EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000015259 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: AF4/FMR2 family member 1-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 16654 bases
Position: chr18:7275303-7291956
Accession: 108279014
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000022488	AF-4	PF05110.13	4.4e-113	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000023455	-	1880	XM_017492890	ENSIPUP00000022488	564 (aa)	XP_017348379	-

Gene Model

Click here to download ENSIPUG00000015259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015259's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015259	-	54	36.443	ENSG00000144218	AFF3	75	55.396	Homo_sapiens
ENSIPUG00000015259	-	96	35.577	ENSAPOG00000002994	-	52	35.417	Acanthochromis_polyacanthus
ENSIPUG00000015259	-	96	34.762	ENSAOCG00000020283	-	51	34.609	Amphiprion_ocellaris
ENSIPUG00000015259	-	96	34.865	ENSAPEG00000018794	-	52	34.713	Amphiprion_percula
ENSIPUG00000015259	-	73	38.546	ENSACLG00000002905	-	51	35.207	Astatotilapia_calliptera
ENSIPUG00000015259	-	55	35.475	ENSCATG00000039501	AFF1	50	32.300	Cercocebus_atys
ENSIPUG00000015259	-	94	34.062	ENSCVAG00000015626	-	50	34.028	Cyprinodon_variegatus
ENSIPUG00000015259	-	99	43.396	ENSELUG00000019953	-	74	41.991	Esox_lucius
ENSIPUG00000015259	-	98	36.174	ENSGACG00000016333	-	50	36.334	Gasterosteus_aculeatus
ENSIPUG00000015259	-	73	37.637	ENSHBUG00000005828	-	51	33.768	Haplochromis_burtoni
ENSIPUG00000015259	-	74	61.224	ENSKMAG00000013113	-	50	34.966	Kryptolebias_marmoratus
ENSIPUG00000015259	-	96	34.944	ENSLBEG00000016928	-	52	33.805	Labrus_bergylta
ENSIPUG00000015259	-	99	40.917	ENSLOCG00000004025	AFF1	54	40.917	Lepisosteus_oculatus
ENSIPUG00000015259	-	96	38.322	ENSMAMG00000016189	-	50	36.688	Mastacembelus_armatus
ENSIPUG00000015259	-	73	38.767	ENSMZEG00005020442	-	50	35.372	Maylandia_zebra
ENSIPUG00000015259	-	95	34.354	ENSOMEG00000005799	-	60	34.512	Oryzias_melastigma
ENSIPUG00000015259	-	77	35.197	ENSPMEG00000020100	-	64	35.052	Poecilia_mexicana
ENSIPUG00000015259	-	96	31.057	ENSRBIG00000032242	AFF1	50	34.053	Rhinopithecus_bieti
ENSIPUG00000015259	-	96	40.336	ENSSFOG00015021743	-	52	40.196	Scleropages_formosus
ENSIPUG00000015259	-	96	35.599	ENSSMAG00000007062	-	50	34.790	Scophthalmus_maximus
ENSIPUG00000015259	-	96	36.349	ENSSDUG00000023775	-	82	36.248	Seriola_dumerili
ENSIPUG00000015259	-	96	36.262	ENSSLDG00000006836	-	50	36.089	Seriola_lalandi_dorsalis
ENSIPUG00000015259	-	96	35.016	ENSSPAG00000003972	-	54	34.195	Stegastes_partitus