698	Peromyscus_maniculatus_bairdii
ENSIPUG00000014157	YTHDF1	95	81.305	ENSPCIG00000017629	YTHDF3	100	80.198	Phascolarctos_cinereus
ENSIPUG00000014157	YTHDF1	100	81.138	ENSPFOG00000006082	ythdf3	100	78.630	Poecilia_formosa
ENSIPUG00000014157	YTHDF1	100	80.976	ENSPLAG00000006902	ythdf3	100	78.467	Poecilia_latipinna
ENSIPUG00000014157	YTHDF1	100	81.463	ENSPMEG00000012922	ythdf3	100	78.956	Poecilia_mexicana
ENSIPUG00000014157	YTHDF1	100	80.519	ENSPREG00000019781	ythdf3	100	78.502	Poecilia_reticulata
ENSIPUG00000014157	YTHDF1	100	56.373	ENSPPYG00000018626	YTHDF3	100	92.553	Pongo_abelii
ENSIPUG00000014157	YTHDF1	99	79.436	ENSPCAG00000016282	YTHDF3	98	78.500	Procavia_capensis
ENSIPUG00000014157	YTHDF1	97	78.983	ENSPCOG00000004856	YTHDF3	100	78.282	Propithecus_coquereli
ENSIPUG00000014157	YTHDF1	80	95.699	ENSPVAG00000002740	YTHDF3	82	96.023	Pteropus_vampyrus
ENSIPUG00000014157	YTHDF1	85	85.903	ENSPNYG00000002949	ythdf3	96	85.268	Pundamilia_nyererei
ENSIPUG00000014157	YTHDF1	94	79.174	ENSRNOG00000010084	Ythdf3	100	79.636	Rattus_norvegicus
ENSIPUG00000014157	YTHDF1	97	78.983	ENSRBIG00000036465	YTHDF3	100	78.282	Rhinopithecus_bieti
ENSIPUG00000014157	YTHDF1	95	81.272	ENSRROG00000035231	YTHDF3	100	78.282	Rhinopithecus_roxellana
ENSIPUG00000014157	YTHDF1	97	79.322	ENSSBOG00000035287	YTHDF3	100	78.606	Saimiri_boliviensis_boliviensis
ENSIPUG00000014157	YTHDF1	96	80.877	ENSSHAG00000009482	YTHDF3	100	79.321	Sarcophilus_harrisii
ENSIPUG00000014157	YTHDF1	83	87.665	ENSSFOG00015015445	ythdf3	95	86.726	Scleropages_formosus
ENSIPUG00000014157	YTHDF1	99	81.481	ENSSMAG00000014999	ythdf3	100	78.000	Scophthalmus_maximus
ENSIPUG00000014157	YTHDF1	85	85.590	ENSSDUG00000014403	ythdf3	96	86.607	Seriola_dumerili
ENSIPUG00000014157	YTHDF1	51	89.644	ENSSLDG00000005029	ythdf3	100	81.463	Seriola_lalandi_dorsalis
ENSIPUG00000014157	YTHDF1	95	80.247	ENSSARG00000007626	YTHDF3	98	78.041	Sorex_araneus
ENSIPUG00000014157	YTHDF1	99	79.900	ENSSPUG00000009390	YTHDF3	98	80.920	Sphenodon_punctatus
ENSIPUG00000014157	YTHDF1	95	77.818	ENSSPAG00000001269	ythdf3	96	86.395	Stegastes_partitus
ENSIPUG00000014157	YTHDF1	92	78.456	ENSSSCG00000033144	YTHDF3	100	77.562	Sus_scrofa
ENSIPUG00000014157	YTHDF1	98	79.561	ENSTGUG00000011243	YTHDF3	96	82.162	Taeniopygia_guttata
ENSIPUG00000014157	YTHDF1	100	80.914	ENSTRUG00000007870	ythdf3	100	79.935	Takifugu_rubripes
ENSIPUG00000014157	YTHDF1	100	80.960	ENSTNIG00000012698	ythdf3	100	79.436	Tetraodon_nigroviridis
ENSIPUG00000014157	YTHDF1	77	85.714	ENSTBEG00000005747	YTHDF3	76	85.714	Tupaia_belangeri
ENSIPUG00000014157	YTHDF1	99	75.125	ENSTTRG00000014564	YTHDF3	95	77.396	Tursiops_truncatus
ENSIPUG00000014157	YTHDF1	97	79.153	ENSUAMG00000012624	YTHDF3	100	78.444	Ursus_americanus
ENSIPUG00000014157	YTHDF1	97	79.153	ENSUMAG00000014104	YTHDF3	96	78.297	Ursus_maritimus
ENSIPUG00000014157	YTHDF1	99	69.601	ENSVPAG00000008104	YTHDF3	85	89.674	Vicugna_pacos
ENSIPUG00000014157	YTHDF1	97	79.153	ENSVVUG00000018384	YTHDF3	100	78.444	Vulpes_vulpes
ENSIPUG00000014157	YTHDF1	100	79.669	ENSXETG00000021659	ythdf3	100	77.796	Xenopus_tropicalis
ENSIPUG00000014157	YTHDF1	100	79.436	ENSXCOG00000009687	ythdf3	100	78.073	Xiphophorus_couchianus
ENSIPUG00000014157	YTHDF1	100	80.357	ENSXMAG00000009698	ythdf3	100	78.571	Xiphophorus_maculatus