EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000015205 (Gene tree)
Gene ID: 108269373
Gene Symbol: si:ch211-153b23.4
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: uncharacterized LOC108269373
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 7395 bases
Position: chr8:3068324-3075718
Accession: 108269373
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000022420	Sua5_yciO_yrdC	PF01300.18	1.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000023383	-	4021	XM_017475215	ENSIPUP00000022420	842 (aa)	XP_017330704	A0A2D0RJJ9

Gene Model

Click here to download ENSIPUG00000015205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015205's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015205	si:ch211-153b23.4	92	72.186	ENSAPOG00000006144	si:ch211-153b23.4	90	72.186	Acanthochromis_polyacanthus
ENSIPUG00000015205	si:ch211-153b23.4	98	69.119	ENSAPOG00000006178	si:ch211-153b23.4	94	69.119	Acanthochromis_polyacanthus
ENSIPUG00000015205	si:ch211-153b23.4	91	42.857	ENSACIG00000006968	si:ch211-153b23.3	100	42.857	Amphilophus_citrinellus
ENSIPUG00000015205	si:ch211-153b23.4	95	72.603	ENSACIG00000006997	si:ch211-153b23.4	94	72.603	Amphilophus_citrinellus
ENSIPUG00000015205	si:ch211-153b23.4	93	69.211	ENSAOCG00000010999	si:ch211-153b23.4	95	69.211	Amphiprion_ocellaris
ENSIPUG00000015205	si:ch211-153b23.4	96	69.042	ENSAPEG00000014665	si:ch211-153b23.4	95	69.042	Amphiprion_percula
ENSIPUG00000015205	si:ch211-153b23.4	98	72.014	ENSATEG00000004948	si:ch211-153b23.4	94	72.014	Anabas_testudineus
ENSIPUG00000015205	si:ch211-153b23.4	97	60.949	ENSAPLG00000013596	-	99	60.949	Anas_platyrhynchos
ENSIPUG00000015205	si:ch211-153b23.4	99	70.277	ENSACLG00000005471	si:ch211-153b23.4	94	70.277	Astatotilapia_calliptera
ENSIPUG00000015205	si:ch211-153b23.4	97	79.731	ENSAMXG00000013879	si:ch211-153b23.4	96	79.731	Astyanax_mexicanus
ENSIPUG00000015205	si:ch211-153b23.4	99	67.461	ENSCSEG00000014838	si:ch211-153b23.4	99	67.461	Cynoglossus_semilaevis
ENSIPUG00000015205	si:ch211-153b23.4	96	70.900	ENSCVAG00000021145	si:ch211-153b23.4	100	70.900	Cyprinodon_variegatus
ENSIPUG00000015205	si:ch211-153b23.4	99	74.910	ENSDARG00000077169	si:ch211-153b23.4	95	74.910	Danio_rerio
ENSIPUG00000015205	si:ch211-153b23.4	99	67.342	ENSELUG00000004961	si:ch211-153b23.4	94	67.342	Esox_lucius
ENSIPUG00000015205	si:ch211-153b23.4	97	57.843	ENSFALG00000011343	-	94	57.843	Ficedula_albicollis
ENSIPUG00000015205	si:ch211-153b23.4	84	77.612	ENSFHEG00000009888	si:ch211-153b23.4	78	77.612	Fundulus_heteroclitus
ENSIPUG00000015205	si:ch211-153b23.4	95	70.984	ENSFHEG00000010001	si:ch211-153b23.4	100	70.984	Fundulus_heteroclitus
