EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000015102 (Gene tree)
Gene ID: -
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 20670 bases
Position: chr26:9525322-9545991
Accession: ZDB-GENE-030131-4076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000022284	S1	PF00575.23	1.2e-55	1	4
ENSIPUP00000022284	S1	PF00575.23	1.2e-55	2	4
ENSIPUP00000022284	S1	PF00575.23	1.2e-55	3	4
ENSIPUP00000022284	S1	PF00575.23	1.2e-55	4	4
ENSIPUP00000022323	S1	PF00575.23	1.1e-52	1	4
ENSIPUP00000022323	S1	PF00575.23	1.1e-52	2	4
ENSIPUP00000022323	S1	PF00575.23	1.1e-52	3	4
ENSIPUP00000022323	S1	PF00575.23	1.1e-52	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000023237	-	3561	-	ENSIPUP00000022284	1142 (aa)	-	-
ENSIPUT00000023277	-	3748	-	ENSIPUP00000022323	918 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000015102's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015102's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015102	pdcd11	99	41.558	ENSG00000148843	PDCD11	62	40.258	Homo_sapiens
ENSIPUG00000015102	pdcd11	99	54.682	ENSAPOG00000015629	pdcd11	63	52.622	Acanthochromis_polyacanthus
ENSIPUG00000015102	pdcd11	98	41.974	ENSAMEG00000017935	PDCD11	62	40.929	Ailuropoda_melanoleuca
ENSIPUG00000015102	pdcd11	99	50.591	ENSACIG00000006458	-	99	50.053	Amphilophus_citrinellus
ENSIPUG00000015102	pdcd11	99	53.987	ENSAOCG00000015287	pdcd11	63	52.231	Amphiprion_ocellaris
ENSIPUG00000015102	pdcd11	99	54.203	ENSAPEG00000020240	pdcd11	97	53.931	Amphiprion_percula
ENSIPUG00000015102	pdcd11	99	55.556	ENSATEG00000021043	pdcd11	63	53.940	Anabas_testudineus
ENSIPUG00000015102	pdcd11	98	43.648	ENSAPLG00000010301	PDCD11	62	42.119	Anas_platyrhynchos
ENSIPUG00000015102	pdcd11	99	43.042	ENSACAG00000004796	PDCD11	64	42.278	Anolis_carolinensis
ENSIPUG00000015102	pdcd11	99	41.775	ENSANAG00000034576	PDCD11	62	40.464	Aotus_nancymaae
ENSIPUG00000015102	pdcd11	99	52.061	ENSACLG00000018236	pdcd11	66	51.013	Astatotilapia_calliptera
ENSIPUG00000015102	pdcd11	99	59.544	ENSAMXG00000005458	pdcd11	98	61.866	Astyanax_mexicanus
ENSIPUG00000015102	pdcd11	99	42.579	ENSBTAG00000009715	PDCD11	62	41.237	Bos_taurus
ENSIPUG00000015102	pdcd11	99	41.558	ENSCJAG00000018257	PDCD11	62	40.531	Callithrix_jacchus
ENSIPUG00000015102	pdcd11	98	42.391	ENSCAFG00000010411	PDCD11	62	41.258	Canis_familiaris
ENSIPUG00000015102	pdcd11	99	42.254	ENSCAFG00020010369	PDCD11	63	41.258	Canis_lupus_dingo
ENSIPUG00000015102	pdcd11	99	42.077	ENSCHIG00000025218	PDCD11	62	40.851	Capra_hircus
ENSIPUG00000015102	pdcd11	93	40.522	ENSTSYG00000033423	PDCD11	61	39.305	Carlito_syrichta
ENSIPUG00000015102	pdcd11	82	37.143	ENSCAPG00000005386	PDCD11	56	37.143	Cavia_aperea
