EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000014629 (Gene tree)
Gene ID: 108269866
Gene Symbol: fancm
Alias: -
Full Name: FA complementation group M
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 37758 bases
Position: chr9:5304777-5342534
Accession: 108269866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000021612	ResIII	PF04851.15	3.8e-19	1	1
ENSIPUP00000021578	ResIII	PF04851.15	5.2e-18	1	1
ENSIPUP00000021612	DEAD	PF00270.29	2.4e-19	1	1
ENSIPUP00000021578	DEAD	PF00270.29	2.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000022544	-	2383	-	ENSIPUP00000021612	402 (aa)	-	-
ENSIPUT00000022510	-	7901	XM_017475967	ENSIPUP00000021578	1982 (aa)	XP_017331456	A0A2D0RMS7

Gene Model

Click here to download ENSIPUG00000014629's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000014629's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000014629	fancm	88	56.742	ENSG00000187790	FANCM	98	57.969	Homo_sapiens
ENSIPUG00000014629	fancm	88	63.978	ENSAPOG00000014274	-	97	61.379	Acanthochromis_polyacanthus
ENSIPUG00000014629	fancm	72	69.759	ENSACIG00000005444	-	93	70.781	Amphilophus_citrinellus
ENSIPUG00000014629	fancm	63	71.815	ENSAOCG00000005964	-	100	72.263	Amphiprion_ocellaris
ENSIPUG00000014629	fancm	63	72.201	ENSAPEG00000018344	-	100	72.628	Amphiprion_percula
ENSIPUG00000014629	fancm	98	54.654	ENSATEG00000012412	-	93	56.919	Anabas_testudineus
ENSIPUG00000014629	fancm	88	54.930	ENSANAG00000025075	FANCM	60	46.592	Aotus_nancymaae
ENSIPUG00000014629	fancm	89	62.933	ENSACLG00000016008	-	96	54.378	Astatotilapia_calliptera
ENSIPUG00000014629	fancm	91	70.270	ENSAMXG00000020275	-	98	56.507	Astyanax_mexicanus
ENSIPUG00000014629	fancm	88	56.461	ENSBTAG00000002612	FANCM	95	56.750	Bos_taurus
ENSIPUG00000014629	fancm	88	56.461	ENSCJAG00000015945	FANCM	81	52.673	Callithrix_jacchus
ENSIPUG00000014629	fancm	88	55.618	ENSCAFG00000014062	FANCM	60	53.434	Canis_familiaris
ENSIPUG00000014629	fancm	88	55.618	ENSCAFG00020022069	-	99	57.687	Canis_lupus_dingo
ENSIPUG00000014629	fancm	88	57.584	ENSCHIG00000015176	FANCM	50	55.128	Capra_hircus
ENSIPUG00000014629	fancm	57	70.306	ENSTSYG00000036497	-	86	64.605	Carlito_syrichta
ENSIPUG00000014629	fancm	88	54.930	ENSCPOG00000001446	FANCM	70	54.343	Cavia_porcellus
ENSIPUG00000014629	fancm	88	56.180	ENSCCAG00000026593	FANCM	53	52.386	Cebus_capucinus
ENSIPUG00000014629	fancm	91	55.464	ENSCATG00000031379	FANCM	50	54.249	Cercocebus_atys
ENSIPUG00000014629	fancm	91	55.738	ENSCSAG00000015308	FANCM	50	54.249	Chlorocebus_sabaeus
ENSIPUG00000014629	fancm	85	59.647	ENSCPBG00000015089	FANCM	78	54.662	Chrysemys_picta_bellii
ENSIPUG00000014629	fancm	58	63.404	ENSCING00000002994	-	100	59.341	Ciona_intestinalis
ENSIPUG00000014629	fancm	88	54.085	ENSCGRG00001023573	Fancm	50	53.667	Cricetulus_griseus_chok1gshd
