EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000014977 (Gene tree)
Gene ID: 108259473
Gene Symbol: gpatch1
Alias: im:7135982|wu:fc11h11|wu:fj99h08
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 11558 bases
Position: chr27:2118294-2129851
Accession: 108259473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000022106	DUF1604	PF07713.13	5.3e-37	1	1
ENSIPUP00000022106	G-patch	PF01585.23	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000023058	-	4743	XM_017458989	ENSIPUP00000022106	966 (aa)	XP_017314478	A0A2D0Q851

Gene Model

Click here to download ENSIPUG00000014977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000014977's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000014977	gpatch1	90	53.160	ENSG00000076650	GPATCH1	81	69.231	Homo_sapiens
ENSIPUG00000014977	gpatch1	90	52.841	ENSAMEG00000015575	GPATCH1	93	51.656	Ailuropoda_melanoleuca
ENSIPUG00000014977	gpatch1	81	79.891	ENSAOCG00000006668	gpatch1	99	56.408	Amphiprion_ocellaris
ENSIPUG00000014977	gpatch1	81	62.817	ENSAPEG00000000026	gpatch1	99	57.375	Amphiprion_percula
ENSIPUG00000014977	gpatch1	90	56.326	ENSATEG00000014494	gpatch1	94	59.275	Anabas_testudineus
ENSIPUG00000014977	gpatch1	91	50.768	ENSAPLG00000007584	GPATCH1	99	50.655	Anas_platyrhynchos
ENSIPUG00000014977	gpatch1	90	52.429	ENSANAG00000027002	GPATCH1	93	50.818	Aotus_nancymaae
ENSIPUG00000014977	gpatch1	81	63.014	ENSACLG00000024740	gpatch1	79	63.387	Astatotilapia_calliptera
ENSIPUG00000014977	gpatch1	92	71.183	ENSAMXG00000020177	gpatch1	99	71.444	Astyanax_mexicanus
ENSIPUG00000014977	gpatch1	90	52.828	ENSBTAG00000000721	GPATCH1	93	51.630	Bos_taurus
ENSIPUG00000014977	gpatch1	90	52.542	ENSCJAG00000000684	GPATCH1	93	50.818	Callithrix_jacchus
ENSIPUG00000014977	gpatch1	90	52.733	ENSCAFG00000007457	GPATCH1	78	52.141	Canis_familiaris
ENSIPUG00000014977	gpatch1	90	52.733	ENSCAFG00020019731	GPATCH1	93	52.141	Canis_lupus_dingo
ENSIPUG00000014977	gpatch1	90	53.425	ENSCHIG00000019626	GPATCH1	94	52.056	Capra_hircus
ENSIPUG00000014977	gpatch1	87	49.767	ENSCAPG00000008827	GPATCH1	81	52.549	Cavia_aperea
ENSIPUG00000014977	gpatch1	81	53.485	ENSCPOG00000024477	GPATCH1	92	50.493	Cavia_porcellus
ENSIPUG00000014977	gpatch1	90	51.923	ENSCCAG00000024676	GPATCH1	93	50.272	Cebus_capucinus
ENSIPUG00000014977	gpatch1	90	52.941	ENSCATG00000043637	GPATCH1	81	70.192	Cercocebus_atys
ENSIPUG00000014977	gpatch1	90	50.969	ENSCLAG00000003395	-	94	50.000	Chinchilla_lanigera
ENSIPUG00000014977	gpatch1	90	51.697	ENSCSAG00000004743	GPATCH1	93	49.672	Chlorocebus_sabaeus
ENSIPUG00000014977	gpatch1	77	65.741	ENSCHOG00000012865	GPATCH1	83	65.741	Choloepus_hoffmanni
ENSIPUG00000014977	gpatch1	78	55.078	ENSCPBG00000000666	GPATCH1	92	54.522	Chrysemys_picta_bellii
ENSIPUG00000014977	gpatch1	67	36.538	ENSCING00000012518	-	74	36.484	Ciona_intestinalis
ENSIPUG00000014977	gpatch1	78	54.545	ENSCANG00000012540	GPATCH1	92	50.102	Colobus_angolensis_palliatus
