EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000014946 (Gene tree)
Gene ID: 108276445
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 11127 bases
Position: chr15:23229794-23240920
Accession: 108276445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000022051	FDF	PF09532.10	5e-17	1	1
ENSIPUP00000022051	SM-ATX	PF14438.6	3e-08	1	1
ENSIPUP00000022051	LSM14	PF12701.7	1.2e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000022998	-	6246	XM_017488122	ENSIPUP00000022051	406 (aa)	XP_017343611	A0A2D0SM87

Gene Model

Click here to download ENSIPUG00000014946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000014946's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000014946	lsm14b	86	49.728	ENSIPUG00000022820	lsm14aa	83	48.767
ENSIPUG00000014946	lsm14b	86	46.231	ENSIPUG00000009720	lsm14a	82	45.337

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000014946	lsm14b	87	62.291	ENSG00000149657	LSM14B	100	58.472	Homo_sapiens
ENSIPUG00000014946	lsm14b	94	60.465	ENSAPOG00000001780	lsm14b	91	61.453	Acanthochromis_polyacanthus
ENSIPUG00000014946	lsm14b	94	55.140	ENSAMEG00000013430	LSM14B	91	54.731	Ailuropoda_melanoleuca
ENSIPUG00000014946	lsm14b	86	58.640	ENSACIG00000012266	lsm14b	90	59.207	Amphilophus_citrinellus
ENSIPUG00000014946	lsm14b	59	44.444	ENSACIG00000003147	LSM14B	87	43.460	Amphilophus_citrinellus
ENSIPUG00000014946	lsm14b	91	54.026	ENSAOCG00000006667	LSM14B	91	53.039	Amphiprion_ocellaris
ENSIPUG00000014946	lsm14b	85	62.606	ENSAOCG00000012380	lsm14b	91	61.944	Amphiprion_ocellaris
ENSIPUG00000014946	lsm14b	94	56.736	ENSAPEG00000023633	lsm14b	89	58.286	Amphiprion_percula
ENSIPUG00000014946	lsm14b	85	61.254	ENSATEG00000016603	lsm14b	90	61.032	Anabas_testudineus
ENSIPUG00000014946	lsm14b	65	48.485	ENSATEG00000015895	LSM14B	87	45.862	Anabas_testudineus
ENSIPUG00000014946	lsm14b	79	51.892	ENSAPLG00000013203	LSM14B	91	52.486	Anas_platyrhynchos
ENSIPUG00000014946	lsm14b	95	61.194	ENSACAG00000016195	LSM14B	99	61.809	Anolis_carolinensis
ENSIPUG00000014946	lsm14b	87	62.117	ENSANAG00000037915	LSM14B	90	61.864	Aotus_nancymaae
ENSIPUG00000014946	lsm14b	94	61.069	ENSACLG00000019663	lsm14b	90	59.664	Astatotilapia_calliptera
ENSIPUG00000014946	lsm14b	95	78.643	ENSAMXG00000002865	lsm14b	100	78.589	Astyanax_mexicanus
ENSIPUG00000014946	lsm14b	95	55.814	ENSBTAG00000021558	LSM14B	91	55.980	Bos_taurus
ENSIPUG00000014946	lsm14b	87	61.035	ENSCJAG00000014434	LSM14B	90	60.773	Callithrix_jacchus
ENSIPUG00000014946	lsm14b	85	52.699	ENSCAFG00000012518	LSM14B	89	51.989	Canis_familiaris
