EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000014247 (Gene tree)
Gene ID: 108268220
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 20908 bases
Position: chr7:28068446-28089353
Accession: 108268220
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000021025	zf-RanBP	PF00641.18	5.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000021932	-	4254	XM_017473056	ENSIPUP00000021025	708 (aa)	XP_017328545	A0A2D0RF70

Gene Model

Click here to download ENSIPUG00000014247's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu04217	Necroptosis	KEGG
ipu04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000014247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000014247	shrprbck1r	54	53.086	ENSIPUG00000011951	sharpin	92	67.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000014247	shrprbck1r	58	54.717	ENSAPOG00000023352	sharpin	90	56.968	Acanthochromis_polyacanthus
ENSIPUG00000014247	shrprbck1r	100	66.988	ENSAPOG00000022737	shrprbck1r	96	69.220	Acanthochromis_polyacanthus
ENSIPUG00000014247	shrprbck1r	100	66.896	ENSACIG00000002184	shrprbck1r	95	69.096	Amphilophus_citrinellus
ENSIPUG00000014247	shrprbck1r	58	54.717	ENSAOCG00000017464	sharpin	88	57.320	Amphiprion_ocellaris
ENSIPUG00000014247	shrprbck1r	96	69.744	ENSAOCG00000002890	shrprbck1r	96	70.115	Amphiprion_ocellaris
ENSIPUG00000014247	shrprbck1r	58	54.717	ENSAPEG00000004049	sharpin	88	57.606	Amphiprion_percula
ENSIPUG00000014247	shrprbck1r	96	68.714	ENSAPEG00000023274	shrprbck1r	96	69.075	Amphiprion_percula
ENSIPUG00000014247	shrprbck1r	100	65.055	ENSATEG00000014561	shrprbck1r	96	67.532	Anabas_testudineus
ENSIPUG00000014247	shrprbck1r	58	55.924	ENSATEG00000007832	sharpin	82	57.178	Anabas_testudineus
ENSIPUG00000014247	shrprbck1r	97	67.278	ENSACLG00000022609	shrprbck1r	96	68.831	Astatotilapia_calliptera
ENSIPUG00000014247	shrprbck1r	54	53.266	ENSAMXG00000006229	sharpin	97	53.266	Astyanax_mexicanus
ENSIPUG00000014247	shrprbck1r	99	79.586	ENSAMXG00000021016	shrprbck1r	97	81.020	Astyanax_mexicanus
ENSIPUG00000014247	shrprbck1r	98	63.268	ENSCSEG00000011306	shrprbck1r	96	65.130	Cynoglossus_semilaevis
ENSIPUG00000014247	shrprbck1r	55	56.709	ENSCVAG00000006586	sharpin	89	56.709	Cyprinodon_variegatus
ENSIPUG00000014247	shrprbck1r	100	66.483	ENSCVAG00000007250	shrprbck1r	96	68.452	Cyprinodon_variegatus
ENSIPUG00000014247	shrprbck1r	54	54.822	ENSDARG00000076995	sharpin	95	54.822	Danio_rerio
ENSIPUG00000014247	shrprbck1r	96	75.325	ENSDARG00000059871	shrprbck1r	97	75.325	Danio_rerio
ENSIPUG00000014247	shrprbck1r	96	70.893	ENSELUG00000016022	shrprbck1r	97	70.893	Esox_lucius
