EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000014417 (Gene tree)
Gene ID: 108280714
Gene Symbol: GTPBP4
Alias: GTP binding protein NGB|fi28d07|wu:fi28d07|zgc:55757
Full Name: GTP binding protein 4
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 26518 bases
Position: chr20:11010603-11037120
Accession: 108280714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000021381	NOG1	PF06858.14	1.4e-27	1	1
ENSIPUP00000021346	NOG1	PF06858.14	1.6e-27	1	1
ENSIPUP00000021381	MMR_HSR1	PF01926.23	8.8e-20	1	1
ENSIPUP00000021346	MMR_HSR1	PF01926.23	8.8e-20	1	1
ENSIPUP00000021381	NOGCT	PF08155.11	7.9e-21	1	1
ENSIPUP00000021346	NOGCT	PF08155.11	8.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000022270	-	6746	XM_017496050	ENSIPUP00000021346	634 (aa)	XP_017351539	W5U9Q6
ENSIPUT00000022308	-	1815	-	ENSIPUP00000021381	604 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000014417's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000014417's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000014417	GTPBP4	100	83.596	ENSG00000107937	GTPBP4	100	95.714	Homo_sapiens
ENSIPUG00000014417	GTPBP4	100	87.697	ENSAPOG00000020433	gtpbp4	100	83.465	Acanthochromis_polyacanthus
ENSIPUG00000014417	GTPBP4	100	81.703	ENSAMEG00000001845	GTPBP4	100	81.703	Ailuropoda_melanoleuca
ENSIPUG00000014417	GTPBP4	100	87.417	ENSACIG00000018629	gtpbp4	100	87.417	Amphilophus_citrinellus
ENSIPUG00000014417	GTPBP4	100	87.855	ENSAOCG00000000427	gtpbp4	93	87.855	Amphiprion_ocellaris
ENSIPUG00000014417	GTPBP4	100	88.013	ENSAPEG00000002544	gtpbp4	100	88.013	Amphiprion_percula
ENSIPUG00000014417	GTPBP4	100	88.486	ENSATEG00000012635	gtpbp4	95	88.486	Anabas_testudineus
ENSIPUG00000014417	GTPBP4	52	74.320	ENSAPLG00000013790	-	100	74.320	Anas_platyrhynchos
ENSIPUG00000014417	GTPBP4	100	83.438	ENSACAG00000002943	GTPBP4	100	83.438	Anolis_carolinensis
ENSIPUG00000014417	GTPBP4	88	79.710	ENSANAG00000029209	-	100	79.710	Aotus_nancymaae
ENSIPUG00000014417	GTPBP4	98	72.540	ENSANAG00000022188	-	99	73.016	Aotus_nancymaae
ENSIPUG00000014417	GTPBP4	71	92.188	ENSACLG00000026330	gtpbp4	94	93.506	Astatotilapia_calliptera
ENSIPUG00000014417	GTPBP4	100	91.887	ENSAMXG00000019771	gtpbp4	100	91.887	Astyanax_mexicanus
ENSIPUG00000014417	GTPBP4	100	83.596	ENSBTAG00000014917	GTPBP4	100	83.596	Bos_taurus
ENSIPUG00000014417	GTPBP4	99	53.130	WBGene00020297	nog-1	99	53.130	Caenorhabditis_elegans
ENSIPUG00000014417	GTPBP4	100	83.019	ENSCJAG00000008494	-	100	83.176	Callithrix_jacchus
ENSIPUG00000014417	GTPBP4	100	82.390	ENSCJAG00000022962	-	100	82.390	Callithrix_jacchus
