EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000015213 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: uncharacterized LOC108269387
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 3978 bases
Position: chr8:3085509-3089486
Accession: 108269387
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000022462	Sua5_yciO_yrdC	PF01300.18	1.6e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000023429	-	2592	XM_017475233	ENSIPUP00000022462	863 (aa)	XP_017330722	-

Gene Model

Click here to download ENSIPUG00000015213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015213's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015213	si:ch211-153b23.3	93	84.242	ENSACIG00000006968	si:ch211-153b23.3	100	64.692	Amphilophus_citrinellus
ENSIPUG00000015213	si:ch211-153b23.3	99	70.000	ENSAOCG00000010974	si:ch211-153b23.3	100	70.000	Amphiprion_ocellaris
ENSIPUG00000015213	si:ch211-153b23.3	50	35.080	ENSAPEG00000014665	si:ch211-153b23.4	52	35.080	Amphiprion_percula
ENSIPUG00000015213	si:ch211-153b23.3	99	70.227	ENSAPEG00000014700	si:ch211-153b23.3	100	70.227	Amphiprion_percula
ENSIPUG00000015213	si:ch211-153b23.3	99	71.946	ENSATEG00000004956	si:ch211-153b23.3	100	71.946	Anabas_testudineus
ENSIPUG00000015213	si:ch211-153b23.3	54	33.474	ENSAPLG00000013596	-	57	33.403	Anas_platyrhynchos
ENSIPUG00000015213	si:ch211-153b23.3	99	70.522	ENSACLG00000005894	si:ch211-153b23.3	100	70.615	Astatotilapia_calliptera
ENSIPUG00000015213	si:ch211-153b23.3	99	80.827	ENSAMXG00000038564	si:ch211-153b23.3	99	80.827	Astyanax_mexicanus
ENSIPUG00000015213	si:ch211-153b23.3	72	30.590	ENSAMXG00000013879	si:ch211-153b23.4	74	30.590	Astyanax_mexicanus
ENSIPUG00000015213	si:ch211-153b23.3	75	30.942	ENSCSEG00000014838	si:ch211-153b23.4	77	30.896	Cynoglossus_semilaevis
ENSIPUG00000015213	si:ch211-153b23.3	99	68.821	ENSCSEG00000014853	si:ch211-153b23.3	100	68.707	Cynoglossus_semilaevis
ENSIPUG00000015213	si:ch211-153b23.3	99	71.445	ENSCVAG00000021124	si:ch211-153b23.3	100	71.331	Cyprinodon_variegatus
ENSIPUG00000015213	si:ch211-153b23.3	72	30.696	ENSCVAG00000021145	si:ch211-153b23.4	77	30.696	Cyprinodon_variegatus
ENSIPUG00000015213	si:ch211-153b23.3	100	79.682	ENSDARG00000104919	si:ch211-153b23.3	100	79.682	Danio_rerio
ENSIPUG00000015213	si:ch211-153b23.3	87	83.740	ENSELUG00000004912	si:ch211-153b23.3	100	60.494	Esox_lucius
ENSIPUG00000015213	si:ch211-153b23.3	57	31.489	ENSFALG00000011343	-	60	31.489	Ficedula_albicollis
ENSIPUG00000015213	si:ch211-153b23.3	72	30.612	ENSFHEG00000010001	si:ch211-153b23.4	77	30.612	Fundulus_heteroclitus
ENSIPUG00000015213	si:ch211-153b23.3	100	71.056	ENSFHEG00000010030	si:ch211-153b23.3	100	71.056	Fundulus_heteroclitus
ENSIPUG00000015213	si:ch211-153b23.3	100	71.008	ENSGAFG00000007455	si:ch211-153b23.3	100	71.008	Gambusia_affinis
ENSIPUG00000015213	si:ch211-153b23.3	55	31.102	ENSGAGG00000024601	-	67	31.102	Gopherus_agassizii
ENSIPUG00000015213	si:ch211-153b23.3	99	70.635	ENSHBUG00000001760	si:ch211-153b23.3	100	70.635	Haplochromis_burtoni
ENSIPUG00000015213	si:ch211-153b23.3	72	30.612	ENSKMAG00000006919	-	70	30.612	Kryptolebias_marmoratus
ENSIPUG00000015213	si:ch211-153b23.3	100	71.169	ENSKMAG00000006792	si:ch211-153b23.3	100	71.169	Kryptolebias_marmoratus
ENSIPUG00000015213	si:ch211-153b23.3	71	30.284	ENSKMAG00000006829	si:ch211-153b23.4	76	30.284	Kryptolebias_marmoratus
ENSIPUG00000015213	si:ch211-153b23.3	100	70.588	ENSLBEG00000026324	si:ch211-153b23.3	100	70.588	Labrus_bergylta
ENSIPUG00000015213	si:ch211-153b23.3	54	35.699	ENSLACG00000017592	si:ch211-153b23.4	56	35.565	Latimeria_chalumnae
ENSIPUG00000015213	si:ch211-153b23.3	94	60.120	ENSLACG00000005800	-	99	60.479	Latimeria_chalumnae
ENSIPUG00000015213	si:ch211-153b23.3	85	63.265	ENSLOCG00000015063	si:ch211-153b23.3	98	63.265	Lepisosteus_oculatus
ENSIPUG00000015213	si:ch211-153b23.3	72	30.251	ENSMAMG00000009277	si:ch211-153b23.4	74	30.094	Mastacembelus_armatus
