EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000014234 (Gene tree)
Gene ID: 108263025
Gene Symbol: arid4b
Alias: arid4b|ch1073-321c8.1|wu:fk47b11
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 168256 bases
Position: chr3:26349559-26517814
Accession: 108263025
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000020971	Tudor-knot	PF11717.8	7e-11	1	1
ENSIPUP00000020993	Tudor-knot	PF11717.8	7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000021898	-	6879	XM_017463397	ENSIPUP00000020993	1277 (aa)	XP_017318886	A0A2D0QKK2
ENSIPUT00000021949	-	3921	XM_017463400	ENSIPUP00000021042	1216 (aa)	XP_017318889	-
ENSIPUT00000021874	-	4068	-	ENSIPUP00000020971	1265 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000014234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000014234's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000014234	arid4b	87	71.498	ENSG00000054267	ARID4B	91	71.498	Homo_sapiens
ENSIPUG00000014234	arid4b	99	64.395	ENSAPOG00000010823	tomm20a	100	64.124	Acanthochromis_polyacanthus
ENSIPUG00000014234	arid4b	90	82.482	ENSACIG00000006313	tomm20a	99	82.482	Amphilophus_citrinellus
ENSIPUG00000014234	arid4b	99	63.864	ENSAOCG00000003330	tomm20a	100	64.242	Amphiprion_ocellaris
ENSIPUG00000014234	arid4b	99	63.712	ENSAPEG00000024018	tomm20a	100	64.291	Amphiprion_percula
ENSIPUG00000014234	arid4b	99	63.504	ENSATEG00000014930	tomm20a	100	63.424	Anabas_testudineus
ENSIPUG00000014234	arid4b	96	67.249	ENSAPLG00000004422	ARID4B	100	49.638	Anas_platyrhynchos
ENSIPUG00000014234	arid4b	53	59.072	ENSACAG00000001289	ARID4B	99	50.625	Anolis_carolinensis
ENSIPUG00000014234	arid4b	90	72.861	ENSACLG00000023521	tomm20a	99	72.127	Astatotilapia_calliptera
ENSIPUG00000014234	arid4b	96	66.883	ENSAMXG00000003657	tomm20a	97	71.084	Astyanax_mexicanus
ENSIPUG00000014234	arid4b	99	61.853	ENSCSEG00000012928	tomm20a	100	62.132	Cynoglossus_semilaevis
ENSIPUG00000014234	arid4b	96	62.279	ENSCVAG00000003244	tomm20a	100	63.476	Cyprinodon_variegatus
ENSIPUG00000014234	arid4b	100	64.134	ENSDARG00000090656	tomm20a	100	64.335	Danio_rerio
ENSIPUG00000014234	arid4b	99	50.805	ENSDORG00000006422	Arid4b	99	50.552	Dipodomys_ordii
ENSIPUG00000014234	arid4b	65	48.293	ENSELUG00000018441	tomm20a	89	44.744	Esox_lucius
ENSIPUG00000014234	arid4b	99	63.150	ENSFHEG00000003798	tomm20a	100	63.158	Fundulus_heteroclitus
ENSIPUG00000014234	arid4b	91	60.300	ENSGMOG00000018747	tomm20a	93	61.752	Gadus_morhua
ENSIPUG00000014234	arid4b	99	60.000	ENSGACG00000004298	tomm20a	100	61.667	Gasterosteus_aculeatus
ENSIPUG00000014234	arid4b	99	63.552	ENSHBUG00000020369	tomm20a	100	62.557	Haplochromis_burtoni
ENSIPUG00000014234	arid4b	91	77.230	ENSHCOG00000010376	tomm20a	98	77.700	Hippocampus_comes
ENSIPUG00000014234	arid4b	90	56.505	ENSKMAG00000010987	tomm20a	99	82.353	Kryptolebias_marmoratus
ENSIPUG00000014234	arid4b	53	64.275	ENSLOCG00000015899	tomm20a	100	57.262	Lepisosteus_oculatus