ENSIPUG00000014417	GTPBP4	93	81.601	ENSCAFG00000005536	GTPBP4	100	81.601	Canis_familiaris
ENSIPUG00000014417	GTPBP4	100	82.334	ENSCAFG00020004307	GTPBP4	100	82.334	Canis_lupus_dingo
ENSIPUG00000014417	GTPBP4	100	83.596	ENSCHIG00000018346	GTPBP4	100	83.596	Capra_hircus
ENSIPUG00000014417	GTPBP4	100	82.965	ENSTSYG00000004977	GTPBP4	100	82.965	Carlito_syrichta
ENSIPUG00000014417	GTPBP4	98	74.560	ENSCAPG00000002134	GTPBP4	97	74.560	Cavia_aperea
ENSIPUG00000014417	GTPBP4	100	82.492	ENSCPOG00000013736	GTPBP4	100	82.492	Cavia_porcellus
ENSIPUG00000014417	GTPBP4	99	83.860	ENSCCAG00000021627	-	92	84.027	Cebus_capucinus
ENSIPUG00000014417	GTPBP4	100	62.145	ENSCCAG00000030115	-	100	61.987	Cebus_capucinus
ENSIPUG00000014417	GTPBP4	100	83.609	ENSCATG00000004303	GTPBP4	100	83.609	Cercocebus_atys
ENSIPUG00000014417	GTPBP4	100	82.808	ENSCLAG00000011323	GTPBP4	100	82.808	Chinchilla_lanigera
ENSIPUG00000014417	GTPBP4	100	83.596	ENSCSAG00000014097	GTPBP4	100	83.596	Chlorocebus_sabaeus
ENSIPUG00000014417	GTPBP4	96	90.296	ENSCHOG00000012602	GTPBP4	88	90.296	Choloepus_hoffmanni
ENSIPUG00000014417	GTPBP4	100	83.281	ENSCPBG00000008398	GTPBP4	100	83.281	Chrysemys_picta_bellii
ENSIPUG00000014417	GTPBP4	100	63.027	ENSCING00000001957	-	100	63.495	Ciona_intestinalis
ENSIPUG00000014417	GTPBP4	100	64.012	ENSCSAVG00000009793	-	99	79.612	Ciona_savignyi
ENSIPUG00000014417	GTPBP4	100	79.906	ENSCANG00000014168	GTPBP4	100	79.906	Colobus_angolensis_palliatus
ENSIPUG00000014417	GTPBP4	100	83.281	ENSCGRG00001013765	Gtpbp4	100	83.281	Cricetulus_griseus_chok1gshd
ENSIPUG00000014417	GTPBP4	100	83.281	ENSCGRG00000012171	Gtpbp4	100	83.281	Cricetulus_griseus_crigri
ENSIPUG00000014417	GTPBP4	100	86.093	ENSCSEG00000007352	gtpbp4	100	86.093	Cynoglossus_semilaevis
ENSIPUG00000014417	GTPBP4	100	85.762	ENSCVAG00000008993	gtpbp4	100	85.762	Cyprinodon_variegatus
ENSIPUG00000014417	GTPBP4	100	90.379	ENSDARG00000018961	gtpbp4	100	90.379	Danio_rerio
ENSIPUG00000014417	GTPBP4	67	76.471	ENSDNOG00000006746	GTPBP4	100	76.471	Dasypus_novemcinctus
ENSIPUG00000014417	GTPBP4	82	95.238	ENSDORG00000010884	Gtpbp4	96	95.238	Dipodomys_ordii
ENSIPUG00000014417	GTPBP4	100	59.021	FBgn0028473	Non1	100	58.716	Drosophila_melanogaster
ENSIPUG00000014417	GTPBP4	74	81.671	ENSETEG00000016840	-	71	81.671	Echinops_telfairi
ENSIPUG00000014417	GTPBP4	98	66.443	ENSEBUG00000010311	gtpbp4	99	66.275	Eptatretus_burgeri
ENSIPUG00000014417	GTPBP4	100	81.861	ENSEASG00005019082	GTPBP4	100	81.861	Equus_asinus_asinus