ENSIPUG00000014977	gpatch1	78	54.954	ENSCGRG00001016736	Gpatch1	93	51.822	Cricetulus_griseus_chok1gshd
ENSIPUG00000014977	gpatch1	93	42.134	ENSCGRG00000005069	Gpatch1	77	46.124	Cricetulus_griseus_crigri
ENSIPUG00000014977	gpatch1	80	56.957	ENSCSEG00000019456	-	84	76.147	Cynoglossus_semilaevis
ENSIPUG00000014977	gpatch1	91	64.906	ENSDARG00000033418	gpatch1	100	62.588	Danio_rerio
ENSIPUG00000014977	gpatch1	89	52.452	ENSDNOG00000005291	GPATCH1	96	51.265	Dasypus_novemcinctus
ENSIPUG00000014977	gpatch1	89	50.803	ENSDORG00000012546	Gpatch1	96	49.612	Dipodomys_ordii
ENSIPUG00000014977	gpatch1	90	50.284	ENSETEG00000003626	GPATCH1	72	57.018	Echinops_telfairi
ENSIPUG00000014977	gpatch1	95	37.033	ENSEBUG00000011286	gpatch1	73	42.076	Eptatretus_burgeri
ENSIPUG00000014977	gpatch1	90	52.608	ENSEASG00005021162	GPATCH1	96	50.710	Equus_asinus_asinus
ENSIPUG00000014977	gpatch1	90	53.295	ENSECAG00000022743	GPATCH1	90	52.093	Equus_caballus
ENSIPUG00000014977	gpatch1	66	55.051	ENSEEUG00000012925	GPATCH1	66	55.051	Erinaceus_europaeus
ENSIPUG00000014977	gpatch1	100	57.385	ENSELUG00000018195	gpatch1	99	59.215	Esox_lucius
ENSIPUG00000014977	gpatch1	90	51.708	ENSFCAG00000014917	GPATCH1	93	50.552	Felis_catus
ENSIPUG00000014977	gpatch1	92	51.354	ENSFALG00000007821	GPATCH1	94	52.151	Ficedula_albicollis
ENSIPUG00000014977	gpatch1	87	52.471	ENSFDAG00000003871	GPATCH1	93	51.587	Fukomys_damarensis
ENSIPUG00000014977	gpatch1	75	60.739	ENSGMOG00000003830	gpatch1	88	60.739	Gadus_morhua
ENSIPUG00000014977	gpatch1	93	50.753	ENSGALG00000004839	GPATCH1	97	51.068	Gallus_gallus
ENSIPUG00000014977	gpatch1	91	56.841	ENSGACG00000017544	gpatch1	97	55.905	Gasterosteus_aculeatus
ENSIPUG00000014977	gpatch1	90	52.349	ENSGAGG00000010067	GPATCH1	99	50.853	Gopherus_agassizii
ENSIPUG00000014977	gpatch1	87	52.503	ENSGGOG00000010862	GPATCH1	93	50.617	Gorilla_gorilla
ENSIPUG00000014977	gpatch1	90	59.272	ENSHBUG00000023462	gpatch1	94	60.043	Haplochromis_burtoni
ENSIPUG00000014977	gpatch1	90	51.195	ENSHGLG00000009334	GPATCH1	93	50.055	Heterocephalus_glaber_female
ENSIPUG00000014977	gpatch1	90	51.081	ENSHGLG00100018074	GPATCH1	93	49.945	Heterocephalus_glaber_male
ENSIPUG00000014977	gpatch1	90	50.907	ENSSTOG00000003720	GPATCH1	93	50.773	Ictidomys_tridecemlineatus
ENSIPUG00000014977	gpatch1	90	52.686	ENSJJAG00000023765	Gpatch1	93	51.987	Jaculus_jaculus
ENSIPUG00000014977	gpatch1	99	55.131	ENSKMAG00000017950	gpatch1	94	57.097	Kryptolebias_marmoratus
ENSIPUG00000014977	gpatch1	92	56.944	ENSLBEG00000026527	gpatch1	92	58.157	Labrus_bergylta
ENSIPUG00000014977	gpatch1	87	55.426	ENSLACG00000008130	GPATCH1	93	54.860	Latimeria_chalumnae
ENSIPUG00000014977	gpatch1	99	57.157	ENSLOCG00000001800	gpatch1	99	55.521	Lepisosteus_oculatus
ENSIPUG00000014977	gpatch1	90	52.027	ENSLAFG00000013589	GPATCH1	93	51.574	Loxodonta_africana
ENSIPUG00000014977	gpatch1	90	52.828	ENSMFAG00000034418	GPATCH1	81	70.192	Macaca_fascicularis
