EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000015243 (Gene tree)
Gene ID: 108255174
Gene Symbol: -
Alias: -
Full Name: methyl-CpG-binding domain protein 1-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 23818 bases
Position: chr21:20736791-20760608
Accession: 108255174
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000022490	MBD	PF01429.19	6.8e-14	1	1
ENSIPUP00000022468	MBD	PF01429.19	6.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000023435	-	6076	XM_017450925	ENSIPUP00000022468	786 (aa)	XP_017306414	A0A2D0PK94
ENSIPUT00000023457	-	6046	XM_017450926	ENSIPUP00000022490	776 (aa)	XP_017306415	A0A2D0PMW7

Gene Model

Click here to download ENSIPUG00000015243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015243	-	50	50.602	ENSG00000141644	MBD1	70	58.065	Homo_sapiens
ENSIPUG00000015243	-	95	37.262	ENSAPOG00000012810	mbd1b	91	38.665	Acanthochromis_polyacanthus
ENSIPUG00000015243	-	94	36.940	ENSACIG00000010590	mbd1b	91	37.101	Amphilophus_citrinellus
ENSIPUG00000015243	-	96	37.485	ENSAOCG00000020272	mbd1b	93	38.519	Amphiprion_ocellaris
ENSIPUG00000015243	-	96	38.224	ENSAPEG00000023230	mbd1b	93	39.334	Amphiprion_percula
ENSIPUG00000015243	-	95	38.924	ENSATEG00000009608	mbd1b	92	38.972	Anabas_testudineus
ENSIPUG00000015243	-	51	30.969	ENSACAG00000006091	-	98	31.429	Anolis_carolinensis
ENSIPUG00000015243	-	50	37.086	ENSANAG00000036253	MBD1	62	38.650	Aotus_nancymaae
ENSIPUG00000015243	-	94	37.500	ENSACLG00000021383	mbd1b	90	38.490	Astatotilapia_calliptera
ENSIPUG00000015243	-	50	37.423	ENSBTAG00000003801	MBD1	58	37.888	Bos_taurus
ENSIPUG00000015243	-	50	37.748	ENSCJAG00000004959	MBD1	63	38.650	Callithrix_jacchus
ENSIPUG00000015243	-	50	56.923	ENSTSYG00000000509	MBD1	58	37.989	Carlito_syrichta
ENSIPUG00000015243	-	50	30.923	ENSCPOG00000001671	MBD1	61	31.931	Cavia_porcellus
ENSIPUG00000015243	-	50	37.576	ENSCCAG00000034600	MBD1	62	38.037	Cebus_capucinus
ENSIPUG00000015243	-	50	50.602	ENSCATG00000029959	MBD1	62	38.650	Cercocebus_atys
ENSIPUG00000015243	-	51	47.191	ENSCLAG00000007457	MBD1	58	35.754	Chinchilla_lanigera
ENSIPUG00000015243	-	50	50.602	ENSCANG00000033425	MBD1	60	50.602	Colobus_angolensis_palliatus
ENSIPUG00000015243	-	99	33.800	ENSCSEG00000009082	mbd1b	96	34.930	Cynoglossus_semilaevis
ENSIPUG00000015243	-	96	37.083	ENSCVAG00000001167	mbd1b	91	36.959	Cyprinodon_variegatus
ENSIPUG00000015243	-	96	39.927	ENSDARG00000025699	mbd1b	81	39.225	Danio_rerio
ENSIPUG00000015243	-	50	38.037	ENSEASG00005003857	MBD1	61	36.747	Equus_asinus_asinus
ENSIPUG00000015243	-	85	56.098	ENSELUG00000004375	mbd1b	80	56.209	Esox_lucius
ENSIPUG00000015243	-	50	39.735	ENSFCAG00000015730	MBD1	60	40.397	Felis_catus
ENSIPUG00000015243	-	97	36.975	ENSFHEG00000020120	mbd1b	93	36.131	Fundulus_heteroclitus
ENSIPUG00000015243	-	95	37.674	ENSGAFG00000008975	mbd1b	92	36.823	Gambusia_affinis
ENSIPUG00000015243	-	65	52.632	ENSGACG00000012106	-	93	52.632	Gasterosteus_aculeatus
ENSIPUG00000015243	-	50	50.602	ENSGGOG00000016966	MBD1	57	38.650	Gorilla_gorilla
ENSIPUG00000015243	-	94	37.438	ENSHBUG00000014270	mbd1b	90	38.937	Haplochromis_burtoni
ENSIPUG00000015243	-	99	34.462	ENSHCOG00000009952	mbd1b	96	35.468	Hippocampus_comes
ENSIPUG00000015243	-	90	36.242	ENSKMAG00000020760	mbd1b	90	36.445	Kryptolebias_marmoratus