ENSIPUG00000014417	GTPBP4	100	82.119	ENSECAG00000001700	GTPBP4	93	92.857	Equus_caballus
ENSIPUG00000014417	GTPBP4	100	88.679	ENSEEUG00000009889	GTPBP4	91	88.679	Erinaceus_europaeus
ENSIPUG00000014417	GTPBP4	100	86.006	ENSELUG00000008578	gtpbp4	100	85.155	Esox_lucius
ENSIPUG00000014417	GTPBP4	100	83.123	ENSFCAG00000026213	GTPBP4	100	83.123	Felis_catus
ENSIPUG00000014417	GTPBP4	99	81.646	ENSFALG00000006971	GTPBP4	87	83.123	Ficedula_albicollis
ENSIPUG00000014417	GTPBP4	100	82.965	ENSFDAG00000000998	GTPBP4	100	82.965	Fukomys_damarensis
ENSIPUG00000014417	GTPBP4	100	86.921	ENSFHEG00000012922	gtpbp4	100	86.921	Fundulus_heteroclitus
ENSIPUG00000014417	GTPBP4	100	85.489	ENSGMOG00000016090	gtpbp4	100	85.489	Gadus_morhua
ENSIPUG00000014417	GTPBP4	100	82.808	ENSGALG00000006703	GTPBP4	100	82.808	Gallus_gallus
ENSIPUG00000014417	GTPBP4	100	86.921	ENSGAFG00000002075	gtpbp4	100	86.921	Gambusia_affinis
ENSIPUG00000014417	GTPBP4	100	85.647	ENSGACG00000017481	gtpbp4	100	85.647	Gasterosteus_aculeatus
ENSIPUG00000014417	GTPBP4	93	82.624	ENSGAGG00000018689	GTPBP4	100	82.624	Gopherus_agassizii
ENSIPUG00000014417	GTPBP4	100	83.609	ENSGGOG00000013372	GTPBP4	100	83.609	Gorilla_gorilla
ENSIPUG00000014417	GTPBP4	100	88.328	ENSHBUG00000000192	gtpbp4	100	88.328	Haplochromis_burtoni
ENSIPUG00000014417	GTPBP4	100	82.650	ENSHGLG00000013071	GTPBP4	100	82.650	Heterocephalus_glaber_female
ENSIPUG00000014417	GTPBP4	100	82.650	ENSHGLG00100017850	GTPBP4	100	82.650	Heterocephalus_glaber_male
ENSIPUG00000014417	GTPBP4	100	75.748	ENSHGLG00100002964	-	100	75.748	Heterocephalus_glaber_male
ENSIPUG00000014417	GTPBP4	100	86.777	ENSHCOG00000011543	gtpbp4	100	86.777	Hippocampus_comes
ENSIPUG00000014417	GTPBP4	100	74.606	ENSSTOG00000023023	-	100	74.606	Ictidomys_tridecemlineatus
ENSIPUG00000014417	GTPBP4	100	82.965	ENSSTOG00000010042	-	100	82.965	Ictidomys_tridecemlineatus
ENSIPUG00000014417	GTPBP4	100	82.650	ENSJJAG00000010021	Gtpbp4	100	82.650	Jaculus_jaculus
ENSIPUG00000014417	GTPBP4	100	86.435	ENSKMAG00000021705	gtpbp4	100	86.435	Kryptolebias_marmoratus
ENSIPUG00000014417	GTPBP4	100	85.124	ENSLBEG00000021419	gtpbp4	100	85.124	Labrus_bergylta
ENSIPUG00000014417	GTPBP4	100	83.912	ENSLACG00000001449	GTPBP4	100	83.912	Latimeria_chalumnae
ENSIPUG00000014417	GTPBP4	100	86.308	ENSLOCG00000012279	gtpbp4	100	86.308	Lepisosteus_oculatus
ENSIPUG00000014417	GTPBP4	100	82.650	ENSLAFG00000018578	GTPBP4	100	82.650	Loxodonta_africana
ENSIPUG00000014417	GTPBP4	100	83.775	ENSMFAG00000046251	GTPBP4	100	83.775	Macaca_fascicularis