ENSIPUG00000014977	gpatch1	90	52.828	ENSMMUG00000011790	GPATCH1	81	69.231	Macaca_mulatta
ENSIPUG00000014977	gpatch1	90	52.828	ENSMNEG00000045084	GPATCH1	81	68.269	Macaca_nemestrina
ENSIPUG00000014977	gpatch1	90	45.136	ENSMLEG00000043840	GPATCH1	92	43.996	Mandrillus_leucophaeus
ENSIPUG00000014977	gpatch1	81	63.014	ENSMZEG00005001926	gpatch1	80	63.387	Maylandia_zebra
ENSIPUG00000014977	gpatch1	90	50.781	ENSMGAG00000005775	GPATCH1	92	50.870	Meleagris_gallopavo
ENSIPUG00000014977	gpatch1	90	47.941	ENSMICG00000004829	GPATCH1	96	47.420	Microcebus_murinus
ENSIPUG00000014977	gpatch1	90	51.798	ENSMOCG00000000174	Gpatch1	94	52.350	Microtus_ochrogaster
ENSIPUG00000014977	gpatch1	83	58.243	ENSMMOG00000002140	gpatch1	97	55.663	Mola_mola
ENSIPUG00000014977	gpatch1	90	51.525	ENSMODG00000012226	GPATCH1	94	49.732	Monodelphis_domestica
ENSIPUG00000014977	gpatch1	99	54.491	ENSMALG00000014386	gpatch1	94	58.199	Monopterus_albus
ENSIPUG00000014977	gpatch1	93	50.927	ENSMUSG00000063808	Gpatch1	98	72.917	Mus_musculus
ENSIPUG00000014977	gpatch1	93	50.598	MGP_PahariEiJ_G0012816	Gpatch1	98	73.958	Mus_pahari
ENSIPUG00000014977	gpatch1	93	50.709	MGP_SPRETEiJ_G0030681	Gpatch1	98	73.958	Mus_spretus
ENSIPUG00000014977	gpatch1	90	52.343	ENSMPUG00000007658	GPATCH1	93	51.268	Mustela_putorius_furo
ENSIPUG00000014977	gpatch1	90	51.995	ENSMLUG00000012161	GPATCH1	93	50.825	Myotis_lucifugus
ENSIPUG00000014977	gpatch1	90	52.365	ENSNGAG00000012455	Gpatch1	93	51.965	Nannospalax_galili
ENSIPUG00000014977	gpatch1	90	53.027	ENSNLEG00000007659	GPATCH1	81	69.231	Nomascus_leucogenys
ENSIPUG00000014977	gpatch1	73	48.592	ENSMEUG00000015174	GPATCH1	73	49.294	Notamacropus_eugenii
ENSIPUG00000014977	gpatch1	89	51.139	ENSODEG00000007103	GPATCH1	93	49.945	Octodon_degus
ENSIPUG00000014977	gpatch1	90	59.091	ENSONIG00000003302	gpatch1	95	59.549	Oreochromis_niloticus
ENSIPUG00000014977	gpatch1	90	51.109	ENSOANG00000012732	GPATCH1	94	51.053	Ornithorhynchus_anatinus
ENSIPUG00000014977	gpatch1	89	53.356	ENSOCUG00000015905	GPATCH1	92	52.695	Oryctolagus_cuniculus
ENSIPUG00000014977	gpatch1	90	58.050	ENSORLG00000018706	gpatch1	93	56.583	Oryzias_latipes
ENSIPUG00000014977	gpatch1	90	56.370	ENSOMEG00000022688	gpatch1	94	56.311	Oryzias_melastigma
ENSIPUG00000014977	gpatch1	81	55.019	ENSOGAG00000004016	GPATCH1	96	55.273	Otolemur_garnettii
ENSIPUG00000014977	gpatch1	89	52.901	ENSOARG00000004365	GPATCH1	93	52.131	Ovis_aries
ENSIPUG00000014977	gpatch1	90	53.054	ENSPPAG00000020990	GPATCH1	81	68.571	Pan_paniscus
ENSIPUG00000014977	gpatch1	90	52.050	ENSPPRG00000017245	GPATCH1	93	50.773	Panthera_pardus
ENSIPUG00000014977	gpatch1	90	52.847	ENSPTIG00000019649	GPATCH1	93	51.545	Panthera_tigris_altaica
ENSIPUG00000014977	gpatch1	90	52.941	ENSPTRG00000010803	GPATCH1	81	69.231	Pan_troglodytes
ENSIPUG00000014977	gpatch1	90	52.854	ENSPANG00000012374	GPATCH1	81	70.192	Papio_anubis
ENSIPUG00000014977	gpatch1	80	62.356	ENSPKIG00000020745	gpatch1	99	56.845	Paramormyrops_kingsleyae