ENSIPUG00000015243	-	72	39.877	ENSLACG00000002414	-	79	36.601	Latimeria_chalumnae
ENSIPUG00000015243	-	50	50.602	ENSMLEG00000043121	MBD1	62	38.650	Mandrillus_leucophaeus
ENSIPUG00000015243	-	63	39.847	ENSMAMG00000023341	-	74	40.039	Mastacembelus_armatus
ENSIPUG00000015243	-	94	37.500	ENSMZEG00005010421	mbd1b	90	38.738	Maylandia_zebra
ENSIPUG00000015243	-	68	50.980	ENSMMOG00000011607	mbd1b	79	71.429	Mola_mola
ENSIPUG00000015243	-	50	44.444	ENSMODG00000001286	-	73	36.607	Monodelphis_domestica
ENSIPUG00000015243	-	96	38.405	ENSMALG00000007808	mbd1b	93	39.454	Monopterus_albus
ENSIPUG00000015243	-	50	36.813	ENSMPUG00000008843	MBD1	56	37.912	Mustela_putorius_furo
ENSIPUG00000015243	-	50	50.602	ENSNLEG00000011661	-	62	36.145	Nomascus_leucogenys
ENSIPUG00000015243	-	95	37.235	ENSONIG00000020289	mbd1b	99	37.985	Oreochromis_niloticus
ENSIPUG00000015243	-	94	35.149	ENSORLG00000029390	mbd1b	92	36.319	Oryzias_latipes
ENSIPUG00000015243	-	96	35.401	ENSORLG00020000575	mbd1b	92	36.330	Oryzias_latipes_hni
ENSIPUG00000015243	-	96	35.273	ENSORLG00015014812	mbd1b	92	36.275	Oryzias_latipes_hsok
ENSIPUG00000015243	-	94	35.460	ENSOMEG00000023660	mbd1b	89	36.375	Oryzias_melastigma
ENSIPUG00000015243	-	50	50.602	ENSPPAG00000038886	MBD1	61	38.650	Pan_paniscus
ENSIPUG00000015243	-	50	39.735	ENSPPRG00000021387	MBD1	64	38.065	Panthera_pardus
ENSIPUG00000015243	-	50	39.735	ENSPTIG00000021231	MBD1	60	40.397	Panthera_tigris_altaica
ENSIPUG00000015243	-	50	50.602	ENSPTRG00000010021	MBD1	62	38.650	Pan_troglodytes
ENSIPUG00000015243	-	50	50.602	ENSPANG00000010867	MBD1	62	38.650	Papio_anubis
ENSIPUG00000015243	-	67	39.855	ENSPCIG00000027937	-	69	42.149	Phascolarctos_cinereus
ENSIPUG00000015243	-	95	35.154	ENSPFOG00000007511	mbd1b	95	38.619	Poecilia_formosa
ENSIPUG00000015243	-	90	37.317	ENSPLAG00000021258	mbd1b	91	36.625	Poecilia_latipinna
ENSIPUG00000015243	-	90	37.787	ENSPMEG00000024145	mbd1b	91	36.750	Poecilia_mexicana
ENSIPUG00000015243	-	90	37.849	ENSPREG00000021805	mbd1b	91	36.750	Poecilia_reticulata
ENSIPUG00000015243	-	99	57.228	ENSPNAG00000018075	mbd1b	97	57.587	Pygocentrus_nattereri
ENSIPUG00000015243	-	50	50.602	ENSRBIG00000041294	MBD1	61	30.769	Rhinopithecus_bieti
ENSIPUG00000015243	-	50	50.602	ENSRROG00000032517	MBD1	60	37.748	Rhinopithecus_roxellana
ENSIPUG00000015243	-	50	36.905	ENSSBOG00000027169	MBD1	63	38.650	Saimiri_boliviensis_boliviensis
ENSIPUG00000015243	-	97	38.375	ENSSFOG00015008591	-	87	39.006	Scleropages_formosus
ENSIPUG00000015243	-	85	49.367	ENSSMAG00000014640	mbd1b	82	38.471	Scophthalmus_maximus
ENSIPUG00000015243	-	85	50.633	ENSSDUG00000012996	mbd1b	86	38.670	Seriola_dumerili
ENSIPUG00000015243	-	75	53.247	ENSSLDG00000012422	mbd1b	81	51.299	Seriola_lalandi_dorsalis
ENSIPUG00000015243	-	95	37.944	ENSSPAG00000021447	mbd1b	92	38.556	Stegastes_partitus
ENSIPUG00000015243	-	50	55.385	ENSSSCG00000004516	MBD1	55	30.303	Sus_scrofa
ENSIPUG00000015243	-	95	37.736	ENSTRUG00000013422	mbd1b	92	37.178	Takifugu_rubripes
ENSIPUG00000015243	-	51	54.545	ENSTNIG00000007326	-	57	52.083	Tetraodon_nigroviridis
ENSIPUG00000015243	-	51	37.278	ENSUMAG00000002947	MBD1	57	38.065	Ursus_maritimus
ENSIPUG00000015243	-	95	37.358	ENSXMAG00000005628	mbd1b	90	36.750	Xiphophorus_maculatus