EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000015364 (Gene tree)
Gene ID: 108255312
Gene Symbol: ptrh1
Alias: zgc:112961
Full Name: peptidyl-tRNA hydrolase 1 homolog
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 7379 bases
Position: chr22:11051558-11058936
Accession: 108255312
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000022693	Pept_tRNA_hydro	PF01195.19	6.2e-44	1	1
ENSIPUP00000022677	Pept_tRNA_hydro	PF01195.19	7.5e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000023651	-	2945	XM_017451198	ENSIPUP00000022677	272 (aa)	XP_017306687	W5UEH3
ENSIPUT00000023669	-	2599	XM_017451196	ENSIPUP00000022693	255 (aa)	XP_017306685	A0A2D0PL13

Gene Model

Click here to download ENSIPUG00000015364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015364	ptrh1	70	56.742	ENSG00000187024	PTRH1	83	56.742	Homo_sapiens
ENSIPUG00000015364	ptrh1	96	60.643	ENSAPOG00000000947	PTRH1	93	57.519	Acanthochromis_polyacanthus
ENSIPUG00000015364	ptrh1	96	60.643	ENSAPOG00000010719	ptrh1	93	57.519	Acanthochromis_polyacanthus
ENSIPUG00000015364	ptrh1	96	60.643	ENSAPOG00000003014	-	93	57.519	Acanthochromis_polyacanthus
ENSIPUG00000015364	ptrh1	73	53.514	ENSAMEG00000016791	PTRH1	88	53.514	Ailuropoda_melanoleuca
ENSIPUG00000015364	ptrh1	76	69.388	ENSACIG00000006734	ptrh1	84	69.388	Amphilophus_citrinellus
ENSIPUG00000015364	ptrh1	92	62.025	ENSAOCG00000009725	ptrh1	92	58.779	Amphiprion_ocellaris
ENSIPUG00000015364	ptrh1	92	62.025	ENSAPEG00000020993	ptrh1	92	58.779	Amphiprion_percula
ENSIPUG00000015364	ptrh1	93	65.289	ENSATEG00000010003	ptrh1	92	62.308	Anabas_testudineus
ENSIPUG00000015364	ptrh1	70	57.865	ENSANAG00000025547	PTRH1	83	57.865	Aotus_nancymaae
ENSIPUG00000015364	ptrh1	94	61.789	ENSACLG00000025462	ptrh1	96	61.789	Astatotilapia_calliptera
ENSIPUG00000015364	ptrh1	96	75.610	ENSAMXG00000034117	ptrh1	96	72.797	Astyanax_mexicanus
ENSIPUG00000015364	ptrh1	69	57.714	ENSCJAG00000019841	PTRH1	69	55.200	Callithrix_jacchus
ENSIPUG00000015364	ptrh1	70	56.983	ENSCAFG00000020123	PTRH1	83	56.983	Canis_familiaris
ENSIPUG00000015364	ptrh1	70	57.303	ENSCAFG00020015776	PTRH1	80	57.303	Canis_lupus_dingo
ENSIPUG00000015364	ptrh1	70	57.303	ENSCHIG00000008188	PTRH1	83	57.303	Capra_hircus
ENSIPUG00000015364	ptrh1	51	60.000	ENSCAPG00000015926	PTRH1	94	60.000	Cavia_aperea
ENSIPUG00000015364	ptrh1	73	54.839	ENSCPOG00000023968	PTRH1	87	54.839	Cavia_porcellus
ENSIPUG00000015364	ptrh1	70	57.303	ENSCCAG00000023134	PTRH1	83	57.303	Cebus_capucinus
ENSIPUG00000015364	ptrh1	70	56.742	ENSCATG00000042852	PTRH1	83	56.742	Cercocebus_atys
ENSIPUG00000015364	ptrh1	73	55.135	ENSCLAG00000011155	PTRH1	86	55.135	Chinchilla_lanigera
ENSIPUG00000015364	ptrh1	70	56.742	ENSCSAG00000013748	PTRH1	78	56.742	Chlorocebus_sabaeus
ENSIPUG00000015364	ptrh1	62	55.414	ENSCPBG00000025207	PTRH1	90	55.414	Chrysemys_picta_bellii