ENSIPUG00000015102	pdcd11	99	40.476	ENSCPOG00000010957	PDCD11	62	39.280	Cavia_porcellus
ENSIPUG00000015102	pdcd11	99	41.883	ENSCCAG00000018950	PDCD11	62	40.858	Cebus_capucinus
ENSIPUG00000015102	pdcd11	99	41.450	ENSCATG00000044331	PDCD11	62	40.274	Cercocebus_atys
ENSIPUG00000015102	pdcd11	99	41.272	ENSCLAG00000001029	PDCD11	62	40.188	Chinchilla_lanigera
ENSIPUG00000015102	pdcd11	99	41.558	ENSCSAG00000005346	PDCD11	62	40.343	Chlorocebus_sabaeus
ENSIPUG00000015102	pdcd11	76	50.000	ENSCHOG00000004796	PDCD11	50	40.511	Choloepus_hoffmanni
ENSIPUG00000015102	pdcd11	99	41.226	ENSCPBG00000024487	PDCD11	68	41.096	Chrysemys_picta_bellii
ENSIPUG00000015102	pdcd11	88	35.751	ENSCING00000002715	-	55	32.567	Ciona_intestinalis
ENSIPUG00000015102	pdcd11	99	41.558	ENSCANG00000043300	PDCD11	62	40.343	Colobus_angolensis_palliatus
ENSIPUG00000015102	pdcd11	99	41.843	ENSCGRG00001006458	Pdcd11	62	40.446	Cricetulus_griseus_chok1gshd
ENSIPUG00000015102	pdcd11	99	41.737	ENSCGRG00000003583	Pdcd11	62	40.360	Cricetulus_griseus_crigri
ENSIPUG00000015102	pdcd11	99	54.808	ENSCSEG00000010739	pdcd11	64	52.654	Cynoglossus_semilaevis
ENSIPUG00000015102	pdcd11	99	45.553	ENSCVAG00000018903	pdcd11	63	45.635	Cyprinodon_variegatus
ENSIPUG00000015102	pdcd11	99	55.688	ENSDARG00000052480	pdcd11	61	54.016	Danio_rerio
ENSIPUG00000015102	pdcd11	99	42.060	ENSDNOG00000013838	PDCD11	62	40.515	Dasypus_novemcinctus
ENSIPUG00000015102	pdcd11	99	41.542	ENSDORG00000010420	Pdcd11	62	40.390	Dipodomys_ordii
ENSIPUG00000015102	pdcd11	94	35.231	ENSETEG00000000813	PDCD11	63	35.236	Echinops_telfairi
ENSIPUG00000015102	pdcd11	91	41.729	ENSEASG00005015159	PDCD11	60	41.752	Equus_asinus_asinus
ENSIPUG00000015102	pdcd11	99	42.703	ENSECAG00000020507	PDCD11	62	41.166	Equus_caballus
ENSIPUG00000015102	pdcd11	81	40.276	ENSEEUG00000009245	PDCD11	52	40.416	Erinaceus_europaeus
ENSIPUG00000015102	pdcd11	99	54.292	ENSELUG00000004211	pdcd11	62	53.584	Esox_lucius
ENSIPUG00000015102	pdcd11	98	42.191	ENSFCAG00000002384	PDCD11	62	41.015	Felis_catus
ENSIPUG00000015102	pdcd11	99	41.424	ENSFALG00000008775	PDCD11	63	41.788	Ficedula_albicollis
ENSIPUG00000015102	pdcd11	99	40.215	ENSFDAG00000009532	PDCD11	62	39.026	Fukomys_damarensis
ENSIPUG00000015102	pdcd11	97	45.524	ENSFHEG00000022997	pdcd11	63	45.662	Fundulus_heteroclitus
ENSIPUG00000015102	pdcd11	98	50.662	ENSGMOG00000004186	pdcd11	56	50.655	Gadus_morhua
ENSIPUG00000015102	pdcd11	99	43.203	ENSGALG00000008265	PDCD11	79	42.137	Gallus_gallus
ENSIPUG00000015102	pdcd11	99	51.884	ENSGAFG00000012806	pdcd11	61	50.438	Gambusia_affinis
ENSIPUG00000015102	pdcd11	99	53.929	ENSGACG00000018233	pdcd11	62	51.923	Gasterosteus_aculeatus
ENSIPUG00000015102	pdcd11	90	46.336	ENSGAGG00000024314	PDCD11	61	44.465	Gopherus_agassizii