ENSIPUG00000014417	GTPBP4	100	80.915	ENSMMUG00000010813	GTPBP4	100	80.915	Macaca_mulatta
ENSIPUG00000014417	GTPBP4	100	83.609	ENSMNEG00000044366	GTPBP4	100	83.609	Macaca_nemestrina
ENSIPUG00000014417	GTPBP4	100	83.609	ENSMLEG00000039605	GTPBP4	100	83.609	Mandrillus_leucophaeus
ENSIPUG00000014417	GTPBP4	100	88.486	ENSMAMG00000013763	gtpbp4	92	88.486	Mastacembelus_armatus
ENSIPUG00000014417	GTPBP4	100	88.328	ENSMZEG00005006621	gtpbp4	100	88.328	Maylandia_zebra
ENSIPUG00000014417	GTPBP4	100	82.965	ENSMAUG00000000571	Gtpbp4	100	82.965	Mesocricetus_auratus
ENSIPUG00000014417	GTPBP4	100	83.113	ENSMICG00000013332	GTPBP4	100	83.113	Microcebus_murinus
ENSIPUG00000014417	GTPBP4	100	82.965	ENSMOCG00000002209	Gtpbp4	100	82.965	Microtus_ochrogaster
ENSIPUG00000014417	GTPBP4	100	87.417	ENSMMOG00000011257	gtpbp4	100	87.417	Mola_mola
ENSIPUG00000014417	GTPBP4	100	84.227	ENSMODG00000005978	GTPBP4	100	84.227	Monodelphis_domestica
ENSIPUG00000014417	GTPBP4	100	86.909	ENSMALG00000012488	gtpbp4	100	86.909	Monopterus_albus
ENSIPUG00000014417	GTPBP4	99	82.353	MGP_CAROLIEiJ_G0018215	Gtpbp4	99	82.194	Mus_caroli
ENSIPUG00000014417	GTPBP4	100	83.123	ENSMUSG00000021149	Gtpbp4	93	92.810	Mus_musculus
ENSIPUG00000014417	GTPBP4	100	83.123	MGP_PahariEiJ_G0019265	Gtpbp4	100	83.123	Mus_pahari
ENSIPUG00000014417	GTPBP4	99	83.625	MGP_SPRETEiJ_G0019073	Gtpbp4	99	83.625	Mus_spretus
ENSIPUG00000014417	GTPBP4	93	81.431	ENSMPUG00000016221	GTPBP4	100	81.431	Mustela_putorius_furo
ENSIPUG00000014417	GTPBP4	100	82.492	ENSMLUG00000028192	GTPBP4	100	82.492	Myotis_lucifugus
ENSIPUG00000014417	GTPBP4	100	83.596	ENSNGAG00000015364	Gtpbp4	100	83.596	Nannospalax_galili
ENSIPUG00000014417	GTPBP4	100	70.347	ENSNBRG00000019965	gtpbp4	100	70.505	Neolamprologus_brichardi
ENSIPUG00000014417	GTPBP4	100	83.609	ENSNLEG00000013495	GTPBP4	100	83.609	Nomascus_leucogenys
ENSIPUG00000014417	GTPBP4	64	84.848	ENSMEUG00000016215	-	67	84.848	Notamacropus_eugenii
ENSIPUG00000014417	GTPBP4	89	90.027	ENSOPRG00000008671	GTPBP4	86	90.027	Ochotona_princeps
ENSIPUG00000014417	GTPBP4	100	82.965	ENSODEG00000000962	-	100	82.965	Octodon_degus
ENSIPUG00000014417	GTPBP4	100	80.915	ENSODEG00000019152	-	100	80.915	Octodon_degus
ENSIPUG00000014417	GTPBP4	100	88.486	ENSONIG00000017707	gtpbp4	100	88.486	Oreochromis_niloticus
ENSIPUG00000014417	GTPBP4	99	81.171	ENSOANG00000006095	-	99	81.171	Ornithorhynchus_anatinus
ENSIPUG00000014417	GTPBP4	100	81.230	ENSOCUG00000016120	-	100	81.230	Oryctolagus_cuniculus
ENSIPUG00000014417	GTPBP4	59	80.211	ENSOCUG00000014716	-	100	80.211	Oryctolagus_cuniculus
