EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000014810 (Gene tree)
Gene ID: 108268918
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 11564 bases
Position: chr8:2621063-2632626
Accession: 108268918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000021847	RNA_pol_L_2	PF13656.6	1.9e-28	1	1
ENSIPUP00000021847	RNA_pol_L	PF01193.24	3.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000022786	-	348	XM_017474262	ENSIPUP00000021847	115 (aa)	XP_017329751	W5UE64

Gene Model

Click here to download ENSIPUG00000014810's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03020	RNA polymerase	KEGG
ipu04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000014810's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000014810	polr1d	75	36.047	ENSIPUG00000023960	polr2j	73	36.047

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000014810	polr1d	95	71.560	ENSG00000186184	POLR1D	94	71.560	Homo_sapiens
ENSIPUG00000014810	polr1d	90	79.612	ENSAPOG00000021882	polr1d	96	79.612	Acanthochromis_polyacanthus
ENSIPUG00000014810	polr1d	95	70.642	ENSAMEG00000019095	POLR1D	87	70.642	Ailuropoda_melanoleuca
ENSIPUG00000014810	polr1d	100	76.724	ENSACIG00000013328	polr1d	100	76.724	Amphilophus_citrinellus
ENSIPUG00000014810	polr1d	95	80.734	ENSAOCG00000018500	polr1d	96	80.734	Amphiprion_ocellaris
ENSIPUG00000014810	polr1d	95	79.817	ENSAPEG00000009489	polr1d	96	79.817	Amphiprion_percula
ENSIPUG00000014810	polr1d	100	77.391	ENSATEG00000019322	polr1d	100	77.391	Anabas_testudineus
ENSIPUG00000014810	polr1d	94	69.444	ENSACAG00000015753	POLR1D	93	69.444	Anolis_carolinensis
ENSIPUG00000014810	polr1d	91	72.381	ENSANAG00000024486	POLR1D	79	72.381	Aotus_nancymaae
ENSIPUG00000014810	polr1d	100	79.130	ENSACLG00000023805	polr1d	100	79.130	Astatotilapia_calliptera
ENSIPUG00000014810	polr1d	100	86.087	ENSAMXG00000036118	polr1d	100	86.087	Astyanax_mexicanus
ENSIPUG00000014810	polr1d	97	66.379	ENSBTAG00000033252	-	87	66.379	Bos_taurus
ENSIPUG00000014810	polr1d	97	66.379	ENSBTAG00000008642	POLR1D	87	66.379	Bos_taurus
ENSIPUG00000014810	polr1d	70	41.250	WBGene00010230	rpac-19	56	41.250	Caenorhabditis_elegans
ENSIPUG00000014810	polr1d	91	73.333	ENSCJAG00000044669	POLR1D	79	73.333	Callithrix_jacchus
ENSIPUG00000014810	polr1d	91	72.381	ENSCAFG00000006755	POLR1D	79	72.381	Canis_familiaris
ENSIPUG00000014810	polr1d	97	67.241	ENSCHIG00000021910	POLR1D	87	67.241	Capra_hircus
ENSIPUG00000014810	polr1d	97	71.429	ENSTSYG00000026817	-	84	71.429	Carlito_syrichta
ENSIPUG00000014810	polr1d	91	63.551	ENSTSYG00000034852	-	88	63.551	Carlito_syrichta
ENSIPUG00000014810	polr1d	56	62.500	ENSCAPG00000006058	-	65	62.500	Cavia_aperea
ENSIPUG00000014810	polr1d	57	60.606	ENSCPOG00000030450	-	67	60.606	Cavia_porcellus
ENSIPUG00000014810	polr1d	91	73.333	ENSCCAG00000021349	-	79	73.333	Cebus_capucinus