ENSIPUG00000014629	fancm	88	60.590	ENSCSEG00000002313	-	94	62.877	Cynoglossus_semilaevis
ENSIPUG00000014629	fancm	93	47.794	ENSCVAG00000015579	-	98	47.522	Cyprinodon_variegatus
ENSIPUG00000014629	fancm	60	79.675	ENSDARG00000112136	CABZ01079748.1	91	78.182	Danio_rerio
ENSIPUG00000014629	fancm	88	56.111	ENSDNOG00000007697	FANCM	69	54.492	Dasypus_novemcinctus
ENSIPUG00000014629	fancm	88	53.803	ENSETEG00000003360	FANCM	59	54.118	Echinops_telfairi
ENSIPUG00000014629	fancm	89	51.676	ENSEBUG00000014849	-	88	51.359	Eptatretus_burgeri
ENSIPUG00000014629	fancm	88	55.211	ENSEASG00005007781	FANCM	98	57.725	Equus_asinus_asinus
ENSIPUG00000014629	fancm	88	54.444	ENSECAG00000018694	FANCM	61	55.413	Equus_caballus
ENSIPUG00000014629	fancm	70	69.611	ENSELUG00000015761	-	98	50.610	Esox_lucius
ENSIPUG00000014629	fancm	88	55.899	ENSFCAG00000022146	-	98	58.616	Felis_catus
ENSIPUG00000014629	fancm	75	54.194	ENSFALG00000001703	FANCM	79	54.194	Ficedula_albicollis
ENSIPUG00000014629	fancm	88	54.366	ENSFDAG00000009043	FANCM	72	53.630	Fukomys_damarensis
ENSIPUG00000014629	fancm	89	62.334	ENSFHEG00000006371	-	96	62.500	Fundulus_heteroclitus
ENSIPUG00000014629	fancm	88	59.887	ENSGMOG00000002019	-	88	61.955	Gadus_morhua
ENSIPUG00000014629	fancm	56	68.889	ENSGALG00000031182	FANCM	62	57.838	Gallus_gallus
ENSIPUG00000014629	fancm	88	63.934	ENSGAFG00000002104	-	100	74.275	Gambusia_affinis
ENSIPUG00000014629	fancm	93	62.385	ENSGACG00000009448	-	90	62.385	Gasterosteus_aculeatus
ENSIPUG00000014629	fancm	91	56.011	ENSGGOG00000008546	FANCM	59	54.186	Gorilla_gorilla
ENSIPUG00000014629	fancm	89	63.467	ENSHBUG00000007085	-	96	54.371	Haplochromis_burtoni
ENSIPUG00000014629	fancm	88	54.902	ENSHGLG00000013787	FANCM	51	54.007	Heterocephalus_glaber_female
ENSIPUG00000014629	fancm	88	54.902	ENSHGLG00100006377	FANCM	51	54.007	Heterocephalus_glaber_male
ENSIPUG00000014629	fancm	88	62.360	ENSHCOG00000013769	-	99	62.849	Hippocampus_comes
ENSIPUG00000014629	fancm	88	62.162	ENSKMAG00000009391	-	99	61.005	Kryptolebias_marmoratus
ENSIPUG00000014629	fancm	88	63.686	ENSLBEG00000004982	-	98	47.763	Labrus_bergylta
ENSIPUG00000014629	fancm	88	56.620	ENSLACG00000007739	FANCM	75	56.177	Latimeria_chalumnae
ENSIPUG00000014629	fancm	88	66.301	ENSLOCG00000011318	FANCM	93	56.122	Lepisosteus_oculatus
ENSIPUG00000014629	fancm	88	56.742	ENSLAFG00000001136	FANCM	69	55.180	Loxodonta_africana
ENSIPUG00000014629	fancm	91	55.191	ENSMFAG00000000383	FANCM	50	54.249	Macaca_fascicularis
ENSIPUG00000014629	fancm	91	55.191	ENSMMUG00000016513	FANCM	50	54.249	Macaca_mulatta
ENSIPUG00000014629	fancm	91	55.313	ENSMNEG00000038659	FANCM	50	54.302	Macaca_nemestrina
ENSIPUG00000014629	fancm	99	55.217	ENSMAMG00000007087	-	93	56.399	Mastacembelus_armatus
ENSIPUG00000014629	fancm	89	63.200	ENSMZEG00005004644	-	96	54.363	Maylandia_zebra