ENSIPUG00000015205	si:ch211-153b23.4	89	69.814	ENSGAFG00000007442	si:ch211-153b23.4	92	70.817	Gambusia_affinis
ENSIPUG00000015205	si:ch211-153b23.4	75	31.394	ENSGAFG00000007455	si:ch211-153b23.3	72	31.394	Gambusia_affinis
ENSIPUG00000015205	si:ch211-153b23.4	99	69.560	ENSGACG00000018253	si:ch211-153b23.4	99	69.560	Gasterosteus_aculeatus
ENSIPUG00000015205	si:ch211-153b23.4	82	64.069	ENSGAGG00000024601	-	93	64.069	Gopherus_agassizii
ENSIPUG00000015205	si:ch211-153b23.4	80	70.431	ENSHBUG00000000013	si:ch211-153b23.4	89	70.431	Haplochromis_burtoni
ENSIPUG00000015205	si:ch211-153b23.4	97	71.691	ENSKMAG00000006829	si:ch211-153b23.4	99	71.691	Kryptolebias_marmoratus
ENSIPUG00000015205	si:ch211-153b23.4	99	70.828	ENSKMAG00000006919	-	95	70.828	Kryptolebias_marmoratus
ENSIPUG00000015205	si:ch211-153b23.4	99	70.778	ENSLBEG00000026309	si:ch211-153b23.4	95	70.778	Labrus_bergylta
ENSIPUG00000015205	si:ch211-153b23.4	99	63.321	ENSLACG00000017592	si:ch211-153b23.4	100	63.321	Latimeria_chalumnae
ENSIPUG00000015205	si:ch211-153b23.4	96	71.871	ENSMAMG00000009277	si:ch211-153b23.4	97	71.871	Mastacembelus_armatus
ENSIPUG00000015205	si:ch211-153b23.4	97	71.779	ENSMAMG00000009358	si:ch211-153b23.4	99	71.779	Mastacembelus_armatus
ENSIPUG00000015205	si:ch211-153b23.4	97	70.061	ENSMZEG00005011433	si:ch211-153b23.4	99	70.061	Maylandia_zebra
ENSIPUG00000015205	si:ch211-153b23.4	97	61.098	ENSMGAG00000005478	-	99	61.098	Meleagris_gallopavo
ENSIPUG00000015205	si:ch211-153b23.4	96	70.037	ENSMMOG00000004425	si:ch211-153b23.4	100	70.037	Mola_mola
ENSIPUG00000015205	si:ch211-153b23.4	95	70.338	ENSNBRG00000013392	si:ch211-153b23.4	100	70.338	Neolamprologus_brichardi
ENSIPUG00000015205	si:ch211-153b23.4	99	70.312	ENSONIG00000017875	si:ch211-153b23.4	95	70.312	Oreochromis_niloticus
ENSIPUG00000015205	si:ch211-153b23.4	99	69.351	ENSORLG00000006169	si:ch211-153b23.4	95	69.351	Oryzias_latipes
ENSIPUG00000015205	si:ch211-153b23.4	98	30.169	ENSORLG00000006161	si:ch211-153b23.3	99	30.169	Oryzias_latipes
ENSIPUG00000015205	si:ch211-153b23.4	99	69.591	ENSORLG00020009905	si:ch211-153b23.4	95	69.591	Oryzias_latipes_hni
ENSIPUG00000015205	si:ch211-153b23.4	99	69.591	ENSORLG00015003709	si:ch211-153b23.4	95	69.591	Oryzias_latipes_hsok
ENSIPUG00000015205	si:ch211-153b23.4	99	69.832	ENSOMEG00000007682	si:ch211-153b23.4	94	69.832	Oryzias_melastigma
ENSIPUG00000015205	si:ch211-153b23.4	100	68.327	ENSPKIG00000025681	si:ch211-153b23.4	98	68.327	Paramormyrops_kingsleyae
ENSIPUG00000015205	si:ch211-153b23.4	99	67.381	ENSPKIG00000014429	si:ch211-153b23.4	97	67.381	Paramormyrops_kingsleyae