ENSIPUG00000014810	polr1d	95	54.128	ENSCCAG00000020191	-	80	54.128	Cebus_capucinus
ENSIPUG00000014810	polr1d	94	62.037	ENSCATG00000022900	-	80	62.037	Cercocebus_atys
ENSIPUG00000014810	polr1d	91	73.333	ENSCATG00000030710	-	79	73.333	Cercocebus_atys
ENSIPUG00000014810	polr1d	91	73.333	ENSCLAG00000017623	POLR1D	85	73.333	Chinchilla_lanigera
ENSIPUG00000014810	polr1d	85	77.551	ENSCPBG00000004719	POLR1D	97	77.551	Chrysemys_picta_bellii
ENSIPUG00000014810	polr1d	97	67.857	ENSCANG00000037694	-	84	67.857	Colobus_angolensis_palliatus
ENSIPUG00000014810	polr1d	91	73.333	ENSCANG00000028632	-	79	73.333	Colobus_angolensis_palliatus
ENSIPUG00000014810	polr1d	91	74.286	ENSCGRG00001021251	Polr1d	79	74.286	Cricetulus_griseus_chok1gshd
ENSIPUG00000014810	polr1d	91	74.286	ENSCGRG00000011639	Polr1d	79	74.286	Cricetulus_griseus_crigri
ENSIPUG00000014810	polr1d	91	79.048	ENSCSEG00000018268	polr1d	92	79.630	Cynoglossus_semilaevis
ENSIPUG00000014810	polr1d	98	76.106	ENSCVAG00000018527	polr1d	99	76.106	Cyprinodon_variegatus
ENSIPUG00000014810	polr1d	90	79.612	ENSDARG00000037570	polr1d	92	79.612	Danio_rerio
ENSIPUG00000014810	polr1d	95	70.642	ENSDNOG00000046247	-	81	70.642	Dasypus_novemcinctus
ENSIPUG00000014810	polr1d	95	70.642	ENSDNOG00000043676	-	82	70.642	Dasypus_novemcinctus
ENSIPUG00000014810	polr1d	95	72.477	ENSDORG00000029155	Polr1d	82	72.477	Dipodomys_ordii
ENSIPUG00000014810	polr1d	79	46.154	FBgn0086447	l(2)37Cg	86	46.154	Drosophila_melanogaster
ENSIPUG00000014810	polr1d	95	71.560	ENSETEG00000012797	POLR1D	88	71.560	Echinops_telfairi
ENSIPUG00000014810	polr1d	84	68.041	ENSEBUG00000011748	polr1d	68	68.041	Eptatretus_burgeri
ENSIPUG00000014810	polr1d	92	71.698	ENSEASG00005022487	POLR1D	82	71.698	Equus_asinus_asinus
ENSIPUG00000014810	polr1d	95	70.642	ENSEEUG00000013144	POLR1D	88	70.642	Erinaceus_europaeus
ENSIPUG00000014810	polr1d	98	80.531	ENSELUG00000005105	rpac2	99	80.531	Esox_lucius
ENSIPUG00000014810	polr1d	95	70.642	ENSFCAG00000030162	POLR1D	82	70.642	Felis_catus
ENSIPUG00000014810	polr1d	87	75.000	ENSFALG00000011463	POLR1D	99	75.000	Ficedula_albicollis
ENSIPUG00000014810	polr1d	95	70.642	ENSFDAG00000004463	POLR1D	82	70.642	Fukomys_damarensis
ENSIPUG00000014810	polr1d	95	78.899	ENSFHEG00000015410	polr1d	95	78.899	Fundulus_heteroclitus
ENSIPUG00000014810	polr1d	60	68.116	ENSGALG00000007470	POLR1D	68	68.116	Gallus_gallus
ENSIPUG00000014810	polr1d	100	78.261	ENSGAFG00000001693	polr1d	100	78.261	Gambusia_affinis
ENSIPUG00000014810	polr1d	97	78.378	ENSGACG00000018585	polr1d	93	78.378	Gasterosteus_aculeatus
ENSIPUG00000014810	polr1d	97	74.775	ENSGAGG00000008503	POLR1D	97	74.775	Gopherus_agassizii
ENSIPUG00000014810	polr1d	91	73.333	ENSGGOG00000004235	POLR1D	79	73.333	Gorilla_gorilla