ENSIPUG00000015213	si:ch211-153b23.3	72	30.094	ENSMAMG00000009358	si:ch211-153b23.4	76	30.094	Mastacembelus_armatus
ENSIPUG00000015213	si:ch211-153b23.3	99	72.449	ENSMAMG00000009328	si:ch211-153b23.3	100	72.222	Mastacembelus_armatus
ENSIPUG00000015213	si:ch211-153b23.3	99	70.843	ENSMZEG00005011450	si:ch211-153b23.3	100	70.843	Maylandia_zebra
ENSIPUG00000015213	si:ch211-153b23.3	54	34.316	ENSMGAG00000005478	-	57	34.244	Meleagris_gallopavo
ENSIPUG00000015213	si:ch211-153b23.3	99	70.328	ENSMMOG00000004436	si:ch211-153b23.3	100	70.328	Mola_mola
ENSIPUG00000015213	si:ch211-153b23.3	99	70.957	ENSNBRG00000013370	si:ch211-153b23.3	100	70.957	Neolamprologus_brichardi
ENSIPUG00000015213	si:ch211-153b23.3	99	70.602	ENSORLG00000006161	si:ch211-153b23.3	99	70.602	Oryzias_latipes
ENSIPUG00000015213	si:ch211-153b23.3	97	71.040	ENSORLG00020000910	si:ch211-153b23.3	100	71.040	Oryzias_latipes_hni
ENSIPUG00000015213	si:ch211-153b23.3	97	70.401	ENSORLG00015003698	si:ch211-153b23.3	100	70.401	Oryzias_latipes_hsok
ENSIPUG00000015213	si:ch211-153b23.3	99	70.682	ENSOMEG00000007661	si:ch211-153b23.3	99	70.682	Oryzias_melastigma
ENSIPUG00000015213	si:ch211-153b23.3	97	73.436	ENSPKIG00000022450	si:ch211-153b23.3	100	73.436	Paramormyrops_kingsleyae
ENSIPUG00000015213	si:ch211-153b23.3	58	32.895	ENSPKIG00000014429	si:ch211-153b23.4	62	32.957	Paramormyrops_kingsleyae
ENSIPUG00000015213	si:ch211-153b23.3	99	51.782	ENSPKIG00000021029	-	99	51.505	Paramormyrops_kingsleyae
ENSIPUG00000015213	si:ch211-153b23.3	54	32.773	ENSPKIG00000025681	si:ch211-153b23.4	55	32.773	Paramormyrops_kingsleyae
ENSIPUG00000015213	si:ch211-153b23.3	91	71.429	ENSPMGG00000001311	si:ch211-153b23.3	100	71.429	Periophthalmus_magnuspinnatus
ENSIPUG00000015213	si:ch211-153b23.3	100	70.337	ENSPFOG00000012289	si:ch211-153b23.3	100	70.337	Poecilia_formosa
ENSIPUG00000015213	si:ch211-153b23.3	75	30.349	ENSPLAG00000016295	si:ch211-153b23.4	80	30.349	Poecilia_latipinna
ENSIPUG00000015213	si:ch211-153b23.3	99	70.843	ENSPLAG00000016320	si:ch211-153b23.3	100	70.843	Poecilia_latipinna
ENSIPUG00000015213	si:ch211-153b23.3	100	71.008	ENSPMEG00000008884	si:ch211-153b23.3	100	71.008	Poecilia_mexicana
ENSIPUG00000015213	si:ch211-153b23.3	99	70.408	ENSPNYG00000000251	si:ch211-153b23.3	100	70.408	Pundamilia_nyererei
ENSIPUG00000015213	si:ch211-153b23.3	100	85.405	ENSPNAG00000019592	si:ch211-153b23.3	100	85.405	Pygocentrus_nattereri
ENSIPUG00000015213	si:ch211-153b23.3	58	31.638	ENSSFOG00015003920	-	59	31.698	Scleropages_formosus
ENSIPUG00000015213	si:ch211-153b23.3	100	73.553	ENSSFOG00015010910	si:ch211-153b23.3	100	73.553	Scleropages_formosus
ENSIPUG00000015213	si:ch211-153b23.3	54	34.100	ENSSFOG00015010891	si:ch211-153b23.4	54	33.962	Scleropages_formosus
ENSIPUG00000015213	si:ch211-153b23.3	69	52.504	ENSSFOG00015009030	-	96	52.504	Scleropages_formosus
ENSIPUG00000015213	si:ch211-153b23.3	99	71.526	ENSSMAG00000005446	si:ch211-153b23.3	100	71.526	Scophthalmus_maximus
ENSIPUG00000015213	si:ch211-153b23.3	57	31.549	ENSSDUG00000006671	si:ch211-153b23.4	64	31.286	Seriola_dumerili
ENSIPUG00000015213	si:ch211-153b23.3	99	72.480	ENSSLDG00000008629	si:ch211-153b23.3	100	72.367	Seriola_lalandi_dorsalis
ENSIPUG00000015213	si:ch211-153b23.3	54	33.962	ENSTGUG00000005499	-	57	33.333	Taeniopygia_guttata
ENSIPUG00000015213	si:ch211-153b23.3	99	69.454	ENSTRUG00000020530	si:ch211-153b23.3	100	69.803	Takifugu_rubripes
ENSIPUG00000015213	si:ch211-153b23.3	100	65.252	ENSTNIG00000008962	si:ch211-153b23.3	100	65.252	Tetraodon_nigroviridis
ENSIPUG00000015213	si:ch211-153b23.3	72	30.455	ENSXMAG00000009416	-	73	30.455	Xiphophorus_maculatus
ENSIPUG00000015213	si:ch211-153b23.3	100	71.543	ENSXMAG00000029318	si:ch211-153b23.3	100	71.543	Xiphophorus_maculatus
ENSIPUG00000015213	si:ch211-153b23.3	72	30.612	ENSXMAG00000021388	si:ch211-153b23.4	74	30.612	Xiphophorus_maculatus