EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000014412 (Gene tree)
Gene ID: 108256715
Gene Symbol: rrs1
Alias: fj66c04|wu:fj66c04|zgc:66358
Full Name: ribosome biogenesis regulator homolog
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 1047 bases
Position: chr23:7596930-7597976
Accession: 108256715
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000021240	RRS1	PF04939.12	1.5e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000022161	-	1047	XM_017453872	ENSIPUP00000021240	348 (aa)	XP_017309361	A0A2D0PVB3

Gene Model

Click here to download ENSIPUG00000014412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000014412's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000014412	rrs1	89	64.744	ENSG00000179041	RRS1	82	65.436	Homo_sapiens
ENSIPUG00000014412	rrs1	89	72.930	ENSATEG00000011743	rrs1	85	75.084	Anabas_testudineus
ENSIPUG00000014412	rrs1	96	62.722	ENSANAG00000018116	RRS1	82	65.772	Aotus_nancymaae
ENSIPUG00000014412	rrs1	100	71.307	ENSAMXG00000037893	rrs1	91	69.602	Astyanax_mexicanus
ENSIPUG00000014412	rrs1	96	62.130	ENSBTAG00000016716	RRS1	82	65.101	Bos_taurus
ENSIPUG00000014412	rrs1	93	43.953	WBGene00007617	rrbs-1	99	41.840	Caenorhabditis_elegans
ENSIPUG00000014412	rrs1	95	63.363	ENSCJAG00000022034	RRS1	80	66.212	Callithrix_jacchus
ENSIPUG00000014412	rrs1	89	64.423	ENSCAFG00000007313	RRS1	82	65.101	Canis_familiaris
ENSIPUG00000014412	rrs1	89	64.423	ENSCAFG00020020365	-	82	65.101	Canis_lupus_dingo
ENSIPUG00000014412	rrs1	89	64.423	ENSCAFG00020016049	-	82	65.101	Canis_lupus_dingo
ENSIPUG00000014412	rrs1	89	64.423	ENSCHIG00000009141	RRS1	82	65.101	Capra_hircus
ENSIPUG00000014412	rrs1	96	62.275	ENSCPOG00000000647	RRS1	83	65.772	Cavia_porcellus
ENSIPUG00000014412	rrs1	96	63.314	ENSCCAG00000032186	RRS1	82	65.772	Cebus_capucinus
ENSIPUG00000014412	rrs1	89	65.385	ENSCATG00000016944	RRS1	82	66.107	Cercocebus_atys
ENSIPUG00000014412	rrs1	89	65.705	ENSCSAG00000018552	RRS1	82	66.443	Chlorocebus_sabaeus
ENSIPUG00000014412	rrs1	89	64.423	ENSCHOG00000002455	RRS1	82	65.101	Choloepus_hoffmanni
ENSIPUG00000014412	rrs1	89	54.688	ENSCPBG00000021374	RRS1	87	55.556	Chrysemys_picta_bellii
ENSIPUG00000014412	rrs1	91	51.735	ENSCING00000002177	-	90	53.584	Ciona_intestinalis
ENSIPUG00000014412	rrs1	94	50.606	ENSCSAVG00000011819	-	90	52.901	Ciona_savignyi
ENSIPUG00000014412	rrs1	96	63.501	ENSCANG00000012718	RRS1	82	66.107	Colobus_angolensis_palliatus
ENSIPUG00000014412	rrs1	94	61.628	ENSCGRG00001015575	-	86	65.333	Cricetulus_griseus_chok1gshd
ENSIPUG00000014412	rrs1	100	61.299	ENSCGRG00001002391	-	82	65.436	Cricetulus_griseus_chok1gshd
ENSIPUG00000014412	rrs1	85	63.300	ENSCSEG00000014750	rrs1	81	63.300	Cynoglossus_semilaevis
ENSIPUG00000014412	rrs1	87	62.171	ENSCVAG00000017878	rrs1	90	60.252	Cyprinodon_variegatus
ENSIPUG00000014412	rrs1	86	80.602	ENSDARG00000003941	rrs1	100	76.068	Danio_rerio
ENSIPUG00000014412	rrs1	89	64.103	ENSDNOG00000017900	RRS1	81	64.765	Dasypus_novemcinctus
ENSIPUG00000014412	rrs1	59	68.900	ENSDORG00000026331	Rrs1	77	69.307	Dipodomys_ordii
ENSIPUG00000014412	rrs1	83	47.119	FBgn0052409	CG32409	84	47.973	Drosophila_melanogaster