ENSIPUG00000015364	ptrh1	70	56.742	ENSCANG00000039856	PTRH1	83	56.742	Colobus_angolensis_palliatus
ENSIPUG00000015364	ptrh1	71	57.143	ENSCGRG00001013108	Ptrh1	89	57.143	Cricetulus_griseus_chok1gshd
ENSIPUG00000015364	ptrh1	67	59.649	ENSCGRG00000016553	Ptrh1	94	59.649	Cricetulus_griseus_crigri
ENSIPUG00000015364	ptrh1	93	58.130	ENSCSEG00000010332	ptrh1	93	56.154	Cynoglossus_semilaevis
ENSIPUG00000015364	ptrh1	96	59.109	ENSCVAG00000010701	ptrh1	94	56.705	Cyprinodon_variegatus
ENSIPUG00000015364	ptrh1	96	64.228	ENSDARG00000098206	ptrh1	97	65.639	Danio_rerio
ENSIPUG00000015364	ptrh1	69	58.286	ENSDNOG00000024194	PTRH1	82	58.286	Dasypus_novemcinctus
ENSIPUG00000015364	ptrh1	69	58.523	ENSDORG00000013321	Ptrh1	82	58.523	Dipodomys_ordii
ENSIPUG00000015364	ptrh1	70	58.427	ENSEASG00005020466	PTRH1	83	58.427	Equus_asinus_asinus
ENSIPUG00000015364	ptrh1	69	59.429	ENSECAG00000007615	PTRH1	64	59.429	Equus_caballus
ENSIPUG00000015364	ptrh1	92	61.506	ENSELUG00000015467	ptrh1	94	60.000	Esox_lucius
ENSIPUG00000015364	ptrh1	70	57.303	ENSFCAG00000001483	PTRH1	84	57.303	Felis_catus
ENSIPUG00000015364	ptrh1	67	52.047	ENSFALG00000001352	PTRH1	81	52.047	Ficedula_albicollis
ENSIPUG00000015364	ptrh1	73	56.989	ENSFDAG00000020077	PTRH1	91	56.989	Fukomys_damarensis
ENSIPUG00000015364	ptrh1	86	65.909	ENSFHEG00000010590	ptrh1	95	61.905	Fundulus_heteroclitus
ENSIPUG00000015364	ptrh1	57	58.389	ENSGMOG00000009801	PTRH1	100	58.389	Gadus_morhua
ENSIPUG00000015364	ptrh1	94	61.983	ENSGAFG00000016215	ptrh1	94	60.714	Gambusia_affinis
ENSIPUG00000015364	ptrh1	80	67.647	ENSGACG00000014682	ptrh1	97	70.430	Gasterosteus_aculeatus
ENSIPUG00000015364	ptrh1	85	50.679	ENSGAGG00000022860	PTRH1	96	50.679	Gopherus_agassizii
ENSIPUG00000015364	ptrh1	70	56.180	ENSGGOG00000011033	PTRH1	83	56.180	Gorilla_gorilla
ENSIPUG00000015364	ptrh1	95	61.044	ENSHBUG00000020824	ptrh1	98	56.679	Haplochromis_burtoni
ENSIPUG00000015364	ptrh1	79	53.960	ENSHGLG00000019147	PTRH1	98	53.960	Heterocephalus_glaber_female
ENSIPUG00000015364	ptrh1	73	52.432	ENSHGLG00100003681	PTRH1	93	52.432	Heterocephalus_glaber_male
ENSIPUG00000015364	ptrh1	84	64.516	ENSHCOG00000014772	ptrh1	81	64.220	Hippocampus_comes
ENSIPUG00000015364	ptrh1	63	60.000	ENSSTOG00000008942	PTRH1	86	54.891	Ictidomys_tridecemlineatus
ENSIPUG00000015364	ptrh1	69	58.286	ENSJJAG00000014338	Ptrh1	85	58.286	Jaculus_jaculus
ENSIPUG00000015364	ptrh1	95	61.475	ENSKMAG00000003253	ptrh1	87	61.475	Kryptolebias_marmoratus
ENSIPUG00000015364	ptrh1	69	63.277	ENSLACG00000016741	PTRH1	73	63.277	Latimeria_chalumnae
ENSIPUG00000015364	ptrh1	70	52.514	ENSLAFG00000021934	PTRH1	88	52.514	Loxodonta_africana
ENSIPUG00000015364	ptrh1	70	56.742	ENSMFAG00000001700	PTRH1	83	56.742	Macaca_fascicularis
ENSIPUG00000015364	ptrh1	70	56.742	ENSMMUG00000016424	PTRH1	83	56.742	Macaca_mulatta
ENSIPUG00000015364	ptrh1	70	56.742	ENSMNEG00000033061	PTRH1	78	56.742	Macaca_nemestrina
