EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000015166 (Gene tree)
Gene ID: 108262751
Gene Symbol: sf3b5
Alias: Splicing factor 3B subunit 10|si:ch211-8a9.5|zgc:92874
Full Name: splicing factor 3b subunit 5
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 261 bases
Position: chr3:9726674-9726934
Accession: 108262751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000022364	SF3b10	PF07189.11	2.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000023326	-	261	XM_017463049	ENSIPUP00000022364	86 (aa)	XP_017318538	A0A2D0QJD7

Gene Model

Click here to download ENSIPUG00000015166's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015166's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015166	sf3b5	99	95.294	ENSG00000169976	SF3B5	99	95.294	Homo_sapiens
ENSIPUG00000015166	sf3b5	100	96.512	ENSAPOG00000001721	sf3b5	100	96.512	Acanthochromis_polyacanthus
ENSIPUG00000015166	sf3b5	100	96.512	ENSACIG00000008106	sf3b5	100	96.512	Amphilophus_citrinellus
ENSIPUG00000015166	sf3b5	100	96.512	ENSAOCG00000023367	sf3b5	100	96.512	Amphiprion_ocellaris
ENSIPUG00000015166	sf3b5	100	96.512	ENSAPEG00000004605	sf3b5	100	96.512	Amphiprion_percula
ENSIPUG00000015166	sf3b5	100	97.674	ENSATEG00000009720	sf3b5	100	97.674	Anabas_testudineus
ENSIPUG00000015166	sf3b5	100	91.860	ENSACAG00000007948	SF3B5	100	91.860	Anolis_carolinensis
ENSIPUG00000015166	sf3b5	99	95.294	ENSANAG00000019999	SF3B5	99	95.294	Aotus_nancymaae
ENSIPUG00000015166	sf3b5	100	96.512	ENSACLG00000022410	sf3b5	100	96.512	Astatotilapia_calliptera
ENSIPUG00000015166	sf3b5	99	95.294	ENSBTAG00000009795	SF3B5	99	95.294	Bos_taurus
ENSIPUG00000015166	sf3b5	99	95.294	ENSCJAG00000046566	SF3B5	99	95.294	Callithrix_jacchus
ENSIPUG00000015166	sf3b5	99	95.294	ENSCAFG00000032495	SF3B5	99	95.294	Canis_familiaris
ENSIPUG00000015166	sf3b5	99	95.294	ENSCAFG00020000873	SF3B5	99	95.294	Canis_lupus_dingo
ENSIPUG00000015166	sf3b5	99	95.294	ENSCHIG00000007987	SF3B5	99	95.294	Capra_hircus
ENSIPUG00000015166	sf3b5	99	95.294	ENSTSYG00000012236	SF3B5	99	95.294	Carlito_syrichta
ENSIPUG00000015166	sf3b5	99	95.294	ENSCPOG00000012435	SF3B5	99	95.294	Cavia_porcellus
ENSIPUG00000015166	sf3b5	99	95.294	ENSCCAG00000006528	SF3B5	99	95.294	Cebus_capucinus
ENSIPUG00000015166	sf3b5	99	95.294	ENSCATG00000010192	SF3B5	99	95.294	Cercocebus_atys
ENSIPUG00000015166	sf3b5	99	95.294	ENSCLAG00000017802	SF3B5	99	95.294	Chinchilla_lanigera
ENSIPUG00000015166	sf3b5	99	95.294	ENSCSAG00000000187	SF3B5	99	95.294	Chlorocebus_sabaeus
ENSIPUG00000015166	sf3b5	100	94.186	ENSCPBG00000017148	SF3B5	100	94.186	Chrysemys_picta_bellii
ENSIPUG00000015166	sf3b5	97	74.699	ENSCING00000021953	-	97	74.699	Ciona_intestinalis
ENSIPUG00000015166	sf3b5	99	95.294	ENSCANG00000002639	SF3B5	99	95.294	Colobus_angolensis_palliatus