ENSIPUG00000015102	pdcd11	99	41.558	ENSGGOG00000011621	PDCD11	62	40.172	Gorilla_gorilla
ENSIPUG00000015102	pdcd11	99	55.411	ENSHBUG00000020226	pdcd11	63	53.503	Haplochromis_burtoni
ENSIPUG00000015102	pdcd11	99	42.270	ENSHGLG00000001462	PDCD11	62	40.738	Heterocephalus_glaber_female
ENSIPUG00000015102	pdcd11	99	42.270	ENSHGLG00100018779	PDCD11	63	40.738	Heterocephalus_glaber_male
ENSIPUG00000015102	pdcd11	99	52.376	ENSHCOG00000016006	pdcd11	62	50.521	Hippocampus_comes
ENSIPUG00000015102	pdcd11	99	40.508	ENSSTOG00000014553	PDCD11	63	40.893	Ictidomys_tridecemlineatus
ENSIPUG00000015102	pdcd11	99	42.457	ENSJJAG00000015523	Pdcd11	63	40.905	Jaculus_jaculus
ENSIPUG00000015102	pdcd11	99	51.676	ENSKMAG00000021182	pdcd11	99	51.676	Kryptolebias_marmoratus
ENSIPUG00000015102	pdcd11	94	53.515	ENSLBEG00000009990	-	99	53.794	Labrus_bergylta
ENSIPUG00000015102	pdcd11	99	52.820	ENSLOCG00000011818	pdcd11	63	52.010	Lepisosteus_oculatus
ENSIPUG00000015102	pdcd11	99	42.208	ENSLAFG00000008398	PDCD11	63	40.773	Loxodonta_africana
ENSIPUG00000015102	pdcd11	99	41.558	ENSMFAG00000044058	PDCD11	62	40.429	Macaca_fascicularis
ENSIPUG00000015102	pdcd11	99	41.558	ENSMMUG00000007058	PDCD11	62	40.429	Macaca_mulatta
ENSIPUG00000015102	pdcd11	99	41.775	ENSMNEG00000040726	PDCD11	62	40.601	Macaca_nemestrina
ENSIPUG00000015102	pdcd11	99	41.667	ENSMLEG00000040978	PDCD11	63	40.515	Mandrillus_leucophaeus
ENSIPUG00000015102	pdcd11	99	54.898	ENSMAMG00000009572	pdcd11	63	53.147	Mastacembelus_armatus
ENSIPUG00000015102	pdcd11	99	55.303	ENSMZEG00005008949	pdcd11	63	53.415	Maylandia_zebra
ENSIPUG00000015102	pdcd11	99	43.189	ENSMGAG00000010482	PDCD11	62	42.295	Meleagris_gallopavo
ENSIPUG00000015102	pdcd11	99	41.711	ENSMAUG00000014924	Pdcd11	53	42.179	Mesocricetus_auratus
ENSIPUG00000015102	pdcd11	99	43.027	ENSMICG00000012421	PDCD11	62	41.509	Microcebus_murinus
ENSIPUG00000015102	pdcd11	99	41.139	ENSMOCG00000021792	Pdcd11	63	38.955	Microtus_ochrogaster
ENSIPUG00000015102	pdcd11	99	53.754	ENSMMOG00000007572	pdcd11	97	54.057	Mola_mola
ENSIPUG00000015102	pdcd11	99	42.362	ENSMODG00000011077	PDCD11	62	40.431	Monodelphis_domestica
ENSIPUG00000015102	pdcd11	99	53.548	ENSMALG00000003859	pdcd11	99	53.548	Monopterus_albus
ENSIPUG00000015102	pdcd11	99	41.801	MGP_CAROLIEiJ_G0023050	Pdcd11	63	39.812	Mus_caroli
ENSIPUG00000015102	pdcd11	99	41.756	ENSMUSG00000025047	Pdcd11	63	39.711	Mus_musculus
ENSIPUG00000015102	pdcd11	99	41.586	MGP_PahariEiJ_G0014540	Pdcd11	62	39.727	Mus_pahari
ENSIPUG00000015102	pdcd11	99	41.684	MGP_SPRETEiJ_G0023971	Pdcd11	63	39.728	Mus_spretus
ENSIPUG00000015102	pdcd11	98	41.957	ENSMPUG00000016829	PDCD11	62	40.913	Mustela_putorius_furo
