EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000015121 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 3586 bases
Position: chr25:252520-256105
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000022312	zf-C2H2	PF00096.26	3.9e-61	1	10
ENSIPUP00000022312	zf-C2H2	PF00096.26	3.9e-61	2	10
ENSIPUP00000022312	zf-C2H2	PF00096.26	3.9e-61	3	10
ENSIPUP00000022312	zf-C2H2	PF00096.26	3.9e-61	4	10
ENSIPUP00000022312	zf-C2H2	PF00096.26	3.9e-61	5	10
ENSIPUP00000022312	zf-C2H2	PF00096.26	3.9e-61	6	10
ENSIPUP00000022312	zf-C2H2	PF00096.26	3.9e-61	7	10
ENSIPUP00000022312	zf-C2H2	PF00096.26	3.9e-61	8	10
ENSIPUP00000022312	zf-C2H2	PF00096.26	3.9e-61	9	10
ENSIPUP00000022312	zf-C2H2	PF00096.26	3.9e-61	10	10
ENSIPUP00000022312	zf-met	PF12874.7	3.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000023266	-	1649	-	ENSIPUP00000022312	517 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000015121's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015121's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000015121	-	67	37.383	ENSIPUG00000000131	snai2	60	37.037
ENSIPUG00000015121	-	60	62.385	ENSIPUG00000011073	-	98	60.987
ENSIPUG00000015121	-	72	40.075	ENSIPUG00000012109	ZN12	59	40.075
ENSIPUG00000015121	-	58	41.791	ENSIPUG00000012830	-	82	53.191
ENSIPUG00000015121	-	60	44.211	ENSIPUG00000007076	-	89	39.535
ENSIPUG00000015121	-	91	60.842	ENSIPUG00000015177	-	98	60.842
ENSIPUG00000015121	-	72	61.340	ENSIPUG00000007934	-	96	61.340
ENSIPUG00000015121	-	58	63.522	ENSIPUG00000021484	-	97	63.522
ENSIPUG00000015121	-	56	62.573	ENSIPUG00000013065	-	94	59.043
ENSIPUG00000015121	-	87	61.261	ENSIPUG00000023513	-	66	60.938
ENSIPUG00000015121	-	56	40.278	ENSIPUG00000011399	zbtb47b	81	39.130
ENSIPUG00000015121	-	73	56.597	ENSIPUG00000006916	-	87	56.597
ENSIPUG00000015121	-	64	60.000	ENSIPUG00000004428	-	89	60.000
ENSIPUG00000015121	-	99	60.811	ENSIPUG00000015468	-	95	62.887
ENSIPUG00000015121	-	59	50.575	ENSIPUG00000013315	-	94	50.575
ENSIPUG00000015121	-	70	65.829	ENSIPUG00000021556	-	99	62.814
ENSIPUG00000015121	-	73	53.247	ENSIPUG00000017575	-	61	53.766
ENSIPUG00000015121	-	70	43.956	ENSIPUG00000019205	-	84	43.956
ENSIPUG00000015121	-	58	39.103	ENSIPUG00000011258	-	90	39.103
ENSIPUG00000015121	-	97	55.248	ENSIPUG00000015233	-	98	54.941
ENSIPUG00000015121	-	70	58.750	ENSIPUG00000001941	-	97	58.750
ENSIPUG00000015121	-	67	33.117	ENSIPUG00000015844	snai1b	57	33.117
ENSIPUG00000015121	-	74	60.377	ENSIPUG00000016075	-	99	60.377
ENSIPUG00000015121	-	69	59.091	ENSIPUG00000003011	-	56	59.091
ENSIPUG00000015121	-	71	61.811	ENSIPUG00000009750	-	94	55.586
ENSIPUG00000015121	-	72	59.398	ENSIPUG00000012960	-	96	55.000
ENSIPUG00000015121	-	89	64.286	ENSIPUG00000015601	-	95	64.286
ENSIPUG00000015121	-	56	40.909	ENSIPUG00000021407	-	57	40.909
ENSIPUG00000015121	-	91	54.317	ENSIPUG00000021434	-	94	54.317
ENSIPUG00000015121	-	78	52.542	ENSIPUG00000023761	-	90	52.542
ENSIPUG00000015121	-	70	64.706	ENSIPUG00000005339	-	100	64.706
ENSIPUG00000015121	-	54	43.976	ENSIPUG00000012769	gfi1b	64	43.976
ENSIPUG00000015121	-	70	59.346	ENSIPUG00000003960	-	84	59.346
ENSIPUG00000015121	-	59	58.768	ENSIPUG00000021518	-	88	58.768
ENSIPUG00000015121	-	65	61.806	ENSIPUG00000021515	-	92	61.806
ENSIPUG00000015121	-	57	46.097	ENSIPUG00000022266	ZNF135	61	46.097
ENSIPUG00000015121	-	67	38.782	ENSIPUG00000008581	znf319b	88	38.333