ENSIPUG00000015166	sf3b5	99	94.118	ENSCGRG00001007249	Sf3b5	99	94.118	Cricetulus_griseus_chok1gshd
ENSIPUG00000015166	sf3b5	99	94.118	ENSCGRG00000019185	Sf3b5	99	94.118	Cricetulus_griseus_crigri
ENSIPUG00000015166	sf3b5	100	96.512	ENSCSEG00000003216	sf3b5	100	96.512	Cynoglossus_semilaevis
ENSIPUG00000015166	sf3b5	100	97.674	ENSCVAG00000005040	sf3b5	100	97.674	Cyprinodon_variegatus
ENSIPUG00000015166	sf3b5	100	95.349	ENSDARG00000016855	sf3b5	100	95.349	Danio_rerio
ENSIPUG00000015166	sf3b5	99	95.294	ENSDNOG00000048829	SF3B5	81	95.294	Dasypus_novemcinctus
ENSIPUG00000015166	sf3b5	99	95.294	ENSDORG00000005838	Sf3b5	99	95.294	Dipodomys_ordii
ENSIPUG00000015166	sf3b5	99	83.529	FBgn0040534	Sf3b5	100	83.529	Drosophila_melanogaster
ENSIPUG00000015166	sf3b5	99	95.294	ENSETEG00000004047	SF3B5	99	95.294	Echinops_telfairi
ENSIPUG00000015166	sf3b5	99	82.353	ENSEBUG00000002311	sf3b5	100	82.353	Eptatretus_burgeri
ENSIPUG00000015166	sf3b5	99	95.294	ENSEASG00005009522	SF3B5	99	95.294	Equus_asinus_asinus
ENSIPUG00000015166	sf3b5	99	95.294	ENSECAG00000005457	SF3B5	99	95.294	Equus_caballus
ENSIPUG00000015166	sf3b5	100	96.512	ENSELUG00000014290	SF3B5	100	96.512	Esox_lucius
ENSIPUG00000015166	sf3b5	99	95.294	ENSFCAG00000000936	SF3B5	99	95.294	Felis_catus
ENSIPUG00000015166	sf3b5	100	90.698	ENSFALG00000015012	SF3B5	100	90.698	Ficedula_albicollis
ENSIPUG00000015166	sf3b5	99	95.294	ENSFDAG00000003664	SF3B5	99	95.294	Fukomys_damarensis
ENSIPUG00000015166	sf3b5	100	97.674	ENSFHEG00000020301	sf3b5	100	97.674	Fundulus_heteroclitus
ENSIPUG00000015166	sf3b5	100	95.349	ENSGMOG00000019972	sf3b5	100	95.349	Gadus_morhua
ENSIPUG00000015166	sf3b5	100	93.023	ENSGALG00000030824	SF3B5	100	93.023	Gallus_gallus
ENSIPUG00000015166	sf3b5	100	97.674	ENSGAFG00000000271	sf3b5	100	97.674	Gambusia_affinis
ENSIPUG00000015166	sf3b5	100	97.674	ENSGACG00000010363	sf3b5	100	97.674	Gasterosteus_aculeatus
ENSIPUG00000015166	sf3b5	100	88.372	ENSGAGG00000000646	-	100	88.372	Gopherus_agassizii
ENSIPUG00000015166	sf3b5	100	94.186	ENSGAGG00000011434	SF3B5	100	94.186	Gopherus_agassizii
ENSIPUG00000015166	sf3b5	99	95.294	ENSGGOG00000001537	SF3B5	99	95.294	Gorilla_gorilla
ENSIPUG00000015166	sf3b5	100	96.512	ENSHBUG00000008925	sf3b5	100	96.512	Haplochromis_burtoni
ENSIPUG00000015166	sf3b5	99	95.294	ENSHGLG00000021406	SF3B5	99	95.294	Heterocephalus_glaber_female
ENSIPUG00000015166	sf3b5	99	95.294	ENSHGLG00100020370	SF3B5	99	95.294	Heterocephalus_glaber_male
ENSIPUG00000015166	sf3b5	100	96.512	ENSHCOG00000009115	-	100	96.512	Hippocampus_comes
ENSIPUG00000015166	sf3b5	100	96.512	ENSHCOG00000016806	sf3b5	100	96.512	Hippocampus_comes
ENSIPUG00000015166	sf3b5	100	96.512	ENSHCOG00000016802	sf3b5	100	96.512	Hippocampus_comes
ENSIPUG00000015166	sf3b5	99	95.294	ENSSTOG00000003347	SF3B5	99	95.294	Ictidomys_tridecemlineatus