ENSIPUG00000014810	polr1d	100	79.130	ENSHBUG00000002111	polr1d	100	79.130	Haplochromis_burtoni
ENSIPUG00000014810	polr1d	95	70.642	ENSHGLG00000003202	POLR1D	82	70.642	Heterocephalus_glaber_female
ENSIPUG00000014810	polr1d	95	70.642	ENSHGLG00100009393	POLR1D	82	70.642	Heterocephalus_glaber_male
ENSIPUG00000014810	polr1d	95	74.312	ENSHCOG00000003258	polr1d	96	74.312	Hippocampus_comes
ENSIPUG00000014810	polr1d	91	73.333	ENSSTOG00000013877	POLR1D	79	73.333	Ictidomys_tridecemlineatus
ENSIPUG00000014810	polr1d	95	70.642	ENSJJAG00000022671	-	91	70.642	Jaculus_jaculus
ENSIPUG00000014810	polr1d	90	56.731	ENSJJAG00000021667	-	61	56.731	Jaculus_jaculus
ENSIPUG00000014810	polr1d	97	75.676	ENSKMAG00000015256	polr1d	97	75.676	Kryptolebias_marmoratus
ENSIPUG00000014810	polr1d	100	78.261	ENSLBEG00000015919	polr1d	100	78.261	Labrus_bergylta
ENSIPUG00000014810	polr1d	91	69.524	ENSLACG00000006810	POLR1D	88	69.524	Latimeria_chalumnae
ENSIPUG00000014810	polr1d	63	82.192	ENSLOCG00000014976	polr1d	99	82.192	Lepisosteus_oculatus
ENSIPUG00000014810	polr1d	90	74.038	ENSLAFG00000032290	POLR1D	78	74.038	Loxodonta_africana
ENSIPUG00000014810	polr1d	95	71.560	ENSMFAG00000045264	POLR1D	84	71.560	Macaca_fascicularis
ENSIPUG00000014810	polr1d	75	68.605	ENSMMUG00000041570	-	77	68.605	Macaca_mulatta
ENSIPUG00000014810	polr1d	95	71.560	ENSMMUG00000020386	POLR1D	94	71.560	Macaca_mulatta
ENSIPUG00000014810	polr1d	86	61.616	ENSMNEG00000038120	-	77	61.616	Macaca_nemestrina
ENSIPUG00000014810	polr1d	91	73.333	ENSMNEG00000008630	-	79	73.333	Macaca_nemestrina
ENSIPUG00000014810	polr1d	91	73.333	ENSMLEG00000041048	-	79	73.333	Mandrillus_leucophaeus
ENSIPUG00000014810	polr1d	97	62.500	ENSMLEG00000032251	-	83	62.500	Mandrillus_leucophaeus
ENSIPUG00000014810	polr1d	90	79.808	ENSMAMG00000014834	polr1d	96	79.808	Mastacembelus_armatus
ENSIPUG00000014810	polr1d	91	80.952	ENSMZEG00005006638	polr1d	92	80.952	Maylandia_zebra
ENSIPUG00000014810	polr1d	87	70.476	ENSMGAG00000005322	POLR1D	96	70.476	Meleagris_gallopavo
ENSIPUG00000014810	polr1d	91	74.286	ENSMAUG00000001946	Polr1d	79	74.286	Mesocricetus_auratus
ENSIPUG00000014810	polr1d	95	57.798	ENSMICG00000007349	-	81	57.798	Microcebus_murinus
ENSIPUG00000014810	polr1d	95	70.642	ENSMICG00000016883	-	82	70.642	Microcebus_murinus
ENSIPUG00000014810	polr1d	95	72.477	ENSMOCG00000021288	Polr1d	82	72.477	Microtus_ochrogaster
ENSIPUG00000014810	polr1d	100	79.130	ENSMMOG00000009605	polr1d	100	79.130	Mola_mola
ENSIPUG00000014810	polr1d	95	76.147	ENSMODG00000023881	POLR1D	96	76.147	Monodelphis_domestica
ENSIPUG00000014810	polr1d	100	73.913	ENSMALG00000010652	polr1d	100	73.913	Monopterus_albus
ENSIPUG00000014810	polr1d	88	74.257	MGP_CAROLIEiJ_G0028034	Polr1d	76	74.257	Mus_caroli
ENSIPUG00000014810	polr1d	95	69.725	ENSMUSG00000029642	Polr1d	82	69.725	Mus_musculus
