EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000015203 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 9252 bases
Position: chr25:286897-296148
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000022416	zf-C2H2	PF00096.26	5.4e-38	1	7
ENSIPUP00000022416	zf-C2H2	PF00096.26	5.4e-38	2	7
ENSIPUP00000022416	zf-C2H2	PF00096.26	5.4e-38	3	7
ENSIPUP00000022416	zf-C2H2	PF00096.26	5.4e-38	4	7
ENSIPUP00000022416	zf-C2H2	PF00096.26	5.4e-38	5	7
ENSIPUP00000022416	zf-C2H2	PF00096.26	5.4e-38	6	7
ENSIPUP00000022416	zf-C2H2	PF00096.26	5.4e-38	7	7
ENSIPUP00000022416	zf-met	PF12874.7	1.3e-06	1	2
ENSIPUP00000022416	zf-met	PF12874.7	1.3e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000023380	-	3653	-	ENSIPUP00000022416	410 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000015203's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015203's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000015203	-	64	45.370	ENSIPUG00000004905	znf236	59	45.370
ENSIPUG00000015203	-	87	67.568	ENSIPUG00000015601	-	94	60.274
ENSIPUG00000015203	-	55	56.842	ENSIPUG00000004428	-	88	56.842
ENSIPUG00000015203	-	77	58.929	ENSIPUG00000022751	-	96	58.247
ENSIPUG00000015203	-	63	62.051	ENSIPUG00000021998	-	91	62.051
ENSIPUG00000015203	-	50	50.667	ENSIPUG00000014394	si:dkey-7l6.3	53	50.667
ENSIPUG00000015203	-	65	38.000	ENSIPUG00000011258	-	89	35.096
ENSIPUG00000015203	-	54	33.129	ENSIPUG00000024004	-	79	33.129
ENSIPUG00000015203	-	63	62.366	ENSIPUG00000007934	-	95	62.366
ENSIPUG00000015203	-	67	34.848	ENSIPUG00000015037	znf711	54	34.673
ENSIPUG00000015203	-	63	58.247	ENSIPUG00000021434	-	91	58.247
ENSIPUG00000015203	-	97	68.229	ENSIPUG00000015468	-	100	68.229
ENSIPUG00000015203	-	63	58.659	ENSIPUG00000021484	-	98	58.659
ENSIPUG00000015203	-	66	61.871	ENSIPUG00000012960	-	95	61.871
ENSIPUG00000015203	-	65	64.535	ENSIPUG00000009750	-	96	64.535
ENSIPUG00000015203	-	52	47.236	ENSIPUG00000016009	znf596	73	43.293
ENSIPUG00000015203	-	66	53.846	ENSIPUG00000021472	-	93	53.846
ENSIPUG00000015203	-	94	53.448	ENSIPUG00000013083	-	60	53.448
ENSIPUG00000015203	-	63	61.404	ENSIPUG00000001941	-	91	56.701
ENSIPUG00000015203	-	97	67.593	ENSIPUG00000015294	-	100	61.780
ENSIPUG00000015203	-	56	42.051	ENSIPUG00000007076	-	89	37.500
ENSIPUG00000015203	-	67	43.448	ENSIPUG00000001248	prdm5	77	41.919
ENSIPUG00000015203	-	86	48.969	ENSIPUG00000013315	-	95	48.969
ENSIPUG00000015203	-	63	37.500	ENSIPUG00000005547	-	59	37.500
ENSIPUG00000015203	-	67	66.857	ENSIPUG00000015400	-	95	66.857
ENSIPUG00000015203	-	53	62.176	ENSIPUG00000002655	-	97	62.176
ENSIPUG00000015203	-	64	36.567	ENSIPUG00000000131	snai2	51	37.500
ENSIPUG00000015203	-	100	74.788	ENSIPUG00000015177	-	86	75.802
ENSIPUG00000015203	-	68	46.763	ENSIPUG00000012109	ZN12	51	46.763