ENSIPUG00000015166	sf3b5	99	95.294	ENSJJAG00000001857	Sf3b5	99	95.294	Jaculus_jaculus
ENSIPUG00000015166	sf3b5	100	97.674	ENSKMAG00000002249	sf3b5	100	97.674	Kryptolebias_marmoratus
ENSIPUG00000015166	sf3b5	100	97.674	ENSLBEG00000019847	sf3b5	100	97.674	Labrus_bergylta
ENSIPUG00000015166	sf3b5	100	94.186	ENSLACG00000000946	SF3B5	100	94.186	Latimeria_chalumnae
ENSIPUG00000015166	sf3b5	100	98.837	ENSLOCG00000017352	sf3b5	100	98.837	Lepisosteus_oculatus
ENSIPUG00000015166	sf3b5	99	95.294	ENSLAFG00000032489	SF3B5	99	95.294	Loxodonta_africana
ENSIPUG00000015166	sf3b5	99	95.294	ENSMFAG00000029753	SF3B5	99	95.294	Macaca_fascicularis
ENSIPUG00000015166	sf3b5	99	95.294	ENSMMUG00000047691	SF3B5	99	95.294	Macaca_mulatta
ENSIPUG00000015166	sf3b5	99	95.294	ENSMNEG00000028236	SF3B5	99	95.294	Macaca_nemestrina
ENSIPUG00000015166	sf3b5	99	95.294	ENSMLEG00000007622	SF3B5	99	95.294	Mandrillus_leucophaeus
ENSIPUG00000015166	sf3b5	100	96.512	ENSMAMG00000021639	sf3b5	100	96.512	Mastacembelus_armatus
ENSIPUG00000015166	sf3b5	100	96.512	ENSMZEG00005028115	SF3B5	100	96.512	Maylandia_zebra
ENSIPUG00000015166	sf3b5	100	96.512	ENSMZEG00005027408	sf3b5	100	96.512	Maylandia_zebra
ENSIPUG00000015166	sf3b5	100	84.884	ENSMZEG00005027407	sf3b5	100	84.884	Maylandia_zebra
ENSIPUG00000015166	sf3b5	100	93.023	ENSMGAG00000015849	SF3B5	100	93.023	Meleagris_gallopavo
ENSIPUG00000015166	sf3b5	99	94.118	ENSMAUG00000008283	Sf3b5	99	94.118	Mesocricetus_auratus
ENSIPUG00000015166	sf3b5	99	95.294	ENSMICG00000014922	SF3B5	99	95.294	Microcebus_murinus
ENSIPUG00000015166	sf3b5	99	94.118	ENSMOCG00000001713	Sf3b5	99	94.118	Microtus_ochrogaster
ENSIPUG00000015166	sf3b5	100	96.512	ENSMMOG00000007956	sf3b5	100	96.512	Mola_mola
ENSIPUG00000015166	sf3b5	99	95.294	ENSMODG00000023291	SF3B5	83	95.294	Monodelphis_domestica
ENSIPUG00000015166	sf3b5	91	95.062	ENSMALG00000020357	sf3b5	99	95.062	Monopterus_albus
ENSIPUG00000015166	sf3b5	99	94.118	MGP_CAROLIEiJ_G0015120	Sf3b5	99	94.118	Mus_caroli
ENSIPUG00000015166	sf3b5	99	94.118	ENSMUSG00000078348	Sf3b5	99	94.118	Mus_musculus
ENSIPUG00000015166	sf3b5	99	94.118	MGP_PahariEiJ_G0023739	Sf3b5	99	94.118	Mus_pahari
ENSIPUG00000015166	sf3b5	99	94.118	MGP_SPRETEiJ_G0015928	Sf3b5	99	94.118	Mus_spretus
ENSIPUG00000015166	sf3b5	99	95.294	ENSMPUG00000018379	SF3B5	99	95.294	Mustela_putorius_furo
ENSIPUG00000015166	sf3b5	99	92.941	ENSMLUG00000010802	-	99	92.941	Myotis_lucifugus
ENSIPUG00000015166	sf3b5	99	95.294	ENSMLUG00000028504	-	99	95.294	Myotis_lucifugus
ENSIPUG00000015166	sf3b5	93	95.000	ENSMLUG00000025546	-	93	95.000	Myotis_lucifugus
ENSIPUG00000015166	sf3b5	99	95.294	ENSNGAG00000010732	Sf3b5	99	95.294	Nannospalax_galili
ENSIPUG00000015166	sf3b5	100	96.512	ENSNBRG00000014383	sf3b5	100	96.512	Neolamprologus_brichardi