ENSIPUG00000014946	lsm14b	95	55.478	ENSCAFG00020022150	LSM14B	90	62.040	Canis_lupus_dingo
ENSIPUG00000014946	lsm14b	94	47.059	ENSCHIG00000022681	-	90	48.442	Capra_hircus
ENSIPUG00000014946	lsm14b	87	61.281	ENSCHIG00000010284	-	90	61.864	Capra_hircus
ENSIPUG00000014946	lsm14b	77	58.228	ENSTSYG00000031914	LSM14B	79	57.878	Carlito_syrichta
ENSIPUG00000014946	lsm14b	77	56.962	ENSCAPG00000013059	LSM14B	89	56.592	Cavia_aperea
ENSIPUG00000014946	lsm14b	77	57.143	ENSCPOG00000038080	LSM14B	89	56.774	Cavia_porcellus
ENSIPUG00000014946	lsm14b	87	62.117	ENSCCAG00000021267	LSM14B	90	61.864	Cebus_capucinus
ENSIPUG00000014946	lsm14b	87	43.944	ENSCCAG00000024900	-	76	44.022	Cebus_capucinus
ENSIPUG00000014946	lsm14b	87	62.291	ENSCATG00000036006	LSM14B	90	62.040	Cercocebus_atys
ENSIPUG00000014946	lsm14b	77	58.544	ENSCLAG00000003186	LSM14B	89	58.199	Chinchilla_lanigera
ENSIPUG00000014946	lsm14b	87	55.919	ENSCSAG00000015729	LSM14B	91	55.612	Chlorocebus_sabaeus
ENSIPUG00000014946	lsm14b	65	36.237	ENSCHOG00000006997	-	86	32.677	Choloepus_hoffmanni
ENSIPUG00000014946	lsm14b	87	57.000	ENSCPBG00000027065	LSM14B	91	57.252	Chrysemys_picta_bellii
ENSIPUG00000014946	lsm14b	77	58.413	ENSCANG00000036986	LSM14B	89	58.065	Colobus_angolensis_palliatus
ENSIPUG00000014946	lsm14b	95	60.769	ENSCGRG00001018399	Lsm14b	90	61.190	Cricetulus_griseus_chok1gshd
ENSIPUG00000014946	lsm14b	58	46.209	ENSCGRG00000006111	-	90	45.588	Cricetulus_griseus_crigri
ENSIPUG00000014946	lsm14b	52	46.977	ENSCGRG00000002484	-	83	41.429	Cricetulus_griseus_crigri
ENSIPUG00000014946	lsm14b	86	59.104	ENSCSEG00000004722	lsm14b	91	58.127	Cynoglossus_semilaevis
ENSIPUG00000014946	lsm14b	91	49.231	ENSCSEG00000020669	LSM14B	91	48.378	Cynoglossus_semilaevis
ENSIPUG00000014946	lsm14b	62	40.613	ENSCVAG00000012433	-	89	37.247	Cyprinodon_variegatus
ENSIPUG00000014946	lsm14b	87	66.389	ENSDARG00000025386	lsm14b	91	66.949	Danio_rerio
ENSIPUG00000014946	lsm14b	58	47.122	ENSDNOG00000025246	LSM14B	88	46.520	Dasypus_novemcinctus
ENSIPUG00000014946	lsm14b	85	56.857	ENSDORG00000016683	Lsm14b	88	56.857	Dipodomys_ordii
ENSIPUG00000014946	lsm14b	54	50.228	ENSETEG00000011188	-	100	48.936	Echinops_telfairi
ENSIPUG00000014946	lsm14b	88	50.546	ENSETEG00000001869	-	89	48.000	Echinops_telfairi
ENSIPUG00000014946	lsm14b	58	47.899	ENSEASG00005023218	LSM14B	88	45.588	Equus_asinus_asinus
ENSIPUG00000014946	lsm14b	87	60.615	ENSECAG00000010659	LSM14B	90	61.190	Equus_caballus
ENSIPUG00000014946	lsm14b	55	68.000	ENSEEUG00000007331	LSM14B	78	71.000	Erinaceus_europaeus
