EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000014640 (Gene tree)
Gene ID: 108273164
Gene Symbol: srfbp1
Alias: fc54c06|wu:fc54c06|zgc:56062
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 5612 bases
Position: chr12:20588756-20594367
Accession: 108273164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000021588	BUD22	PF09073.10	9.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000022520	-	2795	XM_017482224	ENSIPUP00000021588	692 (aa)	XP_017337713	A0A2D0S4N4

Gene Model

Click here to download ENSIPUG00000014640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000014640's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000014640	srfbp1	89	57.778	ENSANAG00000022485	SRFBP1	91	60.800	Aotus_nancymaae
ENSIPUG00000014640	srfbp1	87	58.871	ENSBTAG00000014320	SRFBP1	86	58.871	Bos_taurus
ENSIPUG00000014640	srfbp1	89	57.778	ENSCJAG00000017177	SRFBP1	91	60.800	Callithrix_jacchus
ENSIPUG00000014640	srfbp1	88	56.818	ENSTSYG00000008630	-	86	59.200	Carlito_syrichta
ENSIPUG00000014640	srfbp1	50	34.975	ENSTSYG00000006869	-	68	36.697	Carlito_syrichta
ENSIPUG00000014640	srfbp1	88	58.268	ENSCLAG00000003630	SRFBP1	70	58.268	Chinchilla_lanigera
ENSIPUG00000014640	srfbp1	64	69.106	ENSCSEG00000011789	-	85	69.106	Cynoglossus_semilaevis
ENSIPUG00000014640	srfbp1	57	32.057	ENSDNOG00000017733	SRFBP1	51	34.653	Dasypus_novemcinctus
ENSIPUG00000014640	srfbp1	87	61.789	ENSEASG00005012421	SRFBP1	81	47.321	Equus_asinus_asinus
ENSIPUG00000014640	srfbp1	88	47.244	ENSEEUG00000011514	SRFBP1	81	47.244	Erinaceus_europaeus
ENSIPUG00000014640	srfbp1	74	64.655	ENSGMOG00000012729	-	76	64.407	Gadus_morhua
ENSIPUG00000014640	srfbp1	89	60.317	ENSGACG00000009055	-	63	62.295	Gasterosteus_aculeatus
ENSIPUG00000014640	srfbp1	63	56.250	ENSGAGG00000024915	SRFBP1	75	56.250	Gopherus_agassizii
ENSIPUG00000014640	srfbp1	89	58.209	ENSGGOG00000007725	SRFBP1	86	61.290	Gorilla_gorilla
ENSIPUG00000014640	srfbp1	88	62.044	ENSLBEG00000013924	-	81	67.213	Labrus_bergylta
ENSIPUG00000014640	srfbp1	97	45.673	ENSLOCG00000008772	SRFBP1	71	64.000	Lepisosteus_oculatus
ENSIPUG00000014640	srfbp1	61	61.290	ENSMODG00000013487	-	71	61.290	Monodelphis_domestica
ENSIPUG00000014640	srfbp1	87	63.433	ENSMALG00000001812	-	78	66.393	Monopterus_albus
ENSIPUG00000014640	srfbp1	86	54.264	ENSODEG00000007258	SRFBP1	83	58.261	Octodon_degus
ENSIPUG00000014640	srfbp1	71	49.315	ENSOANG00000010042	-	82	51.515	Ornithorhynchus_anatinus
ENSIPUG00000014640	srfbp1	71	62.097	ENSORLG00015000238	-	82	62.097	Oryzias_latipes_hsok
ENSIPUG00000014640	srfbp1	86	58.871	ENSOGAG00000032423	SRFBP1	71	58.871	Otolemur_garnettii
ENSIPUG00000014640	srfbp1	71	65.079	ENSPMGG00000001675	-	72	63.359	Periophthalmus_magnuspinnatus
ENSIPUG00000014640	srfbp1	92	60.127	ENSPREG00000017248	-	77	67.200	Poecilia_reticulata
ENSIPUG00000014640	srfbp1	89	58.209	ENSPPYG00000015714	SRFBP1	86	61.290	Pongo_abelii
ENSIPUG00000014640	srfbp1	88	69.925	ENSPNYG00000010355	-	86	70.635	Pundamilia_nyererei
ENSIPUG00000014640	srfbp1	94	49.102	ENSSBOG00000015464	-	82	60.000	Saimiri_boliviensis_boliviensis
ENSIPUG00000014640	srfbp1	91	53.947	ENSSARG00000010669	SRFBP1	71	59.677	Sorex_araneus
ENSIPUG00000014640	srfbp1	85	56.667	ENSSPUG00000009204	SRFBP1	68	55.932	Sphenodon_punctatus
ENSIPUG00000014640	srfbp1	87	61.290	ENSSSCG00000022656	SRFBP1	85	48.214	Sus_scrofa
ENSIPUG00000014640	srfbp1	87	69.919	ENSTNIG00000009267	-	74	69.919	Tetraodon_nigroviridis
ENSIPUG00000014640	srfbp1	87	62.097	ENSVVUG00000019178	SRFBP1	59	55.556	Vulpes_vulpes