ENSIPUG00000015102	pdcd11	99	42.254	ENSMLUG00000004997	PDCD11	62	40.636	Myotis_lucifugus
ENSIPUG00000015102	pdcd11	99	41.757	ENSNGAG00000018143	Pdcd11	62	40.120	Nannospalax_galili
ENSIPUG00000015102	pdcd11	94	48.216	ENSNBRG00000021596	pdcd11	98	52.207	Neolamprologus_brichardi
ENSIPUG00000015102	pdcd11	99	39.112	ENSNLEG00000026700	PDCD11	61	38.316	Nomascus_leucogenys
ENSIPUG00000015102	pdcd11	93	44.475	ENSOPRG00000010593	PDCD11	57	45.014	Ochotona_princeps
ENSIPUG00000015102	pdcd11	99	41.056	ENSODEG00000008079	PDCD11	62	40.017	Octodon_degus
ENSIPUG00000015102	pdcd11	99	55.844	ENSONIG00000018835	pdcd11	63	53.940	Oreochromis_niloticus
ENSIPUG00000015102	pdcd11	99	40.303	ENSOANG00000001636	-	63	38.140	Ornithorhynchus_anatinus
ENSIPUG00000015102	pdcd11	99	41.667	ENSOCUG00000006312	PDCD11	62	40.687	Oryctolagus_cuniculus
ENSIPUG00000015102	pdcd11	95	55.305	ENSORLG00000012995	pdcd11	96	55.418	Oryzias_latipes
ENSIPUG00000015102	pdcd11	99	56.399	ENSORLG00020003642	pdcd11	62	54.745	Oryzias_latipes_hni
ENSIPUG00000015102	pdcd11	99	56.941	ENSORLG00015001618	pdcd11	62	55.097	Oryzias_latipes_hsok
ENSIPUG00000015102	pdcd11	86	55.259	ENSOMEG00000010947	-	97	55.189	Oryzias_melastigma
ENSIPUG00000015102	pdcd11	98	42.671	ENSOGAG00000008683	PDCD11	62	41.595	Otolemur_garnettii
ENSIPUG00000015102	pdcd11	99	41.542	ENSOARG00000003719	PDCD11	62	40.426	Ovis_aries
ENSIPUG00000015102	pdcd11	99	40.043	ENSPPAG00000024593	PDCD11	61	39.056	Pan_paniscus
ENSIPUG00000015102	pdcd11	98	42.733	ENSPPRG00000015133	PDCD11	62	41.445	Panthera_pardus
ENSIPUG00000015102	pdcd11	98	42.625	ENSPTIG00000011433	PDCD11	62	41.359	Panthera_tigris_altaica
ENSIPUG00000015102	pdcd11	99	41.450	ENSPTRG00000002911	PDCD11	62	40.172	Pan_troglodytes
ENSIPUG00000015102	pdcd11	99	41.450	ENSPANG00000020959	PDCD11	62	40.343	Papio_anubis
ENSIPUG00000015102	pdcd11	99	50.543	ENSPKIG00000000973	pdcd11	63	49.694	Paramormyrops_kingsleyae
ENSIPUG00000015102	pdcd11	98	43.194	ENSPSIG00000005102	PDCD11	76	42.759	Pelodiscus_sinensis
ENSIPUG00000015102	pdcd11	94	48.268	ENSPMGG00000007289	pdcd11	70	48.268	Periophthalmus_magnuspinnatus
ENSIPUG00000015102	pdcd11	99	41.346	ENSPEMG00000010315	Pdcd11	62	40.034	Peromyscus_maniculatus_bairdii
ENSIPUG00000015102	pdcd11	98	38.470	ENSPMAG00000003098	pdcd11	62	37.702	Petromyzon_marinus
ENSIPUG00000015102	pdcd11	99	43.384	ENSPCIG00000001118	PDCD11	61	41.237	Phascolarctos_cinereus
ENSIPUG00000015102	pdcd11	99	54.069	ENSPFOG00000006012	pdcd11	62	51.832	Poecilia_formosa
ENSIPUG00000015102	pdcd11	99	53.672	ENSPLAG00000014494	pdcd11	98	53.672	Poecilia_latipinna
ENSIPUG00000015102	pdcd11	99	52.916	ENSPMEG00000018177	pdcd11	98	53.240	Poecilia_mexicana
ENSIPUG00000015102	pdcd11	99	54.624	ENSPREG00000000475	pdcd11	63	51.874	Poecilia_reticulata