ENSIPUG00000014417	GTPBP4	100	85.804	ENSORLG00000006151	gtpbp4	100	85.804	Oryzias_latipes
ENSIPUG00000014417	GTPBP4	100	85.804	ENSORLG00020020899	gtpbp4	100	85.804	Oryzias_latipes_hni
ENSIPUG00000014417	GTPBP4	100	85.647	ENSORLG00015020562	gtpbp4	100	85.647	Oryzias_latipes_hsok
ENSIPUG00000014417	GTPBP4	100	85.489	ENSOMEG00000019684	gtpbp4	100	85.489	Oryzias_melastigma
ENSIPUG00000014417	GTPBP4	100	83.438	ENSOGAG00000011941	GTPBP4	100	83.438	Otolemur_garnettii
ENSIPUG00000014417	GTPBP4	100	83.046	ENSOARG00000015047	GTPBP4	100	83.203	Ovis_aries
ENSIPUG00000014417	GTPBP4	100	83.775	ENSPPAG00000042066	GTPBP4	100	83.775	Pan_paniscus
ENSIPUG00000014417	GTPBP4	100	83.123	ENSPPRG00000009895	GTPBP4	100	83.123	Panthera_pardus
ENSIPUG00000014417	GTPBP4	100	83.281	ENSPTIG00000008569	GTPBP4	100	83.281	Panthera_tigris_altaica
ENSIPUG00000014417	GTPBP4	71	88.079	ENSPTRG00000002236	GTPBP4	87	88.079	Pan_troglodytes
ENSIPUG00000014417	GTPBP4	100	83.609	ENSPANG00000023543	GTPBP4	100	83.609	Papio_anubis
ENSIPUG00000014417	GTPBP4	100	87.224	ENSPKIG00000012301	gtpbp4	100	87.224	Paramormyrops_kingsleyae
ENSIPUG00000014417	GTPBP4	56	90.476	ENSPSIG00000005442	GTPBP4	93	90.476	Pelodiscus_sinensis
ENSIPUG00000014417	GTPBP4	100	83.754	ENSPMGG00000001462	gtpbp4	100	83.754	Periophthalmus_magnuspinnatus
ENSIPUG00000014417	GTPBP4	100	60.410	ENSPEMG00000012279	-	100	60.410	Peromyscus_maniculatus_bairdii
ENSIPUG00000014417	GTPBP4	100	82.808	ENSPEMG00000015091	-	100	82.808	Peromyscus_maniculatus_bairdii
ENSIPUG00000014417	GTPBP4	100	76.814	ENSPMAG00000000905	gtpbp4	100	76.814	Petromyzon_marinus
ENSIPUG00000014417	GTPBP4	100	83.281	ENSPCIG00000026082	GTPBP4	100	83.281	Phascolarctos_cinereus
ENSIPUG00000014417	GTPBP4	100	86.751	ENSPFOG00000000026	gtpbp4	100	86.751	Poecilia_formosa
ENSIPUG00000014417	GTPBP4	92	87.179	ENSPLAG00000002898	gtpbp4	97	87.307	Poecilia_latipinna
ENSIPUG00000014417	GTPBP4	100	87.086	ENSPMEG00000016422	gtpbp4	100	87.086	Poecilia_mexicana
ENSIPUG00000014417	GTPBP4	100	86.921	ENSPREG00000019870	gtpbp4	100	86.921	Poecilia_reticulata
ENSIPUG00000014417	GTPBP4	100	83.912	ENSPPYG00000002037	GTPBP4	100	83.912	Pongo_abelii
ENSIPUG00000014417	GTPBP4	54	90.667	ENSPCAG00000006152	-	50	90.667	Procavia_capensis
ENSIPUG00000014417	GTPBP4	100	78.233	ENSPCOG00000014382	-	100	78.233	Propithecus_coquereli
ENSIPUG00000014417	GTPBP4	97	78.862	ENSPCOG00000014602	-	100	78.699	Propithecus_coquereli
ENSIPUG00000014417	GTPBP4	91	92.361	ENSPVAG00000005882	GTPBP4	86	90.881	Pteropus_vampyrus