ENSIPUG00000014946	lsm14b	86	58.807	ENSELUG00000016299	LSM14B	91	58.807	Esox_lucius
ENSIPUG00000014946	lsm14b	95	68.299	ENSELUG00000005780	lsm14b	91	68.182	Esox_lucius
ENSIPUG00000014946	lsm14b	87	61.173	ENSFCAG00000003248	LSM14B	90	61.756	Felis_catus
ENSIPUG00000014946	lsm14b	77	52.198	ENSFALG00000010618	LSM14B	90	52.676	Ficedula_albicollis
ENSIPUG00000014946	lsm14b	77	57.778	ENSFDAG00000002214	LSM14B	89	57.419	Fukomys_damarensis
ENSIPUG00000014946	lsm14b	86	57.183	ENSFHEG00000006237	lsm14b	90	53.482	Fundulus_heteroclitus
ENSIPUG00000014946	lsm14b	76	49.383	ENSFHEG00000003362	LSM14B	86	49.275	Fundulus_heteroclitus
ENSIPUG00000014946	lsm14b	95	58.974	ENSGMOG00000017115	lsm14b	100	56.923	Gadus_morhua
ENSIPUG00000014946	lsm14b	87	59.459	ENSGALG00000005125	LSM14B	90	61.281	Gallus_gallus
ENSIPUG00000014946	lsm14b	62	45.635	ENSGAFG00000013723	LSM14B	85	40.693	Gambusia_affinis
ENSIPUG00000014946	lsm14b	85	54.444	ENSGAFG00000020318	lsm14b	91	51.771	Gambusia_affinis
ENSIPUG00000014946	lsm14b	87	61.560	ENSGACG00000009973	lsm14b	91	61.127	Gasterosteus_aculeatus
ENSIPUG00000014946	lsm14b	52	55.455	ENSGAGG00000004106	LSM14B	77	55.610	Gopherus_agassizii
ENSIPUG00000014946	lsm14b	78	57.944	ENSGGOG00000005630	LSM14B	85	57.595	Gorilla_gorilla
ENSIPUG00000014946	lsm14b	87	60.894	ENSHGLG00000015055	LSM14B	90	60.623	Heterocephalus_glaber_female
ENSIPUG00000014946	lsm14b	77	55.873	ENSHGLG00100015273	LSM14B	89	55.484	Heterocephalus_glaber_male
ENSIPUG00000014946	lsm14b	91	51.989	ENSHCOG00000018747	LSM14B	92	51.261	Hippocampus_comes
ENSIPUG00000014946	lsm14b	58	45.643	ENSHCOG00000004867	lsm14b	87	42.387	Hippocampus_comes
ENSIPUG00000014946	lsm14b	77	57.460	ENSSTOG00000020482	LSM14B	89	57.097	Ictidomys_tridecemlineatus
ENSIPUG00000014946	lsm14b	86	61.756	ENSJJAG00000012728	Lsm14b	89	61.494	Jaculus_jaculus
ENSIPUG00000014946	lsm14b	85	60.571	ENSKMAG00000017524	lsm14b	90	60.000	Kryptolebias_marmoratus
ENSIPUG00000014946	lsm14b	50	50.239	ENSKMAG00000012834	-	86	47.343	Kryptolebias_marmoratus
ENSIPUG00000014946	lsm14b	63	43.750	ENSLBEG00000007951	LSM14B	84	35.470	Labrus_bergylta
ENSIPUG00000014946	lsm14b	85	57.360	ENSLACG00000003849	LSM14B	91	57.398	Latimeria_chalumnae
ENSIPUG00000014946	lsm14b	95	68.367	ENSLOCG00000003746	lsm14b	100	67.949	Lepisosteus_oculatus
ENSIPUG00000014946	lsm14b	78	59.006	ENSLAFG00000007492	LSM14B	89	57.778	Loxodonta_africana
ENSIPUG00000014946	lsm14b	87	62.011	ENSMFAG00000041479	LSM14B	90	61.756	Macaca_fascicularis
ENSIPUG00000014946	lsm14b	87	62.011	ENSMMUG00000014084	LSM14B	90	61.756	Macaca_mulatta