ENSIPUG00000015102	pdcd11	99	41.781	ENSPPYG00000002621	PDCD11	60	39.617	Pongo_abelii
ENSIPUG00000015102	pdcd11	99	38.897	ENSPCOG00000023327	PDCD11	59	38.897	Propithecus_coquereli
ENSIPUG00000015102	pdcd11	99	43.229	ENSPVAG00000004176	PDCD11	59	42.029	Pteropus_vampyrus
ENSIPUG00000015102	pdcd11	99	55.195	ENSPNYG00000003979	pdcd11	63	53.327	Pundamilia_nyererei
ENSIPUG00000015102	pdcd11	90	66.547	ENSPNAG00000017225	pdcd11	60	65.143	Pygocentrus_nattereri
ENSIPUG00000015102	pdcd11	99	41.756	ENSRNOG00000020304	Pdcd11	62	40.085	Rattus_norvegicus
ENSIPUG00000015102	pdcd11	99	41.450	ENSRBIG00000011889	PDCD11	62	40.429	Rhinopithecus_bieti
ENSIPUG00000015102	pdcd11	99	41.342	ENSRROG00000030483	PDCD11	62	40.343	Rhinopithecus_roxellana
ENSIPUG00000015102	pdcd11	74	32.374	YMR229C	-	64	33.333	Saccharomyces_cerevisiae
ENSIPUG00000015102	pdcd11	99	41.923	ENSSBOG00000030308	PDCD11	60	41.923	Saimiri_boliviensis_boliviensis
ENSIPUG00000015102	pdcd11	99	42.382	ENSSHAG00000018258	PDCD11	62	40.550	Sarcophilus_harrisii
ENSIPUG00000015102	pdcd11	99	53.348	ENSSFOG00015003881	pdcd11	63	52.109	Scleropages_formosus
ENSIPUG00000015102	pdcd11	99	54.310	ENSSMAG00000006612	pdcd11	63	53.018	Scophthalmus_maximus
ENSIPUG00000015102	pdcd11	99	53.696	ENSSDUG00000021302	pdcd11	99	53.696	Seriola_dumerili
ENSIPUG00000015102	pdcd11	97	55.408	ENSSLDG00000010228	pdcd11	98	55.408	Seriola_lalandi_dorsalis
ENSIPUG00000015102	pdcd11	97	44.366	ENSSARG00000002540	PDCD11	56	40.232	Sorex_araneus
ENSIPUG00000015102	pdcd11	99	53.879	ENSSPAG00000017558	pdcd11	65	52.314	Stegastes_partitus
ENSIPUG00000015102	pdcd11	99	42.077	ENSSSCG00000010599	PDCD11	62	41.065	Sus_scrofa
ENSIPUG00000015102	pdcd11	99	52.581	ENSTRUG00000014291	pdcd11	89	51.177	Takifugu_rubripes
ENSIPUG00000015102	pdcd11	99	52.778	ENSTNIG00000012085	pdcd11	76	52.778	Tetraodon_nigroviridis
ENSIPUG00000015102	pdcd11	99	40.256	ENSTBEG00000001893	PDCD11	62	39.846	Tupaia_belangeri
ENSIPUG00000015102	pdcd11	87	41.319	ENSTTRG00000003356	PDCD11	62	38.660	Tursiops_truncatus
ENSIPUG00000015102	pdcd11	99	42.037	ENSUAMG00000018015	PDCD11	63	40.858	Ursus_americanus
ENSIPUG00000015102	pdcd11	99	41.387	ENSUMAG00000023567	PDCD11	63	40.550	Ursus_maritimus
ENSIPUG00000015102	pdcd11	84	50.562	ENSVPAG00000007405	PDCD11	54	50.562	Vicugna_pacos
ENSIPUG00000015102	pdcd11	98	42.283	ENSVVUG00000004457	PDCD11	63	41.258	Vulpes_vulpes
ENSIPUG00000015102	pdcd11	99	41.357	ENSXETG00000009482	pdcd11	62	41.445	Xenopus_tropicalis
ENSIPUG00000015102	pdcd11	99	51.123	ENSXCOG00000012420	pdcd11	64	49.866	Xiphophorus_couchianus
ENSIPUG00000015102	pdcd11	99	53.978	ENSXMAG00000004638	pdcd11	62	52.014	Xiphophorus_maculatus