EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000014491 (Gene tree)
Gene ID: 108254856
Gene Symbol: rbm12
Alias: zgc:193560|zgc:193570
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 2685 bases
Position: chr21:19799252-19801936
Accession: 108254856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000021376	RRM_1	PF00076.22	1.3e-33	1	4
ENSIPUP00000021376	RRM_1	PF00076.22	1.3e-33	2	4
ENSIPUP00000021376	RRM_1	PF00076.22	1.3e-33	3	4
ENSIPUP00000021376	RRM_1	PF00076.22	1.3e-33	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000022303	-	2685	XM_017450227	ENSIPUP00000021376	894 (aa)	XP_017305716	A0A2D0PJY9

Gene Model

Click here to download ENSIPUG00000014491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000014491's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000014491	rbm12	55	65.957	ENSIPUG00000001167	RBM12B	83	65.957

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000014491	rbm12	100	60.893	ENSACIG00000011053	rbm12	100	61.211	Amphilophus_citrinellus
ENSIPUG00000014491	rbm12	100	61.270	ENSAOCG00000019579	rbm12	100	61.457	Amphiprion_ocellaris
ENSIPUG00000014491	rbm12	92	68.085	ENSACAG00000006330	RBM12	98	51.888	Anolis_carolinensis
ENSIPUG00000014491	rbm12	92	68.254	ENSCAFG00020005650	RBM12	100	53.061	Canis_lupus_dingo
ENSIPUG00000014491	rbm12	51	73.171	ENSCCAG00000035899	-	94	51.235	Cebus_capucinus
ENSIPUG00000014491	rbm12	100	79.888	ENSDARG00000100636	rbm12	100	78.659	Danio_rerio
ENSIPUG00000014491	rbm12	87	66.667	ENSDORG00000000606	-	88	54.574	Dipodomys_ordii
ENSIPUG00000014491	rbm12	58	76.577	ENSEBUG00000016806	rbm12	99	75.893	Eptatretus_burgeri
ENSIPUG00000014491	rbm12	90	68.254	ENSECAG00000021997	RBM12	100	52.285	Equus_caballus
ENSIPUG00000014491	rbm12	92	68.783	ENSFDAG00000014663	RBM12	100	52.991	Fukomys_damarensis
ENSIPUG00000014491	rbm12	100	59.023	ENSGACG00000004202	rbm12	98	59.597	Gasterosteus_aculeatus
ENSIPUG00000014491	rbm12	100	45.842	ENSJJAG00000009879	-	92	50.645	Jaculus_jaculus
ENSIPUG00000014491	rbm12	100	68.716	ENSLOCG00000018363	rbm12	100	70.684	Lepisosteus_oculatus
ENSIPUG00000014491	rbm12	65	79.365	ENSMAMG00000001497	rbm12	97	79.365	Mastacembelus_armatus
ENSIPUG00000014491	rbm12	67	48.843	ENSMICG00000029540	-	100	46.129	Microcebus_murinus
ENSIPUG00000014491	rbm12	100	59.027	ENSMMOG00000013495	rbm12	100	60.065	Mola_mola
ENSIPUG00000014491	rbm12	92	68.254	ENSMPUG00000017789	-	100	52.457	Mustela_putorius_furo
ENSIPUG00000014491	rbm12	92	67.725	ENSMLUG00000011217	RBM12	98	52.345	Myotis_lucifugus
ENSIPUG00000014491	rbm12	71	48.559	ENSOPRG00000005687	RBM12	68	57.496	Ochotona_princeps
ENSIPUG00000014491	rbm12	100	57.447	ENSOMEG00000008238	rbm12	100	59.101	Oryzias_melastigma
ENSIPUG00000014491	rbm12	83	64.242	ENSPFOG00000023551	rbm12	88	65.507	Poecilia_formosa
ENSIPUG00000014491	rbm12	92	68.783	ENSPCAG00000008653	RBM12	100	52.452	Procavia_capensis
ENSIPUG00000014491	rbm12	90	67.725	ENSPCOG00000023724	RBM12	98	52.620	Propithecus_coquereli
ENSIPUG00000014491	rbm12	92	68.254	ENSTTRG00000017035	RBM12	100	52.615	Tursiops_truncatus
ENSIPUG00000014491	rbm12	92	68.254	ENSUAMG00000010430	RBM12	100	52.503	Ursus_americanus
ENSIPUG00000014491	rbm12	76	68.254	ENSVPAG00000003812	RBM12	69	58.423	Vicugna_pacos
ENSIPUG00000014491	rbm12	100	48.778	ENSXETG00000033541	RBM12	100	49.147	Xenopus_tropicalis
ENSIPUG00000014491	rbm12	99	57.566	ENSXCOG00000014073	rbm12	99	58.017	Xiphophorus_couchianus