ENSIPUG00000014977	gpatch1	90	52.548	ENSPSIG00000013433	GPATCH1	99	51.165	Pelodiscus_sinensis
ENSIPUG00000014977	gpatch1	90	52.311	ENSPEMG00000000636	Gpatch1	93	51.991	Peromyscus_maniculatus_bairdii
ENSIPUG00000014977	gpatch1	90	52.397	ENSPCIG00000021003	GPATCH1	98	50.709	Phascolarctos_cinereus
ENSIPUG00000014977	gpatch1	69	54.853	ENSPREG00000008264	gpatch1	79	55.294	Poecilia_reticulata
ENSIPUG00000014977	gpatch1	99	48.984	ENSPPYG00000009824	GPATCH1	99	48.272	Pongo_abelii
ENSIPUG00000014977	gpatch1	81	51.143	ENSPCAG00000005931	GPATCH1	85	51.111	Procavia_capensis
ENSIPUG00000014977	gpatch1	92	50.388	ENSPCOG00000009674	GPATCH1	75	59.660	Propithecus_coquereli
ENSIPUG00000014977	gpatch1	73	54.494	ENSPVAG00000017767	GPATCH1	70	56.522	Pteropus_vampyrus
ENSIPUG00000014977	gpatch1	81	63.534	ENSPNYG00000018189	gpatch1	89	63.910	Pundamilia_nyererei
ENSIPUG00000014977	gpatch1	100	71.058	ENSPNAG00000013187	gpatch1	100	70.688	Pygocentrus_nattereri
ENSIPUG00000014977	gpatch1	93	51.638	ENSRNOG00000011584	Gpatch1	93	52.649	Rattus_norvegicus
ENSIPUG00000014977	gpatch1	90	48.303	ENSRBIG00000034723	GPATCH1	94	46.565	Rhinopithecus_bieti
ENSIPUG00000014977	gpatch1	90	53.167	ENSRROG00000024428	GPATCH1	81	69.231	Rhinopithecus_roxellana
ENSIPUG00000014977	gpatch1	90	52.316	ENSSBOG00000034650	GPATCH1	93	50.709	Saimiri_boliviensis_boliviensis
ENSIPUG00000014977	gpatch1	90	52.794	ENSSHAG00000016016	GPATCH1	93	51.522	Sarcophilus_harrisii
ENSIPUG00000014977	gpatch1	91	60.698	ENSSFOG00015011535	gpatch1	99	58.316	Scleropages_formosus
ENSIPUG00000014977	gpatch1	90	66.304	ENSSMAG00000002883	gpatch1	99	52.885	Scophthalmus_maximus
ENSIPUG00000014977	gpatch1	81	59.337	ENSSDUG00000007444	gpatch1	94	56.794	Seriola_dumerili
ENSIPUG00000014977	gpatch1	81	59.497	ENSSLDG00000002856	gpatch1	89	59.976	Seriola_lalandi_dorsalis
ENSIPUG00000014977	gpatch1	69	59.581	ENSSARG00000004108	GPATCH1	70	59.581	Sorex_araneus
ENSIPUG00000014977	gpatch1	90	52.740	ENSSSCG00000002865	GPATCH1	96	52.533	Sus_scrofa
ENSIPUG00000014977	gpatch1	92	50.823	ENSTGUG00000009401	GPATCH1	94	51.138	Taeniopygia_guttata
ENSIPUG00000014977	gpatch1	81	57.795	ENSTRUG00000025081	gpatch1	94	54.063	Takifugu_rubripes
ENSIPUG00000014977	gpatch1	81	57.921	ENSTRUG00000005785	-	94	54.280	Takifugu_rubripes
ENSIPUG00000014977	gpatch1	81	58.942	ENSTNIG00000002554	gpatch1	97	58.846	Tetraodon_nigroviridis
ENSIPUG00000014977	gpatch1	59	52.841	ENSTBEG00000007750	-	78	52.841	Tupaia_belangeri
ENSIPUG00000014977	gpatch1	84	66.308	ENSTTRG00000012221	GPATCH1	87	66.308	Tursiops_truncatus
ENSIPUG00000014977	gpatch1	90	52.273	ENSUMAG00000014645	GPATCH1	85	69.524	Ursus_maritimus
ENSIPUG00000014977	gpatch1	81	68.208	ENSVPAG00000010313	GPATCH1	87	67.778	Vicugna_pacos
ENSIPUG00000014977	gpatch1	90	52.392	ENSVVUG00000016572	GPATCH1	93	51.652	Vulpes_vulpes
ENSIPUG00000014977	gpatch1	99	44.852	ENSXETG00000018276	gpatch1	99	48.485	Xenopus_tropicalis