ENSIPUG00000014810	polr1d	91	71.429	MGP_PahariEiJ_G0024600	Polr1d	79	71.429	Mus_pahari
ENSIPUG00000014810	polr1d	95	68.807	MGP_SPRETEiJ_G0029032	Polr1d	82	68.807	Mus_spretus
ENSIPUG00000014810	polr1d	97	63.393	ENSMLUG00000004118	-	84	63.393	Myotis_lucifugus
ENSIPUG00000014810	polr1d	91	71.429	ENSMLUG00000027169	-	79	71.429	Myotis_lucifugus
ENSIPUG00000014810	polr1d	90	74.038	ENSNGAG00000006014	Polr1d	90	74.038	Nannospalax_galili
ENSIPUG00000014810	polr1d	100	79.130	ENSNBRG00000020327	polr1d	100	79.130	Neolamprologus_brichardi
ENSIPUG00000014810	polr1d	91	73.333	ENSNLEG00000000358	POLR1D	79	73.333	Nomascus_leucogenys
ENSIPUG00000014810	polr1d	91	73.333	ENSODEG00000005294	-	79	73.333	Octodon_degus
ENSIPUG00000014810	polr1d	91	60.000	ENSODEG00000014801	-	76	60.000	Octodon_degus
ENSIPUG00000014810	polr1d	91	79.048	ENSOANG00000008708	-	97	79.048	Ornithorhynchus_anatinus
ENSIPUG00000014810	polr1d	95	70.642	ENSOCUG00000015706	POLR1D	67	70.642	Oryctolagus_cuniculus
ENSIPUG00000014810	polr1d	100	73.043	ENSORLG00000010257	polr1d	100	73.043	Oryzias_latipes
ENSIPUG00000014810	polr1d	100	73.043	ENSORLG00020000533	polr1d	77	73.043	Oryzias_latipes_hni
ENSIPUG00000014810	polr1d	100	73.913	ENSORLG00015013267	polr1d	75	73.913	Oryzias_latipes_hsok
ENSIPUG00000014810	polr1d	100	72.174	ENSOMEG00000014912	polr1d	76	72.174	Oryzias_melastigma
ENSIPUG00000014810	polr1d	95	70.642	ENSOGAG00000014601	POLR1D	82	70.642	Otolemur_garnettii
ENSIPUG00000014810	polr1d	100	65.833	ENSOARG00000017005	POLR1D	92	65.833	Ovis_aries
ENSIPUG00000014810	polr1d	95	71.560	ENSPPAG00000028138	POLR1D	82	71.560	Pan_paniscus
ENSIPUG00000014810	polr1d	95	70.642	ENSPPRG00000003381	POLR1D	82	70.642	Panthera_pardus
ENSIPUG00000014810	polr1d	95	70.642	ENSPTIG00000018137	POLR1D	82	70.642	Panthera_tigris_altaica
ENSIPUG00000014810	polr1d	91	73.333	ENSPTRG00000005734	POLR1D	79	73.333	Pan_troglodytes
ENSIPUG00000014810	polr1d	91	73.333	ENSPANG00000020259	-	79	73.333	Papio_anubis
ENSIPUG00000014810	polr1d	97	60.714	ENSPANG00000035051	-	83	60.714	Papio_anubis
ENSIPUG00000014810	polr1d	88	80.198	ENSPKIG00000021891	polr1d	100	61.417	Paramormyrops_kingsleyae
ENSIPUG00000014810	polr1d	97	74.775	ENSPSIG00000011822	POLR1D	86	74.775	Pelodiscus_sinensis
ENSIPUG00000014810	polr1d	95	66.055	ENSPMGG00000012998	POLR1D	80	66.055	Periophthalmus_magnuspinnatus
ENSIPUG00000014810	polr1d	95	75.229	ENSPMGG00000010359	polr1d	95	75.229	Periophthalmus_magnuspinnatus
ENSIPUG00000014810	polr1d	95	70.642	ENSPEMG00000006336	-	84	70.642	Peromyscus_maniculatus_bairdii
ENSIPUG00000014810	polr1d	100	57.391	ENSPMAG00000004228	polr1d	97	57.391	Petromyzon_marinus
ENSIPUG00000014810	polr1d	95	76.147	ENSPCIG00000001673	POLR1D	96	76.147	Phascolarctos_cinereus
ENSIPUG00000014810	polr1d	100	79.130	ENSPFOG00000023343	polr1d	100	79.130	Poecilia_formosa