ENSIPUG00000014234	arid4b	54	57.931	ENSLAFG00000014295	ARID4B	99	50.220	Loxodonta_africana
ENSIPUG00000014234	arid4b	94	62.633	ENSMAMG00000017134	tomm20a	99	62.633	Mastacembelus_armatus
ENSIPUG00000014234	arid4b	99	63.398	ENSMZEG00005009879	tomm20a	100	62.481	Maylandia_zebra
ENSIPUG00000014234	arid4b	99	50.558	ENSMICG00000016358	ARID4B	100	50.292	Microcebus_murinus
ENSIPUG00000014234	arid4b	90	81.509	ENSMMOG00000000561	tomm20a	97	82.238	Mola_mola
ENSIPUG00000014234	arid4b	99	64.269	ENSMALG00000005205	tomm20a	100	64.329	Monopterus_albus
ENSIPUG00000014234	arid4b	90	80.825	ENSNBRG00000019684	tomm20a	99	81.311	Neolamprologus_brichardi
ENSIPUG00000014234	arid4b	58	45.466	ENSNLEG00000002665	ARID4B	100	50.475	Nomascus_leucogenys
ENSIPUG00000014234	arid4b	100	61.234	ENSORLG00000012510	tomm20a	100	60.274	Oryzias_latipes
ENSIPUG00000014234	arid4b	92	77.014	ENSORLG00020013988	tomm20a	100	77.647	Oryzias_latipes_hni
ENSIPUG00000014234	arid4b	92	77.857	ENSORLG00015022835	tomm20a	100	78.014	Oryzias_latipes_hsok
ENSIPUG00000014234	arid4b	99	62.162	ENSOMEG00000000521	tomm20a	100	61.890	Oryzias_melastigma
ENSIPUG00000014234	arid4b	50	65.625	ENSPMGG00000001596	tomm20a	89	65.625	Periophthalmus_magnuspinnatus
ENSIPUG00000014234	arid4b	100	50.737	ENSPCIG00000029756	ARID4B	100	50.860	Phascolarctos_cinereus
ENSIPUG00000014234	arid4b	99	61.668	ENSPFOG00000019430	tomm20a	100	63.014	Poecilia_formosa
ENSIPUG00000014234	arid4b	99	61.668	ENSPLAG00000010554	tomm20a	100	62.622	Poecilia_latipinna
ENSIPUG00000014234	arid4b	99	60.150	ENSPMEG00000003093	tomm20a	100	60.954	Poecilia_mexicana
ENSIPUG00000014234	arid4b	99	62.270	ENSPREG00000007996	tomm20a	100	62.991	Poecilia_reticulata
ENSIPUG00000014234	arid4b	55	71.739	ENSPVAG00000015159	ARID4B	100	51.629	Pteropus_vampyrus
ENSIPUG00000014234	arid4b	99	61.364	ENSPNYG00000013988	tomm20a	100	61.158	Pundamilia_nyererei
ENSIPUG00000014234	arid4b	100	75.939	ENSPNAG00000000523	tomm20a	93	76.245	Pygocentrus_nattereri
ENSIPUG00000014234	arid4b	87	46.250	ENSRNOG00000016391	LOC100912163	96	46.432	Rattus_norvegicus
ENSIPUG00000014234	arid4b	90	69.779	ENSRBIG00000042029	ARID4B	99	46.741	Rhinopithecus_bieti
ENSIPUG00000014234	arid4b	54	57.895	ENSSHAG00000015214	ARID4B	100	49.891	Sarcophilus_harrisii
ENSIPUG00000014234	arid4b	75	47.866	ENSSFOG00015008923	tomm20a	100	49.089	Scleropages_formosus
ENSIPUG00000014234	arid4b	99	61.128	ENSSMAG00000010430	tomm20a	100	61.979	Scophthalmus_maximus
ENSIPUG00000014234	arid4b	99	65.197	ENSSDUG00000003019	tomm20a	100	65.320	Seriola_dumerili
ENSIPUG00000014234	arid4b	99	64.467	ENSSPAG00000007358	tomm20a	100	64.269	Stegastes_partitus
ENSIPUG00000014234	arid4b	61	53.593	ENSTRUG00000002893	tomm20a	92	53.699	Takifugu_rubripes
ENSIPUG00000014234	arid4b	71	64.548	ENSTBEG00000003961	ARID4B	68	63.814	Tupaia_belangeri
ENSIPUG00000014234	arid4b	100	47.222	ENSXETG00000024651	arid4b	100	47.434	Xenopus_tropicalis
ENSIPUG00000014234	arid4b	99	63.346	ENSXMAG00000006538	tomm20a	100	63.448	Xiphophorus_maculatus