EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000014798 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 32154 bases
Position: chr6:31156158-31188311
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000021830	zf-C2H2	PF00096.26	6.5e-20	1	4
ENSIPUP00000021830	zf-C2H2	PF00096.26	6.5e-20	2	4
ENSIPUP00000021830	zf-C2H2	PF00096.26	6.5e-20	3	4
ENSIPUP00000021830	zf-C2H2	PF00096.26	6.5e-20	4	4
ENSIPUP00000021830	zf-met	PF12874.7	0.00057	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000022769	-	1507	-	ENSIPUP00000021830	498 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000014798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000014798's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000014798	-	84	43.158	ENSIPUG00000024162	prdm4	51	43.158
ENSIPUG00000014798	-	100	60.741	ENSIPUG00000023513	-	89	60.741
ENSIPUG00000014798	-	87	63.492	ENSIPUG00000017575	-	97	60.563
ENSIPUG00000014798	-	59	59.155	ENSIPUG00000006916	-	97	59.155
ENSIPUG00000014798	-	50	53.200	ENSIPUG00000015294	-	91	55.556
ENSIPUG00000014798	-	52	67.778	ENSIPUG00000015468	-	89	68.056
ENSIPUG00000014798	-	51	57.246	ENSIPUG00000005733	-	76	57.246
ENSIPUG00000014798	-	63	54.930	ENSIPUG00000023761	-	90	54.930
ENSIPUG00000014798	-	95	58.451	ENSIPUG00000003011	-	99	58.451
ENSIPUG00000014798	-	73	42.857	ENSIPUG00000001248	prdm5	99	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000014798	-	63	52.663	ENSOANG00000005426	-	64	52.663	Ornithorhynchus_anatinus