ENSIPUG00000015364	ptrh1	81	67.476	ENSMAMG00000017386	ptrh1	93	61.569	Mastacembelus_armatus
ENSIPUG00000015364	ptrh1	92	62.241	ENSMZEG00005020001	ptrh1	94	62.241	Maylandia_zebra
ENSIPUG00000015364	ptrh1	71	58.242	ENSMAUG00000006266	Ptrh1	89	58.242	Mesocricetus_auratus
ENSIPUG00000015364	ptrh1	70	57.303	ENSMICG00000005611	PTRH1	82	57.303	Microcebus_murinus
ENSIPUG00000015364	ptrh1	69	59.429	ENSMOCG00000013992	Ptrh1	86	59.429	Microtus_ochrogaster
ENSIPUG00000015364	ptrh1	98	60.156	ENSMMOG00000014747	ptrh1	99	57.692	Mola_mola
ENSIPUG00000015364	ptrh1	71	55.556	ENSMODG00000005503	PTRH1	83	55.556	Monodelphis_domestica
ENSIPUG00000015364	ptrh1	60	65.161	ENSMALG00000005392	ptrh1	91	65.161	Monopterus_albus
ENSIPUG00000015364	ptrh1	69	60.000	MGP_CAROLIEiJ_G0023450	Ptrh1	86	60.000	Mus_caroli
ENSIPUG00000015364	ptrh1	69	60.000	ENSMUSG00000053746	Ptrh1	86	60.000	Mus_musculus
ENSIPUG00000015364	ptrh1	69	60.000	MGP_PahariEiJ_G0024907	Ptrh1	86	60.000	Mus_pahari
ENSIPUG00000015364	ptrh1	69	59.429	MGP_SPRETEiJ_G0024367	Ptrh1	86	59.429	Mus_spretus
ENSIPUG00000015364	ptrh1	73	54.545	ENSMPUG00000013790	PTRH1	87	54.545	Mustela_putorius_furo
ENSIPUG00000015364	ptrh1	70	53.439	ENSMLUG00000013454	PTRH1	86	53.439	Myotis_lucifugus
ENSIPUG00000015364	ptrh1	69	57.143	ENSNGAG00000014008	Ptrh1	86	57.143	Nannospalax_galili
ENSIPUG00000015364	ptrh1	93	62.295	ENSNBRG00000015590	ptrh1	96	57.721	Neolamprologus_brichardi
ENSIPUG00000015364	ptrh1	70	56.180	ENSNLEG00000017468	PTRH1	83	56.180	Nomascus_leucogenys
ENSIPUG00000015364	ptrh1	72	57.065	ENSODEG00000004012	PTRH1	88	56.757	Octodon_degus
ENSIPUG00000015364	ptrh1	93	60.905	ENSONIG00000013912	ptrh1	94	62.151	Oreochromis_niloticus
ENSIPUG00000015364	ptrh1	71	55.978	ENSOANG00000011891	PTRH1	98	50.446	Ornithorhynchus_anatinus
ENSIPUG00000015364	ptrh1	70	56.742	ENSOCUG00000006894	PTRH1	77	56.742	Oryctolagus_cuniculus
ENSIPUG00000015364	ptrh1	73	56.989	ENSOGAG00000008094	PTRH1	89	56.989	Otolemur_garnettii
ENSIPUG00000015364	ptrh1	70	52.381	ENSOARG00000011808	PTRH1	84	52.381	Ovis_aries
ENSIPUG00000015364	ptrh1	70	56.742	ENSPPAG00000041782	PTRH1	83	56.742	Pan_paniscus
ENSIPUG00000015364	ptrh1	70	57.303	ENSPPRG00000007889	PTRH1	84	57.303	Panthera_pardus
ENSIPUG00000015364	ptrh1	70	56.742	ENSPTRG00000021394	PTRH1	83	56.742	Pan_troglodytes
ENSIPUG00000015364	ptrh1	70	46.961	ENSPANG00000031755	PTRH1	83	46.961	Papio_anubis
ENSIPUG00000015364	ptrh1	94	56.107	ENSPKIG00000005449	ptrh1	85	56.107	Paramormyrops_kingsleyae
ENSIPUG00000015364	ptrh1	80	52.913	ENSPSIG00000013828	PTRH1	75	52.913	Pelodiscus_sinensis
ENSIPUG00000015364	ptrh1	81	58.654	ENSPMGG00000002148	ptrh1	86	53.543	Periophthalmus_magnuspinnatus
ENSIPUG00000015364	ptrh1	63	62.733	ENSPEMG00000014360	Ptrh1	86	60.571	Peromyscus_maniculatus_bairdii
ENSIPUG00000015364	ptrh1	92	63.713	ENSPFOG00000003715	ptrh1	94	61.600	Poecilia_formosa