ENSIPUG00000015121	-	59	56.655	ENSIPUG00000021441	-	94	56.655
ENSIPUG00000015121	-	72	68.599	ENSIPUG00000015400	-	96	68.599
ENSIPUG00000015121	-	60	56.731	ENSIPUG00000002655	-	98	57.865
ENSIPUG00000015121	-	74	60.366	ENSIPUG00000021527	-	96	60.166
ENSIPUG00000015121	-	99	56.818	ENSIPUG00000015203	-	97	54.607
ENSIPUG00000015121	-	71	62.632	ENSIPUG00000006936	-	96	62.632
ENSIPUG00000015121	-	70	58.755	ENSIPUG00000005733	-	67	58.755
ENSIPUG00000015121	-	58	40.278	ENSIPUG00000003040	zbtb47a	79	40.000
ENSIPUG00000015121	-	72	59.633	ENSIPUG00000021472	-	95	57.563
ENSIPUG00000015121	-	56	45.789	ENSIPUG00000011652	znf648	74	45.789
ENSIPUG00000015121	-	70	58.203	ENSIPUG00000023635	-	95	59.643
ENSIPUG00000015121	-	80	31.081	ENSIPUG00000018102	znf646	79	31.081
ENSIPUG00000015121	-	89	45.263	ENSIPUG00000022741	-	98	45.977
ENSIPUG00000015121	-	72	34.307	ENSIPUG00000015037	znf711	53	34.307
ENSIPUG00000015121	-	58	61.233	ENSIPUG00000021998	-	93	61.233
ENSIPUG00000015121	-	71	41.007	ENSIPUG00000004905	znf236	57	41.007
ENSIPUG00000015121	-	76	52.903	ENSIPUG00000022751	-	95	59.859
ENSIPUG00000015121	-	71	58.462	ENSIPUG00000023688	-	99	58.462
ENSIPUG00000015121	-	62	41.892	ENSIPUG00000001248	prdm5	73	41.892
ENSIPUG00000015121	-	61	43.925	ENSIPUG00000024007	-	54	43.925
ENSIPUG00000015121	-	59	44.330	ENSIPUG00000005547	-	56	44.330
ENSIPUG00000015121	-	56	49.425	ENSIPUG00000020760	-	61	49.425
ENSIPUG00000015121	-	56	36.364	ENSIPUG00000002075	znf341	50	36.364
ENSIPUG00000015121	-	99	69.565	ENSIPUG00000015294	-	100	63.333
ENSIPUG00000015121	-	71	50.562	ENSIPUG00000016009	znf596	73	50.562
ENSIPUG00000015121	-	59	59.633	ENSIPUG00000005581	-	77	59.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015121	-	71	47.964	ENSATEG00000010859	-	98	44.015	Anabas_testudineus
ENSIPUG00000015121	-	60	54.603	ENSAMXG00000042633	-	97	54.636	Astyanax_mexicanus
ENSIPUG00000015121	-	59	62.816	ENSAMXG00000039432	-	99	62.816	Astyanax_mexicanus
ENSIPUG00000015121	-	70	61.806	ENSAMXG00000013274	-	97	58.805	Astyanax_mexicanus
ENSIPUG00000015121	-	71	54.422	ENSAMXG00000029960	-	96	54.422	Astyanax_mexicanus
ENSIPUG00000015121	-	56	61.765	ENSAMXG00000039700	-	89	60.526	Astyanax_mexicanus
ENSIPUG00000015121	-	59	61.011	ENSAMXG00000031794	-	99	61.011	Astyanax_mexicanus
ENSIPUG00000015121	-	63	61.538	ENSAMXG00000042593	-	99	61.538	Astyanax_mexicanus
ENSIPUG00000015121	-	72	63.423	ENSAMXG00000039977	-	95	63.423	Astyanax_mexicanus
ENSIPUG00000015121	-	57	56.000	ENSCPBG00000009849	-	79	56.000	Chrysemys_picta_bellii
ENSIPUG00000015121	-	71	54.065	ENSELUG00000009575	-	99	49.306	Esox_lucius
ENSIPUG00000015121	-	84	43.359	ENSKMAG00000000543	-	98	42.708	Kryptolebias_marmoratus
ENSIPUG00000015121	-	71	40.514	ENSMAMG00000016519	-	91	42.029	Mastacembelus_armatus
ENSIPUG00000015121	-	59	45.918	ENSMZEG00005020574	-	88	45.918	Maylandia_zebra
ENSIPUG00000015121	-	71	37.217	ENSONIG00000007088	-	100	41.530	Oreochromis_niloticus
ENSIPUG00000015121	-	58	52.419	ENSPSIG00000000075	-	74	52.419	Pelodiscus_sinensis
ENSIPUG00000015121	-	67	59.623	ENSPNAG00000012215	-	99	59.623	Pygocentrus_nattereri
ENSIPUG00000015121	-	70	60.853	ENSPNAG00000008480	-	90	59.623	Pygocentrus_nattereri
ENSIPUG00000015121	-	73	42.466	ENSSMAG00000007396	-	79	42.466	Scophthalmus_maximus
ENSIPUG00000015121	-	59	55.311	ENSTBEG00000012287	-	99	55.311	Tupaia_belangeri