ENSIPUG00000014629	fancm	76	54.098	ENSMAUG00000015450	Fancm	61	51.748	Mesocricetus_auratus
ENSIPUG00000014629	fancm	68	65.441	ENSMICG00000005811	FANCM	50	54.524	Microcebus_murinus
ENSIPUG00000014629	fancm	88	53.239	ENSMOCG00000008775	Fancm	70	54.079	Microtus_ochrogaster
ENSIPUG00000014629	fancm	87	48.919	ENSMMOG00000010215	-	99	47.050	Mola_mola
ENSIPUG00000014629	fancm	88	56.620	ENSMODG00000007334	FANCM	69	53.114	Monodelphis_domestica
ENSIPUG00000014629	fancm	88	62.264	ENSMALG00000013187	-	95	62.260	Monopterus_albus
ENSIPUG00000014629	fancm	88	54.648	MGP_CAROLIEiJ_G0017791	Fancm	69	53.458	Mus_caroli
ENSIPUG00000014629	fancm	88	54.930	ENSMUSG00000055884	Fancm	98	56.303	Mus_musculus
ENSIPUG00000014629	fancm	88	49.859	MGP_PahariEiJ_G0029547	Fancm	77	50.058	Mus_pahari
ENSIPUG00000014629	fancm	95	52.681	MGP_SPRETEiJ_G0018636	Fancm	77	52.214	Mus_spretus
ENSIPUG00000014629	fancm	88	55.337	ENSMPUG00000004849	FANCM	60	54.292	Mustela_putorius_furo
ENSIPUG00000014629	fancm	88	53.221	ENSMLUG00000006671	FANCM	50	54.089	Myotis_lucifugus
ENSIPUG00000014629	fancm	88	52.975	ENSNGAG00000017199	Fancm	67	55.627	Nannospalax_galili
ENSIPUG00000014629	fancm	57	76.856	ENSNBRG00000024095	-	99	71.747	Neolamprologus_brichardi
ENSIPUG00000014629	fancm	91	55.890	ENSNLEG00000004432	FANCM	59	54.366	Nomascus_leucogenys
ENSIPUG00000014629	fancm	75	54.785	ENSMEUG00000004977	-	51	49.002	Notamacropus_eugenii
ENSIPUG00000014629	fancm	90	63.962	ENSONIG00000003531	-	90	63.962	Oreochromis_niloticus
ENSIPUG00000014629	fancm	80	58.462	ENSOANG00000013997	FANCM	69	58.741	Ornithorhynchus_anatinus
ENSIPUG00000014629	fancm	88	56.056	ENSOCUG00000007539	FANCM	70	54.133	Oryctolagus_cuniculus
ENSIPUG00000014629	fancm	89	65.229	ENSORLG00000014503	-	99	47.341	Oryzias_latipes
ENSIPUG00000014629	fancm	89	64.420	ENSORLG00020013516	-	94	57.910	Oryzias_latipes_hni
ENSIPUG00000014629	fancm	89	65.405	ENSORLG00015012100	-	99	47.538	Oryzias_latipes_hsok
ENSIPUG00000014629	fancm	89	65.110	ENSOMEG00000010717	-	95	64.800	Oryzias_melastigma
ENSIPUG00000014629	fancm	69	64.029	ENSOGAG00000003015	FANCM	71	53.810	Otolemur_garnettii
ENSIPUG00000014629	fancm	88	57.584	ENSOARG00000009429	FANCM	50	54.959	Ovis_aries
ENSIPUG00000014629	fancm	91	56.011	ENSPPAG00000028944	FANCM	50	54.535	Pan_paniscus
ENSIPUG00000014629	fancm	88	57.303	ENSPPRG00000011952	-	98	58.956	Panthera_pardus
ENSIPUG00000014629	fancm	88	57.303	ENSPTIG00000018621	-	98	58.956	Panthera_tigris_altaica
ENSIPUG00000014629	fancm	91	55.464	ENSPTRG00000006307	FANCM	50	54.186	Pan_troglodytes
ENSIPUG00000014629	fancm	91	55.464	ENSPANG00000023200	FANCM	50	54.249	Papio_anubis
ENSIPUG00000014629	fancm	88	66.213	ENSPKIG00000000861	-	92	68.127	Paramormyrops_kingsleyae
ENSIPUG00000014629	fancm	57	78.261	ENSPMGG00000010830	-	99	72.963	Periophthalmus_magnuspinnatus