ENSIPUG00000014247	shrprbck1r	54	58.140	ENSFHEG00000013564	sharpin	87	58.140	Fundulus_heteroclitus
ENSIPUG00000014247	shrprbck1r	100	64.512	ENSGAFG00000009309	shrprbck1r	96	66.378	Gambusia_affinis
ENSIPUG00000014247	shrprbck1r	54	42.569	ENSGAFG00000021405	sharpin	87	42.569	Gambusia_affinis
ENSIPUG00000014247	shrprbck1r	75	66.606	ENSGACG00000002544	shrprbck1r	99	66.543	Gasterosteus_aculeatus
ENSIPUG00000014247	shrprbck1r	98	66.621	ENSHBUG00000021933	shrprbck1r	96	68.097	Haplochromis_burtoni
ENSIPUG00000014247	shrprbck1r	58	52.278	ENSHCOG00000018847	sharpin	81	53.810	Hippocampus_comes
ENSIPUG00000014247	shrprbck1r	58	55.556	ENSKMAG00000015204	sharpin	71	57.393	Kryptolebias_marmoratus
ENSIPUG00000014247	shrprbck1r	100	65.021	ENSKMAG00000015215	shrprbck1r	96	66.857	Kryptolebias_marmoratus
ENSIPUG00000014247	shrprbck1r	58	55.792	ENSLBEG00000016624	sharpin	88	58.500	Labrus_bergylta
ENSIPUG00000014247	shrprbck1r	100	67.034	ENSLBEG00000016876	shrprbck1r	96	69.308	Labrus_bergylta
ENSIPUG00000014247	shrprbck1r	95	53.790	ENSLACG00000010948	-	97	53.790	Latimeria_chalumnae
ENSIPUG00000014247	shrprbck1r	96	68.201	ENSLOCG00000008910	shrprbck1r	97	68.580	Lepisosteus_oculatus
ENSIPUG00000014247	shrprbck1r	100	65.517	ENSMAMG00000022930	shrprbck1r	97	67.385	Mastacembelus_armatus
ENSIPUG00000014247	shrprbck1r	97	67.137	ENSMZEG00005021257	shrprbck1r	96	68.687	Maylandia_zebra
ENSIPUG00000014247	shrprbck1r	100	65.793	ENSMMOG00000003764	shrprbck1r	96	68.116	Mola_mola
ENSIPUG00000014247	shrprbck1r	95	69.287	ENSMALG00000008861	shrprbck1r	95	69.287	Monopterus_albus
ENSIPUG00000014247	shrprbck1r	98	66.345	ENSNBRG00000002270	shrprbck1r	96	68.687	Neolamprologus_brichardi
ENSIPUG00000014247	shrprbck1r	55	50.119	ENSONIG00000009626	-	99	50.119	Oreochromis_niloticus
ENSIPUG00000014247	shrprbck1r	98	66.621	ENSONIG00000014401	shrprbck1r	96	68.975	Oreochromis_niloticus
ENSIPUG00000014247	shrprbck1r	95	67.826	ENSORLG00000007392	shrprbck1r	96	67.971	Oryzias_latipes
ENSIPUG00000014247	shrprbck1r	60	53.917	ENSORLG00000017281	sharpin	88	55.949	Oryzias_latipes
ENSIPUG00000014247	shrprbck1r	58	54.265	ENSORLG00020000801	sharpin	88	55.949	Oryzias_latipes_hni
ENSIPUG00000014247	shrprbck1r	95	68.116	ENSORLG00020018619	shrprbck1r	96	68.116	Oryzias_latipes_hni
ENSIPUG00000014247	shrprbck1r	95	67.493	ENSORLG00015018865	shrprbck1r	96	67.493	Oryzias_latipes_hsok
ENSIPUG00000014247	shrprbck1r	58	54.265	ENSORLG00015009860	sharpin	88	55.919	Oryzias_latipes_hsok
ENSIPUG00000014247	shrprbck1r	95	68.940	ENSOMEG00000012749	shrprbck1r	96	68.940	Oryzias_melastigma
ENSIPUG00000014247	shrprbck1r	65	57.384	ENSPKIG00000018308	-	91	60.268	Paramormyrops_kingsleyae