ENSIPUG00000015364	ptrh1	92	62.025	ENSPLAG00000023354	ptrh1	93	60.000	Poecilia_latipinna
ENSIPUG00000015364	ptrh1	92	63.713	ENSPMEG00000000447	ptrh1	94	61.600	Poecilia_mexicana
ENSIPUG00000015364	ptrh1	92	62.869	ENSPREG00000012612	ptrh1	94	60.800	Poecilia_reticulata
ENSIPUG00000015364	ptrh1	70	52.809	ENSPPYG00000019628	PTRH1	77	52.809	Pongo_abelii
ENSIPUG00000015364	ptrh1	70	57.303	ENSPCAG00000007016	PTRH1	83	57.303	Procavia_capensis
ENSIPUG00000015364	ptrh1	70	57.303	ENSPCOG00000014541	PTRH1	82	57.303	Propithecus_coquereli
ENSIPUG00000015364	ptrh1	70	57.865	ENSPVAG00000000954	PTRH1	83	57.865	Pteropus_vampyrus
ENSIPUG00000015364	ptrh1	96	61.111	ENSPNYG00000007789	ptrh1	92	59.245	Pundamilia_nyererei
ENSIPUG00000015364	ptrh1	96	74.286	ENSPNAG00000029930	ptrh1	95	71.429	Pygocentrus_nattereri
ENSIPUG00000015364	ptrh1	69	61.143	ENSRNOG00000049034	Ptrh1	86	61.143	Rattus_norvegicus
ENSIPUG00000015364	ptrh1	70	56.742	ENSRBIG00000027290	PTRH1	83	56.742	Rhinopithecus_bieti
ENSIPUG00000015364	ptrh1	70	56.742	ENSRROG00000028799	PTRH1	78	56.742	Rhinopithecus_roxellana
ENSIPUG00000015364	ptrh1	64	30.460	YHR189W	PTH1	92	30.460	Saccharomyces_cerevisiae
ENSIPUG00000015364	ptrh1	70	56.742	ENSSBOG00000026699	PTRH1	78	56.742	Saimiri_boliviensis_boliviensis
ENSIPUG00000015364	ptrh1	72	55.319	ENSSHAG00000018238	PTRH1	92	55.319	Sarcophilus_harrisii
ENSIPUG00000015364	ptrh1	81	61.836	ENSSFOG00015007053	ptrh1	87	67.614	Scleropages_formosus
ENSIPUG00000015364	ptrh1	75	66.000	ENSSMAG00000016747	ptrh1	85	66.000	Scophthalmus_maximus
ENSIPUG00000015364	ptrh1	93	61.925	ENSSDUG00000013471	ptrh1	96	62.762	Seriola_dumerili
ENSIPUG00000015364	ptrh1	80	62.679	ENSSLDG00000024662	ptrh1	92	63.636	Seriola_lalandi_dorsalis
ENSIPUG00000015364	ptrh1	82	51.675	ENSSPUG00000000040	PTRH1	86	51.675	Sphenodon_punctatus
ENSIPUG00000015364	ptrh1	91	62.393	ENSSPAG00000003298	ptrh1	90	67.778	Stegastes_partitus
ENSIPUG00000015364	ptrh1	70	57.865	ENSSSCG00000005615	PTRH1	83	57.865	Sus_scrofa
ENSIPUG00000015364	ptrh1	53	56.716	ENSTGUG00000003648	PTRH1	100	56.716	Taeniopygia_guttata
ENSIPUG00000015364	ptrh1	91	62.288	ENSTRUG00000019801	PTRH1	96	59.848	Takifugu_rubripes
ENSIPUG00000015364	ptrh1	82	64.623	ENSTNIG00000016735	ptrh1	94	64.623	Tetraodon_nigroviridis
ENSIPUG00000015364	ptrh1	70	53.933	ENSTTRG00000016458	PTRH1	83	53.933	Tursiops_truncatus
ENSIPUG00000015364	ptrh1	70	57.865	ENSUAMG00000023948	-	80	57.865	Ursus_americanus
ENSIPUG00000015364	ptrh1	69	45.714	ENSVPAG00000001805	PTRH1	96	45.714	Vicugna_pacos
ENSIPUG00000015364	ptrh1	70	57.303	ENSVVUG00000013198	PTRH1	80	57.303	Vulpes_vulpes
ENSIPUG00000015364	ptrh1	68	56.322	ENSXETG00000009980	ptrh1	93	56.322	Xenopus_tropicalis
ENSIPUG00000015364	ptrh1	81	65.865	ENSXCOG00000011498	ptrh1	89	65.865	Xiphophorus_couchianus
ENSIPUG00000015364	ptrh1	93	62.762	ENSXMAG00000009256	ptrh1	94	60.714	Xiphophorus_maculatus