ENSIPUG00000015203	-	63	55.208	ENSIPUG00000023761	-	61	55.208
ENSIPUG00000015203	-	64	54.854	ENSIPUG00000021527	-	97	54.854
ENSIPUG00000015203	-	70	56.938	ENSIPUG00000013065	-	93	60.000
ENSIPUG00000015203	-	72	42.424	ENSIPUG00000008581	znf319b	92	42.424
ENSIPUG00000015203	-	68	59.603	ENSIPUG00000021441	-	97	59.603
ENSIPUG00000015203	-	65	35.468	ENSIPUG00000018102	znf646	77	35.468
ENSIPUG00000015203	-	100	50.696	ENSIPUG00000015233	-	81	57.353
ENSIPUG00000015203	-	97	54.607	ENSIPUG00000015121	-	99	56.818
ENSIPUG00000015203	-	64	35.802	ENSIPUG00000013526	-	82	35.802
ENSIPUG00000015203	-	67	51.812	ENSIPUG00000017575	-	64	52.174
ENSIPUG00000015203	-	65	50.350	ENSIPUG00000006936	-	99	49.807
ENSIPUG00000015203	-	63	63.830	ENSIPUG00000011073	-	97	63.830
ENSIPUG00000015203	-	66	43.284	ENSIPUG00000011652	znf648	84	39.091
ENSIPUG00000015203	-	83	48.649	ENSIPUG00000006916	-	87	55.941
ENSIPUG00000015203	-	63	60.914	ENSIPUG00000023635	-	99	56.818
ENSIPUG00000015203	-	78	56.522	ENSIPUG00000022741	-	98	56.522
ENSIPUG00000015203	-	88	62.195	ENSIPUG00000016075	-	95	62.887
ENSIPUG00000015203	-	68	40.146	ENSIPUG00000012830	-	78	43.421
ENSIPUG00000015203	-	59	61.856	ENSIPUG00000021515	-	94	61.856
ENSIPUG00000015203	-	96	58.333	ENSIPUG00000023513	-	98	58.333
ENSIPUG00000015203	-	68	59.896	ENSIPUG00000023688	-	97	60.849
ENSIPUG00000015203	-	63	59.524	ENSIPUG00000021518	-	86	57.000
ENSIPUG00000015203	-	63	50.980	ENSIPUG00000005733	-	81	59.794
ENSIPUG00000015203	-	91	44.330	ENSIPUG00000019205	-	79	44.330
ENSIPUG00000015203	-	67	61.062	ENSIPUG00000003011	-	58	61.062
ENSIPUG00000015203	-	64	48.969	ENSIPUG00000022266	ZNF135	61	48.969
ENSIPUG00000015203	-	70	59.677	ENSIPUG00000005581	-	91	59.677
ENSIPUG00000015203	-	65	33.161	ENSIPUG00000002075	znf341	51	33.161
ENSIPUG00000015203	-	64	56.410	ENSIPUG00000021556	-	98	56.410

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015203	-	63	63.314	ENSAMXG00000035683	-	92	63.314	Astyanax_mexicanus
ENSIPUG00000015203	-	63	52.023	ENSCPBG00000002063	-	54	52.023	Chrysemys_picta_bellii
ENSIPUG00000015203	-	50	47.973	ENSGAGG00000017640	-	65	47.973	Gopherus_agassizii
ENSIPUG00000015203	-	52	47.436	ENSHCOG00000014786	-	97	47.436	Hippocampus_comes
ENSIPUG00000015203	-	53	45.783	ENSORLG00020001707	-	82	45.783	Oryzias_latipes_hni
ENSIPUG00000015203	-	50	53.529	ENSPCIG00000019333	-	90	53.529	Phascolarctos_cinereus
ENSIPUG00000015203	-	63	51.408	ENSPFOG00000024567	-	99	50.000	Poecilia_formosa
ENSIPUG00000015203	-	63	43.902	ENSPMEG00000016762	-	83	43.902	Poecilia_mexicana
ENSIPUG00000015203	-	63	56.872	ENSPNAG00000008491	-	81	56.872	Pygocentrus_nattereri
ENSIPUG00000015203	-	70	56.024	ENSPNAG00000009741	-	74	55.030	Pygocentrus_nattereri
ENSIPUG00000015203	-	53	59.064	ENSPNAG00000018409	-	93	59.064	Pygocentrus_nattereri