ENSIPUG00000014412	rrs1	56	64.796	ENSETEG00000000935	-	54	64.796	Echinops_telfairi
ENSIPUG00000014412	rrs1	86	56.376	ENSEBUG00000013506	rrs1	96	57.193	Eptatretus_burgeri
ENSIPUG00000014412	rrs1	89	64.423	ENSEASG00005001691	RRS1	82	65.101	Equus_asinus_asinus
ENSIPUG00000014412	rrs1	98	61.516	ENSECAG00000004492	RRS1	89	65.101	Equus_caballus
ENSIPUG00000014412	rrs1	89	63.462	ENSEEUG00000013719	RRS1	82	64.333	Erinaceus_europaeus
ENSIPUG00000014412	rrs1	89	63.462	ENSFCAG00000014332	RRS1	82	64.667	Felis_catus
ENSIPUG00000014412	rrs1	89	51.235	ENSGALG00000030890	RRS1	86	53.896	Gallus_gallus
ENSIPUG00000014412	rrs1	85	74.411	ENSGACG00000002969	rrs1	83	74.411	Gasterosteus_aculeatus
ENSIPUG00000014412	rrs1	89	55.205	ENSGAGG00000023718	RRS1	85	55.882	Gopherus_agassizii
ENSIPUG00000014412	rrs1	89	65.385	ENSGGOG00000026663	RRS1	82	66.107	Gorilla_gorilla
ENSIPUG00000014412	rrs1	96	61.607	ENSHGLG00000021423	RRS1	82	64.765	Heterocephalus_glaber_female
ENSIPUG00000014412	rrs1	96	61.607	ENSHGLG00100020640	RRS1	82	64.765	Heterocephalus_glaber_male
ENSIPUG00000014412	rrs1	99	66.292	ENSHCOG00000015358	rrs1	88	68.868	Hippocampus_comes
ENSIPUG00000014412	rrs1	99	60.278	ENSSTOG00000026310	RRS1	82	65.436	Ictidomys_tridecemlineatus
ENSIPUG00000014412	rrs1	80	59.353	ENSJJAG00000020395	-	81	59.353	Jaculus_jaculus
ENSIPUG00000014412	rrs1	87	65.789	ENSJJAG00000011507	-	82	66.000	Jaculus_jaculus
ENSIPUG00000014412	rrs1	85	71.717	ENSKMAG00000008238	rrs1	88	71.717	Kryptolebias_marmoratus
ENSIPUG00000014412	rrs1	89	74.110	ENSLACG00000004058	RRS1	91	75.920	Latimeria_chalumnae
ENSIPUG00000014412	rrs1	100	75.000	ENSLOCG00000017812	rrs1	100	75.072	Lepisosteus_oculatus
ENSIPUG00000014412	rrs1	89	64.103	ENSLAFG00000015405	RRS1	81	65.436	Loxodonta_africana
ENSIPUG00000014412	rrs1	89	65.385	ENSMFAG00000042747	RRS1	82	66.107	Macaca_fascicularis
ENSIPUG00000014412	rrs1	89	65.385	ENSMMUG00000000886	RRS1	82	66.107	Macaca_mulatta
ENSIPUG00000014412	rrs1	89	65.385	ENSMNEG00000011696	RRS1	82	66.107	Macaca_nemestrina
ENSIPUG00000014412	rrs1	89	65.385	ENSMLEG00000004794	RRS1	82	66.107	Mandrillus_leucophaeus
ENSIPUG00000014412	rrs1	85	72.391	ENSMZEG00005004349	RRS1	83	72.391	Maylandia_zebra
ENSIPUG00000014412	rrs1	98	60.055	ENSMAUG00000005392	Rrs1	82	65.436	Mesocricetus_auratus
ENSIPUG00000014412	rrs1	99	62.139	ENSMOCG00000015862	Rrs1	77	65.436	Microtus_ochrogaster
ENSIPUG00000014412	rrs1	88	64.516	ENSMODG00000024952	RRS1	82	65.217	Monodelphis_domestica
ENSIPUG00000014412	rrs1	99	62.428	MGP_CAROLIEiJ_G0013936	Rrs1	82	65.772	Mus_caroli
ENSIPUG00000014412	rrs1	99	62.428	ENSMUSG00000061024	Rrs1	82	65.772	Mus_musculus
ENSIPUG00000014412	rrs1	94	62.121	MGP_PahariEiJ_G0023883	Rrs1	82	64.094	Mus_pahari
ENSIPUG00000014412	rrs1	99	62.428	MGP_SPRETEiJ_G0014739	Rrs1	82	65.772	Mus_spretus
ENSIPUG00000014412	rrs1	99	58.678	ENSMPUG00000018626	RRS1	80	65.101	Mustela_putorius_furo
ENSIPUG00000014412	rrs1	96	63.314	ENSNGAG00000012904	Rrs1	82	66.443	Nannospalax_galili
ENSIPUG00000014412	rrs1	67	68.936	ENSNLEG00000027730	RRS1	74	68.722	Nomascus_leucogenys