ENSIPUG00000015166	sf3b5	99	95.294	ENSNLEG00000019307	SF3B5	99	95.294	Nomascus_leucogenys
ENSIPUG00000015166	sf3b5	99	95.294	ENSMEUG00000005440	-	99	95.294	Notamacropus_eugenii
ENSIPUG00000015166	sf3b5	99	95.294	ENSMEUG00000005445	-	99	95.294	Notamacropus_eugenii
ENSIPUG00000015166	sf3b5	99	94.118	ENSOPRG00000015107	SF3B5	99	94.118	Ochotona_princeps
ENSIPUG00000015166	sf3b5	99	95.294	ENSODEG00000019507	SF3B5	99	95.294	Octodon_degus
ENSIPUG00000015166	sf3b5	100	96.512	ENSONIG00000020725	sf3b5	100	96.512	Oreochromis_niloticus
ENSIPUG00000015166	sf3b5	67	94.828	ENSOANG00000015301	SF3B5	95	94.828	Ornithorhynchus_anatinus
ENSIPUG00000015166	sf3b5	99	95.294	ENSOCUG00000008752	SF3B5	99	95.294	Oryctolagus_cuniculus
ENSIPUG00000015166	sf3b5	100	97.674	ENSORLG00000004925	sf3b5	100	97.674	Oryzias_latipes
ENSIPUG00000015166	sf3b5	100	97.674	ENSORLG00020011625	sf3b5	100	97.674	Oryzias_latipes_hni
ENSIPUG00000015166	sf3b5	100	97.674	ENSORLG00015017061	sf3b5	100	97.674	Oryzias_latipes_hsok
ENSIPUG00000015166	sf3b5	100	97.674	ENSOMEG00000010620	sf3b5	100	97.674	Oryzias_melastigma
ENSIPUG00000015166	sf3b5	99	95.294	ENSOGAG00000012152	SF3B5	99	95.294	Otolemur_garnettii
ENSIPUG00000015166	sf3b5	92	94.937	ENSOARG00000019486	-	95	94.937	Ovis_aries
ENSIPUG00000015166	sf3b5	99	91.765	ENSOARG00000002617	SF3B5	99	91.765	Ovis_aries
ENSIPUG00000015166	sf3b5	99	95.294	ENSPPAG00000012940	SF3B5	99	95.294	Pan_paniscus
ENSIPUG00000015166	sf3b5	99	95.294	ENSPPRG00000021262	SF3B5	99	95.294	Panthera_pardus
ENSIPUG00000015166	sf3b5	99	95.294	ENSPTIG00000001952	SF3B5	99	95.294	Panthera_tigris_altaica
ENSIPUG00000015166	sf3b5	99	95.294	ENSPTRG00000018676	SF3B5	99	95.294	Pan_troglodytes
ENSIPUG00000015166	sf3b5	99	95.294	ENSPANG00000034242	SF3B5	99	95.294	Papio_anubis
ENSIPUG00000015166	sf3b5	100	96.512	ENSPKIG00000006057	sf3b5	100	96.512	Paramormyrops_kingsleyae
ENSIPUG00000015166	sf3b5	100	94.186	ENSPSIG00000001262	SF3B5	100	94.186	Pelodiscus_sinensis
ENSIPUG00000015166	sf3b5	100	96.512	ENSPMGG00000014804	sf3b5	100	96.512	Periophthalmus_magnuspinnatus
ENSIPUG00000015166	sf3b5	99	94.118	ENSPEMG00000012931	Sf3b5	99	94.118	Peromyscus_maniculatus_bairdii
ENSIPUG00000015166	sf3b5	100	90.698	ENSPMAG00000010296	sf3b5	100	90.698	Petromyzon_marinus
ENSIPUG00000015166	sf3b5	99	74.118	ENSPCIG00000025007	-	99	74.118	Phascolarctos_cinereus
ENSIPUG00000015166	sf3b5	93	96.250	ENSPCIG00000011344	-	78	96.250	Phascolarctos_cinereus
ENSIPUG00000015166	sf3b5	100	97.674	ENSPFOG00000019994	sf3b5	100	97.674	Poecilia_formosa
ENSIPUG00000015166	sf3b5	100	97.674	ENSPLAG00000008412	sf3b5	100	97.674	Poecilia_latipinna
ENSIPUG00000015166	sf3b5	100	97.674	ENSPMEG00000020050	sf3b5	100	97.674	Poecilia_mexicana