ENSIPUG00000014629	fancm	88	55.211	ENSPEMG00000005619	Fancm	51	52.098	Peromyscus_maniculatus_bairdii
ENSIPUG00000014629	fancm	75	49.007	ENSPMAG00000003340	-	100	50.662	Petromyzon_marinus
ENSIPUG00000014629	fancm	67	64.312	ENSPCIG00000005354	-	93	59.282	Phascolarctos_cinereus
ENSIPUG00000014629	fancm	84	69.722	ENSPFOG00000002008	-	79	69.722	Poecilia_formosa
ENSIPUG00000014629	fancm	88	63.539	ENSPLAG00000014164	-	99	48.363	Poecilia_latipinna
ENSIPUG00000014629	fancm	88	64.402	ENSPMEG00000010746	-	99	48.274	Poecilia_mexicana
ENSIPUG00000014629	fancm	88	61.892	ENSPREG00000019849	-	99	47.951	Poecilia_reticulata
ENSIPUG00000014629	fancm	91	56.011	ENSPPYG00000005781	FANCM	52	54.535	Pongo_abelii
ENSIPUG00000014629	fancm	88	38.936	ENSPCAG00000011363	-	55	47.989	Procavia_capensis
ENSIPUG00000014629	fancm	77	46.710	ENSPCOG00000014388	FANCM	56	53.411	Propithecus_coquereli
ENSIPUG00000014629	fancm	69	53.791	ENSPVAG00000015802	FANCM	56	55.235	Pteropus_vampyrus
ENSIPUG00000014629	fancm	57	77.293	ENSPNYG00000018775	-	99	72.119	Pundamilia_nyererei
ENSIPUG00000014629	fancm	99	58.955	ENSPNAG00000013558	-	100	58.566	Pygocentrus_nattereri
ENSIPUG00000014629	fancm	88	54.366	ENSRNOG00000056721	Fancm	77	52.375	Rattus_norvegicus
ENSIPUG00000014629	fancm	88	56.180	ENSRBIG00000011451	FANCM	59	54.239	Rhinopithecus_bieti
ENSIPUG00000014629	fancm	88	56.461	ENSRROG00000028917	FANCM	59	54.831	Rhinopithecus_roxellana
ENSIPUG00000014629	fancm	54	47.945	YIR002C	-	61	30.174	Saccharomyces_cerevisiae
ENSIPUG00000014629	fancm	88	56.461	ENSSBOG00000030882	FANCM	59	53.909	Saimiri_boliviensis_boliviensis
ENSIPUG00000014629	fancm	74	61.873	ENSSHAG00000000507	FANCM	70	53.380	Sarcophilus_harrisii
ENSIPUG00000014629	fancm	62	76.400	ENSSFOG00015017948	-	99	76.493	Scleropages_formosus
ENSIPUG00000014629	fancm	88	61.741	ENSSMAG00000019903	-	99	61.836	Scophthalmus_maximus
ENSIPUG00000014629	fancm	88	63.271	ENSSDUG00000016682	-	93	74.457	Seriola_dumerili
ENSIPUG00000014629	fancm	88	63.539	ENSSLDG00000003408	-	78	63.964	Seriola_lalandi_dorsalis
ENSIPUG00000014629	fancm	88	65.301	ENSSPAG00000016930	-	97	65.574	Stegastes_partitus
ENSIPUG00000014629	fancm	58	69.957	ENSTGUG00000013226	-	100	57.916	Taeniopygia_guttata
ENSIPUG00000014629	fancm	88	60.282	ENSTRUG00000009756	-	99	66.199	Takifugu_rubripes
ENSIPUG00000014629	fancm	88	60.112	ENSTNIG00000017277	-	100	47.206	Tetraodon_nigroviridis
ENSIPUG00000014629	fancm	88	55.337	ENSUMAG00000007704	-	96	59.659	Ursus_maritimus
ENSIPUG00000014629	fancm	88	55.618	ENSVVUG00000000357	FANCM	60	53.837	Vulpes_vulpes
ENSIPUG00000014629	fancm	67	67.658	ENSXETG00000003046	fancm	99	56.615	Xenopus_tropicalis
ENSIPUG00000014629	fancm	60	79.012	ENSXCOG00000004854	-	76	79.012	Xiphophorus_couchianus
ENSIPUG00000014629	fancm	88	64.499	ENSXMAG00000007702	-	99	48.788	Xiphophorus_maculatus