ENSIPUG00000015205	si:ch211-153b23.4	94	57.663	ENSPMGG00000001313	si:ch211-153b23.4	88	57.915	Periophthalmus_magnuspinnatus
ENSIPUG00000015205	si:ch211-153b23.4	75	31.498	ENSPFOG00000012289	si:ch211-153b23.3	72	31.498	Poecilia_formosa
ENSIPUG00000015205	si:ch211-153b23.4	81	72.434	ENSPFOG00000012164	si:ch211-153b23.4	95	72.434	Poecilia_formosa
ENSIPUG00000015205	si:ch211-153b23.4	96	70.683	ENSPLAG00000016295	si:ch211-153b23.4	99	70.683	Poecilia_latipinna
ENSIPUG00000015205	si:ch211-153b23.4	75	31.087	ENSPMEG00000008884	si:ch211-153b23.3	72	31.087	Poecilia_mexicana
ENSIPUG00000015205	si:ch211-153b23.4	93	70.408	ENSPMEG00000007538	si:ch211-153b23.4	95	70.408	Poecilia_mexicana
ENSIPUG00000015205	si:ch211-153b23.4	97	70.061	ENSPNYG00000000250	si:ch211-153b23.4	99	70.061	Pundamilia_nyererei
ENSIPUG00000015205	si:ch211-153b23.4	99	82.241	ENSPNAG00000019554	si:ch211-153b23.4	95	82.241	Pygocentrus_nattereri
ENSIPUG00000015205	si:ch211-153b23.4	98	30.804	ENSPNAG00000019592	si:ch211-153b23.3	99	30.804	Pygocentrus_nattereri
ENSIPUG00000015205	si:ch211-153b23.4	99	73.565	ENSSFOG00015010891	si:ch211-153b23.4	96	73.565	Scleropages_formosus
ENSIPUG00000015205	si:ch211-153b23.4	99	67.685	ENSSFOG00015003920	-	96	67.685	Scleropages_formosus
ENSIPUG00000015205	si:ch211-153b23.4	98	71.773	ENSSMAG00000010067	si:ch211-153b23.4	96	71.773	Scophthalmus_maximus
ENSIPUG00000015205	si:ch211-153b23.4	80	68.499	ENSSDUG00000006931	si:ch211-153b23.4	92	68.499	Seriola_dumerili
ENSIPUG00000015205	si:ch211-153b23.4	82	71.218	ENSSDUG00000006842	si:ch211-153b23.4	88	71.218	Seriola_dumerili
ENSIPUG00000015205	si:ch211-153b23.4	96	70.530	ENSSDUG00000006671	si:ch211-153b23.4	100	70.530	Seriola_dumerili
ENSIPUG00000015205	si:ch211-153b23.4	56	35.084	ENSSLDG00000008629	si:ch211-153b23.3	53	35.084	Seriola_lalandi_dorsalis
ENSIPUG00000015205	si:ch211-153b23.4	97	61.077	ENSTGUG00000005499	-	99	61.077	Taeniopygia_guttata
ENSIPUG00000015205	si:ch211-153b23.4	96	69.592	ENSTRUG00000003247	si:ch211-153b23.4	99	69.592	Takifugu_rubripes
ENSIPUG00000015205	si:ch211-153b23.4	99	68.472	ENSTNIG00000008958	si:ch211-153b23.4	99	68.472	Tetraodon_nigroviridis
ENSIPUG00000015205	si:ch211-153b23.4	98	55.322	ENSXETG00000004489	-	93	55.322	Xenopus_tropicalis
ENSIPUG00000015205	si:ch211-153b23.4	96	71.358	ENSXMAG00000021388	si:ch211-153b23.4	99	71.411	Xiphophorus_maculatus
ENSIPUG00000015205	si:ch211-153b23.4	75	32.116	ENSXMAG00000029318	si:ch211-153b23.3	73	32.116	Xiphophorus_maculatus
ENSIPUG00000015205	si:ch211-153b23.4	96	70.864	ENSXMAG00000009416	-	95	70.864	Xiphophorus_maculatus