ENSIPUG00000014417	GTPBP4	100	81.954	ENSPNYG00000024251	gtpbp4	100	81.954	Pundamilia_nyererei
ENSIPUG00000014417	GTPBP4	100	92.550	ENSPNAG00000019977	gtpbp4	100	92.550	Pygocentrus_nattereri
ENSIPUG00000014417	GTPBP4	100	82.704	ENSRNOG00000016217	Gtpbp4	100	82.862	Rattus_norvegicus
ENSIPUG00000014417	GTPBP4	100	83.444	ENSRBIG00000028875	GTPBP4	100	83.444	Rhinopithecus_bieti
ENSIPUG00000014417	GTPBP4	100	83.444	ENSRROG00000030798	GTPBP4	100	83.444	Rhinopithecus_roxellana
ENSIPUG00000014417	GTPBP4	99	45.511	YPL093W	-	99	45.511	Saccharomyces_cerevisiae
ENSIPUG00000014417	GTPBP4	100	83.168	ENSSBOG00000028421	GTPBP4	100	83.168	Saimiri_boliviensis_boliviensis
ENSIPUG00000014417	GTPBP4	99	84.236	ENSSHAG00000014713	GTPBP4	94	84.236	Sarcophilus_harrisii
ENSIPUG00000014417	GTPBP4	100	88.411	ENSSFOG00015003167	gtpbp4	100	88.411	Scleropages_formosus
ENSIPUG00000014417	GTPBP4	100	85.647	ENSSMAG00000005863	gtpbp4	100	85.647	Scophthalmus_maximus
ENSIPUG00000014417	GTPBP4	100	88.013	ENSSDUG00000006534	gtpbp4	100	88.013	Seriola_dumerili
ENSIPUG00000014417	GTPBP4	100	88.013	ENSSLDG00000020688	gtpbp4	100	88.013	Seriola_lalandi_dorsalis
ENSIPUG00000014417	GTPBP4	64	96.040	ENSSARG00000003409	-	79	96.040	Sorex_araneus
ENSIPUG00000014417	GTPBP4	100	83.123	ENSSPUG00000002153	GTPBP4	100	83.123	Sphenodon_punctatus
ENSIPUG00000014417	GTPBP4	63	78.086	ENSSPAG00000014583	gtpbp4	100	78.086	Stegastes_partitus
ENSIPUG00000014417	GTPBP4	100	81.230	ENSSSCG00000028602	GTPBP4	100	81.230	Sus_scrofa
ENSIPUG00000014417	GTPBP4	99	81.051	ENSTGUG00000000820	GTPBP4	100	82.484	Taeniopygia_guttata
ENSIPUG00000014417	GTPBP4	100	85.099	ENSTRUG00000003900	gtpbp4	100	85.099	Takifugu_rubripes
ENSIPUG00000014417	GTPBP4	100	86.909	ENSTNIG00000007992	gtpbp4	100	86.909	Tetraodon_nigroviridis
ENSIPUG00000014417	GTPBP4	100	68.388	ENSTBEG00000003613	GTPBP4	100	68.388	Tupaia_belangeri
ENSIPUG00000014417	GTPBP4	100	77.344	ENSTTRG00000011163	GTPBP4	100	77.344	Tursiops_truncatus
ENSIPUG00000014417	GTPBP4	100	82.285	ENSUAMG00000013191	GTPBP4	100	82.285	Ursus_americanus
ENSIPUG00000014417	GTPBP4	93	81.090	ENSUMAG00000016138	GTPBP4	100	81.090	Ursus_maritimus
ENSIPUG00000014417	GTPBP4	100	82.334	ENSVVUG00000008608	GTPBP4	98	82.334	Vulpes_vulpes
ENSIPUG00000014417	GTPBP4	100	73.502	ENSXETG00000018097	gtpbp4	100	73.502	Xenopus_tropicalis
ENSIPUG00000014417	GTPBP4	100	79.906	ENSXCOG00000019953	gtpbp4	98	79.906	Xiphophorus_couchianus
ENSIPUG00000014417	GTPBP4	100	85.871	ENSXMAG00000006719	gtpbp4	100	85.871	Xiphophorus_maculatus