ENSIPUG00000014412	rrs1	85	73.401	ENSONIG00000014187	rrs1	86	73.401	Oreochromis_niloticus
ENSIPUG00000014412	rrs1	96	58.806	ENSOANG00000012348	RRS1	80	61.873	Ornithorhynchus_anatinus
ENSIPUG00000014412	rrs1	89	63.782	ENSOCUG00000013490	RRS1	81	65.101	Oryctolagus_cuniculus
ENSIPUG00000014412	rrs1	88	62.987	ENSOMEG00000008525	rrs1	84	63.300	Oryzias_melastigma
ENSIPUG00000014412	rrs1	100	58.726	ENSOGAG00000001085	RRS1	97	57.507	Otolemur_garnettii
ENSIPUG00000014412	rrs1	90	60.000	ENSOARG00000017417	RRS1	79	60.738	Ovis_aries
ENSIPUG00000014412	rrs1	89	65.064	ENSPPAG00000024378	RRS1	82	65.772	Pan_paniscus
ENSIPUG00000014412	rrs1	89	63.462	ENSPPRG00000021408	RRS1	82	64.667	Panthera_pardus
ENSIPUG00000014412	rrs1	89	64.744	ENSPTRG00000030988	RRS1	82	65.436	Pan_troglodytes
ENSIPUG00000014412	rrs1	98	43.575	ENSPANG00000035974	RRS1	78	47.811	Papio_anubis
ENSIPUG00000014412	rrs1	86	72.241	ENSPKIG00000007953	rrs1	86	72.881	Paramormyrops_kingsleyae
ENSIPUG00000014412	rrs1	94	63.333	ENSPEMG00000014427	Rrs1	82	65.101	Peromyscus_maniculatus_bairdii
ENSIPUG00000014412	rrs1	86	61.000	ENSPMAG00000006513	rrs1	79	61.538	Petromyzon_marinus
ENSIPUG00000014412	rrs1	87	64.706	ENSPCIG00000026695	RRS1	84	65.217	Phascolarctos_cinereus
ENSIPUG00000014412	rrs1	95	72.644	ENSPFOG00000020722	rrs1	97	73.041	Poecilia_formosa
ENSIPUG00000014412	rrs1	87	62.914	ENSPREG00000019960	rrs1	82	63.636	Poecilia_reticulata
ENSIPUG00000014412	rrs1	85	66.216	ENSPPYG00000018637	RRS1	99	66.216	Pongo_abelii
ENSIPUG00000014412	rrs1	94	63.939	ENSPCAG00000009115	RRS1	82	65.772	Procavia_capensis
ENSIPUG00000014412	rrs1	84	76.289	ENSPNAG00000021707	rrs1	90	72.785	Pygocentrus_nattereri
ENSIPUG00000014412	rrs1	98	58.242	ENSRNOG00000007240	Rrs1	82	64.430	Rattus_norvegicus
ENSIPUG00000014412	rrs1	89	65.064	ENSRBIG00000009132	RRS1	82	65.772	Rhinopithecus_bieti
ENSIPUG00000014412	rrs1	89	65.064	ENSRROG00000013472	RRS1	82	65.772	Rhinopithecus_roxellana
ENSIPUG00000014412	rrs1	51	38.614	YOR294W	-	99	38.614	Saccharomyces_cerevisiae
ENSIPUG00000014412	rrs1	87	64.474	ENSSBOG00000012639	-	84	65.436	Saimiri_boliviensis_boliviensis
ENSIPUG00000014412	rrs1	87	65.246	ENSSBOG00000011006	-	84	65.436	Saimiri_boliviensis_boliviensis
ENSIPUG00000014412	rrs1	84	57.732	ENSSFOG00015015772	rrs1	81	57.732	Scleropages_formosus
ENSIPUG00000014412	rrs1	85	74.237	ENSSMAG00000015226	rrs1	80	75.172	Scophthalmus_maximus
ENSIPUG00000014412	rrs1	89	46.154	ENSSARG00000006976	RRS1	63	64.602	Sorex_araneus
ENSIPUG00000014412	rrs1	89	65.385	ENSSSCG00000006214	RRS1	82	66.107	Sus_scrofa
ENSIPUG00000014412	rrs1	91	69.401	ENSTRUG00000008796	rrs1	87	73.333	Takifugu_rubripes
ENSIPUG00000014412	rrs1	85	74.074	ENSTNIG00000004026	rrs1	88	74.074	Tetraodon_nigroviridis
ENSIPUG00000014412	rrs1	89	64.103	ENSTBEG00000014752	RRS1	82	64.765	Tupaia_belangeri
ENSIPUG00000014412	rrs1	99	61.561	ENSUAMG00000008502	RRS1	82	64.765	Ursus_americanus
ENSIPUG00000014412	rrs1	89	64.423	ENSVVUG00000018452	RRS1	82	65.101	Vulpes_vulpes
ENSIPUG00000014412	rrs1	85	75.758	ENSXCOG00000009809	rrs1	89	72.727	Xiphophorus_couchianus