ENSIPUG00000014946	lsm14b	87	62.011	ENSMNEG00000045573	LSM14B	90	61.756	Macaca_nemestrina
ENSIPUG00000014946	lsm14b	77	58.730	ENSMLEG00000040895	LSM14B	89	58.387	Mandrillus_leucophaeus
ENSIPUG00000014946	lsm14b	85	62.784	ENSMAMG00000020539	lsm14b	90	62.784	Mastacembelus_armatus
ENSIPUG00000014946	lsm14b	94	55.556	ENSMAMG00000024124	LSM14B	91	53.561	Mastacembelus_armatus
ENSIPUG00000014946	lsm14b	94	60.814	ENSMZEG00005000987	lsm14b	90	59.664	Maylandia_zebra
ENSIPUG00000014946	lsm14b	86	51.220	ENSMZEG00005026001	LSM14B	93	51.934	Maylandia_zebra
ENSIPUG00000014946	lsm14b	79	54.006	ENSMGAG00000005300	LSM14B	90	54.683	Meleagris_gallopavo
ENSIPUG00000014946	lsm14b	94	60.465	ENSMAUG00000020700	Lsm14b	90	60.857	Mesocricetus_auratus
ENSIPUG00000014946	lsm14b	87	62.117	ENSMICG00000014675	LSM14B	90	61.864	Microcebus_murinus
ENSIPUG00000014946	lsm14b	95	60.614	ENSMOCG00000020600	Lsm14b	90	61.017	Microtus_ochrogaster
ENSIPUG00000014946	lsm14b	58	42.182	ENSMOCG00000005119	-	91	42.222	Microtus_ochrogaster
ENSIPUG00000014946	lsm14b	87	55.182	ENSMMOG00000017321	LSM14B	90	52.691	Mola_mola
ENSIPUG00000014946	lsm14b	85	57.260	ENSMMOG00000020042	lsm14b	93	57.260	Mola_mola
ENSIPUG00000014946	lsm14b	58	48.921	ENSMODG00000016690	LSM14B	88	48.352	Monodelphis_domestica
ENSIPUG00000014946	lsm14b	94	60.052	ENSMALG00000004783	lsm14b	90	58.621	Monopterus_albus
ENSIPUG00000014946	lsm14b	87	52.174	ENSMALG00000022251	LSM14B	91	52.762	Monopterus_albus
ENSIPUG00000014946	lsm14b	95	60.000	MGP_CAROLIEiJ_G0024770	Lsm14b	90	60.340	Mus_caroli
ENSIPUG00000014946	lsm14b	95	60.000	ENSMUSG00000039108	Lsm14b	90	60.340	Mus_musculus
ENSIPUG00000014946	lsm14b	95	59.744	MGP_PahariEiJ_G0026214	Lsm14b	90	60.057	Mus_pahari
ENSIPUG00000014946	lsm14b	95	60.000	MGP_SPRETEiJ_G0025693	Lsm14b	90	60.340	Mus_spretus
ENSIPUG00000014946	lsm14b	82	50.400	ENSMPUG00000007584	LSM14B	91	50.270	Mustela_putorius_furo
ENSIPUG00000014946	lsm14b	86	62.890	ENSMLUG00000000304	LSM14B	90	63.173	Myotis_lucifugus
ENSIPUG00000014946	lsm14b	57	51.709	ENSNGAG00000016550	Lsm14b	84	51.269	Nannospalax_galili
ENSIPUG00000014946	lsm14b	84	58.213	ENSNLEG00000015757	LSM14B	100	58.213	Nomascus_leucogenys
ENSIPUG00000014946	lsm14b	64	77.143	ENSMEUG00000008267	-	65	77.622	Notamacropus_eugenii
ENSIPUG00000014946	lsm14b	87	61.453	ENSODEG00000004099	LSM14B	90	61.190	Octodon_degus
ENSIPUG00000014946	lsm14b	94	60.925	ENSONIG00000020318	lsm14b	90	60.623	Oreochromis_niloticus
ENSIPUG00000014946	lsm14b	67	57.299	ENSOANG00000003370	LSM14B	97	56.250	Ornithorhynchus_anatinus