ENSIPUG00000014247	shrprbck1r	96	72.993	ENSPKIG00000006933	shrprbck1r	97	72.993	Paramormyrops_kingsleyae
ENSIPUG00000014247	shrprbck1r	97	66.809	ENSPMGG00000013254	shrprbck1r	95	68.576	Periophthalmus_magnuspinnatus
ENSIPUG00000014247	shrprbck1r	54	56.923	ENSPFOG00000015253	sharpin	88	56.923	Poecilia_formosa
ENSIPUG00000014247	shrprbck1r	98	65.738	ENSPFOG00000004214	shrprbck1r	96	67.100	Poecilia_formosa
ENSIPUG00000014247	shrprbck1r	54	57.179	ENSPLAG00000000423	sharpin	88	57.179	Poecilia_latipinna
ENSIPUG00000014247	shrprbck1r	98	65.599	ENSPLAG00000020523	shrprbck1r	96	66.955	Poecilia_latipinna
ENSIPUG00000014247	shrprbck1r	98	65.272	ENSPMEG00000006877	shrprbck1r	96	66.618	Poecilia_mexicana
ENSIPUG00000014247	shrprbck1r	54	56.923	ENSPREG00000009702	sharpin	88	56.923	Poecilia_reticulata
ENSIPUG00000014247	shrprbck1r	100	64.463	ENSPREG00000014689	shrprbck1r	96	65.896	Poecilia_reticulata
ENSIPUG00000014247	shrprbck1r	98	66.759	ENSPNYG00000022601	shrprbck1r	96	69.120	Pundamilia_nyererei
ENSIPUG00000014247	shrprbck1r	96	81.089	ENSPNAG00000007847	shrprbck1r	97	81.089	Pygocentrus_nattereri
ENSIPUG00000014247	shrprbck1r	54	49.622	ENSPNAG00000002911	sharpin	99	49.874	Pygocentrus_nattereri
ENSIPUG00000014247	shrprbck1r	57	64.706	ENSSFOG00015004028	sharpin	92	52.688	Scleropages_formosus
ENSIPUG00000014247	shrprbck1r	74	62.879	ENSSFOG00015014150	-	96	62.429	Scleropages_formosus
ENSIPUG00000014247	shrprbck1r	100	65.850	ENSSMAG00000018085	shrprbck1r	96	68.097	Scophthalmus_maximus
ENSIPUG00000014247	shrprbck1r	58	41.943	ENSSDUG00000019039	sharpin	90	42.928	Seriola_dumerili
ENSIPUG00000014247	shrprbck1r	100	67.720	ENSSDUG00000002959	shrprbck1r	96	70.014	Seriola_dumerili
ENSIPUG00000014247	shrprbck1r	100	68.000	ENSSLDG00000009026	shrprbck1r	96	70.317	Seriola_lalandi_dorsalis
ENSIPUG00000014247	shrprbck1r	92	67.552	ENSSPAG00000016097	shrprbck1r	95	67.809	Stegastes_partitus
ENSIPUG00000014247	shrprbck1r	97	65.867	ENSTRUG00000006949	shrprbck1r	96	66.858	Takifugu_rubripes
ENSIPUG00000014247	shrprbck1r	58	50.608	ENSTRUG00000011046	sharpin	87	53.470	Takifugu_rubripes
ENSIPUG00000014247	shrprbck1r	54	51.980	ENSTNIG00000008521	sharpin	94	51.990	Tetraodon_nigroviridis
ENSIPUG00000014247	shrprbck1r	54	44.051	ENSXCOG00000015019	sharpin	88	44.051	Xiphophorus_couchianus
ENSIPUG00000014247	shrprbck1r	100	63.674	ENSXCOG00000006701	shrprbck1r	96	65.507	Xiphophorus_couchianus
ENSIPUG00000014247	shrprbck1r	100	63.674	ENSXMAG00000018972	shrprbck1r	96	65.507	Xiphophorus_maculatus
ENSIPUG00000014247	shrprbck1r	54	57.436	ENSXMAG00000022076	sharpin	88	57.436	Xiphophorus_maculatus