ENSIPUG00000014810	polr1d	100	79.130	ENSPLAG00000009675	polr1d	100	79.130	Poecilia_latipinna
ENSIPUG00000014810	polr1d	100	79.130	ENSPMEG00000004628	polr1d	100	79.130	Poecilia_mexicana
ENSIPUG00000014810	polr1d	100	79.130	ENSPREG00000022032	polr1d	100	79.130	Poecilia_reticulata
ENSIPUG00000014810	polr1d	95	69.725	ENSPCOG00000028175	POLR1D	82	69.725	Propithecus_coquereli
ENSIPUG00000014810	polr1d	100	79.130	ENSPNYG00000000107	polr1d	100	79.130	Pundamilia_nyererei
ENSIPUG00000014810	polr1d	95	81.651	ENSPNAG00000001512	polr1d	96	79.825	Pygocentrus_nattereri
ENSIPUG00000014810	polr1d	91	73.333	ENSRBIG00000036378	-	79	73.333	Rhinopithecus_bieti
ENSIPUG00000014810	polr1d	97	67.857	ENSRBIG00000000336	-	84	67.857	Rhinopithecus_bieti
ENSIPUG00000014810	polr1d	91	73.333	ENSRROG00000042232	-	79	73.333	Rhinopithecus_roxellana
ENSIPUG00000014810	polr1d	97	68.750	ENSRROG00000026751	-	84	68.750	Rhinopithecus_roxellana
ENSIPUG00000014810	polr1d	79	52.747	YNL113W	RPC19	64	52.747	Saccharomyces_cerevisiae
ENSIPUG00000014810	polr1d	91	72.381	ENSSBOG00000028482	-	79	72.381	Saimiri_boliviensis_boliviensis
ENSIPUG00000014810	polr1d	78	73.333	ENSSBOG00000030146	-	66	73.333	Saimiri_boliviensis_boliviensis
ENSIPUG00000014810	polr1d	94	75.000	ENSSHAG00000001190	POLR1D	84	75.000	Sarcophilus_harrisii
ENSIPUG00000014810	polr1d	97	77.477	ENSSFOG00015011375	polr1d	97	77.477	Scleropages_formosus
ENSIPUG00000014810	polr1d	100	78.261	ENSSMAG00000011861	polr1d	100	78.261	Scophthalmus_maximus
ENSIPUG00000014810	polr1d	100	77.391	ENSSDUG00000011930	polr1d	100	77.391	Seriola_dumerili
ENSIPUG00000014810	polr1d	90	79.612	ENSSLDG00000023871	polr1d	86	79.612	Seriola_lalandi_dorsalis
ENSIPUG00000014810	polr1d	91	72.381	ENSSARG00000007840	POLR1D	79	72.381	Sorex_araneus
ENSIPUG00000014810	polr1d	91	73.333	ENSSPUG00000005786	POLR1D	95	69.369	Sphenodon_punctatus
ENSIPUG00000014810	polr1d	100	80.000	ENSSPAG00000011764	polr1d	100	80.000	Stegastes_partitus
ENSIPUG00000014810	polr1d	91	70.476	ENSSSCG00000009310	POLR1D	79	70.476	Sus_scrofa
ENSIPUG00000014810	polr1d	83	76.042	ENSTGUG00000005450	POLR1D	100	76.042	Taeniopygia_guttata
ENSIPUG00000014810	polr1d	93	74.766	ENSTRUG00000019741	polr1d	94	74.766	Takifugu_rubripes
ENSIPUG00000014810	polr1d	95	69.725	ENSTBEG00000007006	POLR1D	88	69.725	Tupaia_belangeri
ENSIPUG00000014810	polr1d	91	72.381	ENSUAMG00000011413	POLR1D	79	72.381	Ursus_americanus
ENSIPUG00000014810	polr1d	95	70.642	ENSUMAG00000016968	POLR1D	85	70.642	Ursus_maritimus
ENSIPUG00000014810	polr1d	91	72.381	ENSVVUG00000009216	POLR1D	79	72.381	Vulpes_vulpes
ENSIPUG00000014810	polr1d	89	83.333	ENSXCOG00000011731	polr1d	78	83.333	Xiphophorus_couchianus
ENSIPUG00000014810	polr1d	89	83.333	ENSXMAG00000017538	polr1d	78	83.333	Xiphophorus_maculatus