ENSIPUG00000014946	lsm14b	77	56.782	ENSOCUG00000006279	LSM14B	89	56.410	Oryctolagus_cuniculus
ENSIPUG00000014946	lsm14b	88	48.774	ENSORLG00000028353	LSM14B	91	47.383	Oryzias_latipes
ENSIPUG00000014946	lsm14b	86	53.476	ENSORLG00000013525	lsm14b	91	56.712	Oryzias_latipes
ENSIPUG00000014946	lsm14b	59	36.226	ENSORLG00020018191	-	85	33.716	Oryzias_latipes_hni
ENSIPUG00000014946	lsm14b	86	57.143	ENSORLG00020020553	lsm14b	91	58.028	Oryzias_latipes_hni
ENSIPUG00000014946	lsm14b	88	48.907	ENSORLG00015013157	LSM14B	91	47.514	Oryzias_latipes_hsok
ENSIPUG00000014946	lsm14b	86	57.143	ENSORLG00015016862	lsm14b	91	58.028	Oryzias_latipes_hsok
ENSIPUG00000014946	lsm14b	86	56.863	ENSOMEG00000023917	lsm14b	91	56.338	Oryzias_melastigma
ENSIPUG00000014946	lsm14b	61	37.903	ENSOMEG00000000171	-	83	36.596	Oryzias_melastigma
ENSIPUG00000014946	lsm14b	87	55.919	ENSOGAG00000003915	LSM14B	91	55.612	Otolemur_garnettii
ENSIPUG00000014946	lsm14b	86	51.899	ENSOARG00000014706	LSM14B	88	51.567	Ovis_aries
ENSIPUG00000014946	lsm14b	78	57.944	ENSPPAG00000035799	LSM14B	85	57.595	Pan_paniscus
ENSIPUG00000014946	lsm14b	87	61.453	ENSPPRG00000009197	LSM14B	90	62.040	Panthera_pardus
ENSIPUG00000014946	lsm14b	58	48.739	ENSPTIG00000021518	LSM14B	91	46.691	Panthera_tigris_altaica
ENSIPUG00000014946	lsm14b	87	62.291	ENSPTRG00000013696	LSM14B	90	62.040	Pan_troglodytes
ENSIPUG00000014946	lsm14b	87	62.011	ENSPANG00000011747	LSM14B	90	61.756	Papio_anubis
ENSIPUG00000014946	lsm14b	95	73.247	ENSPKIG00000003275	lsm14b	88	93.684	Paramormyrops_kingsleyae
ENSIPUG00000014946	lsm14b	85	60.000	ENSPSIG00000014762	LSM14B	89	59.177	Pelodiscus_sinensis
ENSIPUG00000014946	lsm14b	94	60.881	ENSPEMG00000017688	Lsm14b	90	61.318	Peromyscus_maniculatus_bairdii
ENSIPUG00000014946	lsm14b	86	63.202	ENSPCIG00000013405	LSM14B	90	63.277	Phascolarctos_cinereus
ENSIPUG00000014946	lsm14b	94	57.106	ENSPFOG00000005631	lsm14b	91	55.402	Poecilia_formosa
ENSIPUG00000014946	lsm14b	85	51.989	ENSPLAG00000005793	LSM14B	90	50.284	Poecilia_latipinna
ENSIPUG00000014946	lsm14b	94	57.106	ENSPLAG00000002449	lsm14b	91	55.068	Poecilia_latipinna
ENSIPUG00000014946	lsm14b	86	58.028	ENSPMEG00000000745	lsm14b	91	55.068	Poecilia_mexicana
ENSIPUG00000014946	lsm14b	85	51.841	ENSPMEG00000022953	LSM14B	90	51.136	Poecilia_mexicana
ENSIPUG00000014946	lsm14b	59	40.154	ENSPREG00000007828	LSM14B	85	39.442	Poecilia_reticulata
ENSIPUG00000014946	lsm14b	95	53.695	ENSPPYG00000011194	LSM14B	90	49.604	Pongo_abelii
ENSIPUG00000014946	lsm14b	87	62.291	ENSPCOG00000013625	LSM14B	90	62.040	Propithecus_coquereli