ENSIPUG00000015166	sf3b5	100	97.674	ENSPREG00000009242	sf3b5	100	97.674	Poecilia_reticulata
ENSIPUG00000015166	sf3b5	99	95.294	ENSPPYG00000017068	SF3B5	99	95.294	Pongo_abelii
ENSIPUG00000015166	sf3b5	99	95.294	ENSPCAG00000009332	SF3B5	99	95.294	Procavia_capensis
ENSIPUG00000015166	sf3b5	99	95.294	ENSPCOG00000013754	SF3B5	99	95.294	Propithecus_coquereli
ENSIPUG00000015166	sf3b5	56	97.917	ENSPVAG00000002820	SF3B5	100	97.917	Pteropus_vampyrus
ENSIPUG00000015166	sf3b5	100	96.512	ENSPNYG00000002075	sf3b5	100	96.512	Pundamilia_nyererei
ENSIPUG00000015166	sf3b5	100	98.837	ENSPNAG00000004942	sf3b5	100	98.837	Pygocentrus_nattereri
ENSIPUG00000015166	sf3b5	99	94.118	ENSRNOG00000014908	Sf3b5	99	94.118	Rattus_norvegicus
ENSIPUG00000015166	sf3b5	99	95.294	ENSRBIG00000006301	SF3B5	99	95.294	Rhinopithecus_bieti
ENSIPUG00000015166	sf3b5	99	95.294	ENSRROG00000037067	SF3B5	99	95.294	Rhinopithecus_roxellana
ENSIPUG00000015166	sf3b5	99	95.294	ENSSBOG00000006122	SF3B5	99	95.294	Saimiri_boliviensis_boliviensis
ENSIPUG00000015166	sf3b5	99	94.118	ENSSHAG00000015670	SF3B5	99	94.118	Sarcophilus_harrisii
ENSIPUG00000015166	sf3b5	100	95.349	ENSSFOG00015015767	sf3b5	100	95.349	Scleropages_formosus
ENSIPUG00000015166	sf3b5	100	96.512	ENSSMAG00000018852	sf3b5	100	96.512	Scophthalmus_maximus
ENSIPUG00000015166	sf3b5	100	97.674	ENSSDUG00000018161	sf3b5	100	97.674	Seriola_dumerili
ENSIPUG00000015166	sf3b5	100	97.674	ENSSLDG00000014547	sf3b5	100	97.674	Seriola_lalandi_dorsalis
ENSIPUG00000015166	sf3b5	99	95.294	ENSSARG00000007820	SF3B5	99	95.294	Sorex_araneus
ENSIPUG00000015166	sf3b5	100	96.512	ENSSPAG00000009244	sf3b5	100	96.512	Stegastes_partitus
ENSIPUG00000015166	sf3b5	100	96.512	ENSSPAG00000017371	-	100	96.512	Stegastes_partitus
ENSIPUG00000015166	sf3b5	99	95.294	ENSSSCG00000035578	SF3B5	99	95.294	Sus_scrofa
ENSIPUG00000015166	sf3b5	100	93.023	ENSTGUG00000010810	SF3B5	100	93.023	Taeniopygia_guttata
ENSIPUG00000015166	sf3b5	100	95.349	ENSTRUG00000005577	sf3b5	100	95.349	Takifugu_rubripes
ENSIPUG00000015166	sf3b5	100	95.349	ENSTNIG00000001265	sf3b5	100	95.349	Tetraodon_nigroviridis
ENSIPUG00000015166	sf3b5	99	96.471	ENSTBEG00000003072	SF3B5	99	96.471	Tupaia_belangeri
ENSIPUG00000015166	sf3b5	99	95.294	ENSTTRG00000008817	SF3B5	99	95.294	Tursiops_truncatus
ENSIPUG00000015166	sf3b5	99	95.294	ENSUAMG00000027296	SF3B5	99	95.294	Ursus_americanus
ENSIPUG00000015166	sf3b5	99	95.294	ENSUMAG00000005448	SF3B5	99	95.294	Ursus_maritimus
ENSIPUG00000015166	sf3b5	99	95.294	ENSVPAG00000003826	SF3B5	99	95.294	Vicugna_pacos
ENSIPUG00000015166	sf3b5	99	95.294	ENSVVUG00000004703	SF3B5	99	95.294	Vulpes_vulpes
ENSIPUG00000015166	sf3b5	100	95.349	ENSXETG00000021409	sf3b5	100	95.349	Xenopus_tropicalis
ENSIPUG00000015166	sf3b5	100	97.674	ENSXMAG00000019971	sf3b5	100	97.674	Xiphophorus_maculatus