ENSIPUG00000014946	lsm14b	67	44.330	ENSPVAG00000017918	LSM14B	88	43.793	Pteropus_vampyrus
ENSIPUG00000014946	lsm14b	95	80.670	ENSPNAG00000012777	lsm14b	100	79.639	Pygocentrus_nattereri
ENSIPUG00000014946	lsm14b	95	54.545	ENSRNOG00000054557	Lsm14b	91	54.337	Rattus_norvegicus
ENSIPUG00000014946	lsm14b	77	58.228	ENSRBIG00000033461	LSM14B	88	57.878	Rhinopithecus_bieti
ENSIPUG00000014946	lsm14b	78	59.317	ENSRROG00000042949	LSM14B	81	58.991	Rhinopithecus_roxellana
ENSIPUG00000014946	lsm14b	77	58.544	ENSSBOG00000032820	LSM14B	89	58.199	Saimiri_boliviensis_boliviensis
ENSIPUG00000014946	lsm14b	77	59.119	ENSSHAG00000015528	LSM14B	87	58.360	Sarcophilus_harrisii
ENSIPUG00000014946	lsm14b	86	69.122	ENSSFOG00015004627	lsm14b	91	69.972	Scleropages_formosus
ENSIPUG00000014946	lsm14b	86	59.834	ENSSMAG00000012725	lsm14b	91	59.557	Scophthalmus_maximus
ENSIPUG00000014946	lsm14b	91	55.906	ENSSMAG00000000135	LSM14B	91	53.352	Scophthalmus_maximus
ENSIPUG00000014946	lsm14b	85	62.254	ENSSDUG00000020977	lsm14b	91	61.560	Seriola_dumerili
ENSIPUG00000014946	lsm14b	87	57.851	ENSSDUG00000022770	LSM14B	91	57.382	Seriola_dumerili
ENSIPUG00000014946	lsm14b	58	47.471	ENSSLDG00000011354	-	88	45.703	Seriola_lalandi_dorsalis
ENSIPUG00000014946	lsm14b	50	48.293	ENSSARG00000007749	-	97	48.293	Sorex_araneus
ENSIPUG00000014946	lsm14b	95	56.381	ENSSPUG00000014360	LSM14B	93	61.905	Sphenodon_punctatus
ENSIPUG00000014946	lsm14b	94	63.351	ENSSPAG00000020915	lsm14b	100	56.812	Stegastes_partitus
ENSIPUG00000014946	lsm14b	63	43.333	ENSSPAG00000018854	-	86	40.486	Stegastes_partitus
ENSIPUG00000014946	lsm14b	87	59.504	ENSSSCG00000026052	LSM14B	78	58.808	Sus_scrofa
ENSIPUG00000014946	lsm14b	77	58.589	ENSTGUG00000007884	LSM14B	89	59.306	Taeniopygia_guttata
ENSIPUG00000014946	lsm14b	94	55.990	ENSTRUG00000011354	lsm14b	90	54.622	Takifugu_rubripes
ENSIPUG00000014946	lsm14b	87	55.041	ENSTRUG00000001529	LSM14B	91	54.444	Takifugu_rubripes
ENSIPUG00000014946	lsm14b	86	57.851	ENSTNIG00000002445	lsm14b	90	57.382	Tetraodon_nigroviridis
ENSIPUG00000014946	lsm14b	77	94.872	ENSTTRG00000011043	LSM14B	90	38.298	Tursiops_truncatus
ENSIPUG00000014946	lsm14b	93	50.119	ENSUAMG00000025298	LSM14B	89	54.783	Ursus_americanus
ENSIPUG00000014946	lsm14b	93	50.119	ENSUMAG00000000480	LSM14B	89	54.783	Ursus_maritimus
ENSIPUG00000014946	lsm14b	77	58.491	ENSVVUG00000015920	LSM14B	88	58.147	Vulpes_vulpes
ENSIPUG00000014946	lsm14b	81	61.383	ENSXETG00000001997	lsm14b	100	61.383	Xenopus_tropicalis
ENSIPUG00000014946	lsm14b	85	56.410	ENSXMAG00000010013	lsm14b	90	54.444	Xiphophorus_maculatus