EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000015395 (Gene tree)
Gene ID: 108280046
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 12597 bases
Position: chr19:2590050-2602646
Accession: 108280046
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000022705	MRP-S32	PF10210.9	4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000023680	-	787	XM_017494794	ENSIPUP00000022705	147 (aa)	XP_017350283	A0A2D0T5W7

Gene Model

Click here to download ENSIPUG00000015395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015395's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015395	mrpl42	69	59.804	ENSAPOG00000010677	mrpl42	71	59.804	Acanthochromis_polyacanthus
ENSIPUG00000015395	mrpl42	69	62.376	ENSAOCG00000011620	mrpl42	71	62.376	Amphiprion_ocellaris
ENSIPUG00000015395	mrpl42	69	62.376	ENSAPEG00000019516	mrpl42	71	62.376	Amphiprion_percula
ENSIPUG00000015395	mrpl42	82	50.000	ENSATEG00000014106	mrpl42	92	50.000	Anabas_testudineus
ENSIPUG00000015395	mrpl42	69	62.376	ENSACAG00000012606	MRPL42	69	62.376	Anolis_carolinensis
ENSIPUG00000015395	mrpl42	84	52.419	ENSACLG00000026856	mrpl42	83	52.419	Astatotilapia_calliptera
ENSIPUG00000015395	mrpl42	100	47.297	ENSAMXG00000035149	mrpl42	100	47.297	Astyanax_mexicanus
ENSIPUG00000015395	mrpl42	66	57.732	ENSCSEG00000010067	mrpl42	69	57.732	Cynoglossus_semilaevis
ENSIPUG00000015395	mrpl42	92	53.623	ENSCVAG00000002612	mrpl42	92	53.623	Cyprinodon_variegatus
ENSIPUG00000015395	mrpl42	80	52.941	ENSDARG00000079391	mrpl42	83	52.941	Danio_rerio
ENSIPUG00000015395	mrpl42	80	41.129	ENSEBUG00000005581	mrpl42	92	41.129	Eptatretus_burgeri
ENSIPUG00000015395	mrpl42	100	50.340	ENSELUG00000001973	mrpl42	100	50.340	Esox_lucius
ENSIPUG00000015395	mrpl42	92	52.593	ENSFHEG00000018696	mrpl42	90	52.593	Fundulus_heteroclitus
ENSIPUG00000015395	mrpl42	65	59.375	ENSGMOG00000002972	mrpl42	99	59.375	Gadus_morhua
ENSIPUG00000015395	mrpl42	91	51.493	ENSGAFG00000018373	mrpl42	90	51.493	Gambusia_affinis
ENSIPUG00000015395	mrpl42	66	58.763	ENSGACG00000018811	mrpl42	100	58.763	Gasterosteus_aculeatus
ENSIPUG00000015395	mrpl42	84	52.419	ENSHBUG00000015960	mrpl42	83	52.419	Haplochromis_burtoni
ENSIPUG00000015395	mrpl42	84	51.613	ENSHCOG00000014046	mrpl42	83	51.613	Hippocampus_comes
ENSIPUG00000015395	mrpl42	65	58.333	ENSKMAG00000013671	mrpl42	67	58.333	Kryptolebias_marmoratus
ENSIPUG00000015395	mrpl42	67	63.636	ENSLBEG00000028618	mrpl42	67	63.636	Labrus_bergylta
ENSIPUG00000015395	mrpl42	100	48.322	ENSMAMG00000009737	mrpl42	100	48.322	Mastacembelus_armatus
ENSIPUG00000015395	mrpl42	84	52.419	ENSMZEG00005008545	mrpl42	79	52.419	Maylandia_zebra
ENSIPUG00000015395	mrpl42	56	57.831	ENSMMOG00000002317	mrpl42	55	57.831	Mola_mola
ENSIPUG00000015395	mrpl42	67	58.586	ENSMALG00000015794	mrpl42	61	58.586	Monopterus_albus
ENSIPUG00000015395	mrpl42	84	52.419	ENSNBRG00000003307	mrpl42	83	52.419	Neolamprologus_brichardi
ENSIPUG00000015395	mrpl42	84	52.419	ENSONIG00000011753	mrpl42	83	52.419	Oreochromis_niloticus
ENSIPUG00000015395	mrpl42	67	55.556	ENSOANG00000019984	-	67	55.556	Ornithorhynchus_anatinus
ENSIPUG00000015395	mrpl42	96	48.227	ENSORLG00000013500	mrpl42	58	59.596	Oryzias_latipes
ENSIPUG00000015395	mrpl42	67	59.596	ENSORLG00020000548	mrpl42	68	59.596	Oryzias_latipes_hni
ENSIPUG00000015395	mrpl42	92	48.905	ENSORLG00015016984	mrpl42	79	48.905	Oryzias_latipes_hsok
ENSIPUG00000015395	mrpl42	76	57.143	ENSOMEG00000010700	mrpl42	77	57.143	Oryzias_melastigma
ENSIPUG00000015395	mrpl42	69	58.416	ENSPKIG00000025457	mrpl42	69	58.416	Paramormyrops_kingsleyae
ENSIPUG00000015395	mrpl42	86	51.145	ENSPMGG00000019705	mrpl42	91	51.145	Periophthalmus_magnuspinnatus
ENSIPUG00000015395	mrpl42	76	49.565	ENSPMAG00000008091	mrpl42	74	49.565	Petromyzon_marinus
ENSIPUG00000015395	mrpl42	67	59.596	ENSPFOG00000016539	mrpl42	67	59.596	Poecilia_formosa
ENSIPUG00000015395	mrpl42	67	60.606	ENSPLAG00000001255	mrpl42	68	60.606	Poecilia_latipinna
ENSIPUG00000015395	mrpl42	70	58.252	ENSPMEG00000016462	mrpl42	68	59.596	Poecilia_mexicana
ENSIPUG00000015395	mrpl42	67	55.556	ENSPREG00000012053	mrpl42	72	55.556	Poecilia_reticulata
ENSIPUG00000015395	mrpl42	84	52.419	ENSPNYG00000009586	mrpl42	83	52.419	Pundamilia_nyererei
ENSIPUG00000015395	mrpl42	100	58.503	ENSPNAG00000020753	mrpl42	100	58.503	Pygocentrus_nattereri
ENSIPUG00000015395	mrpl42	92	51.449	ENSSMAG00000000262	mrpl42	92	51.449	Scophthalmus_maximus
ENSIPUG00000015395	mrpl42	67	57.576	ENSSDUG00000005949	mrpl42	68	57.576	Seriola_dumerili
ENSIPUG00000015395	mrpl42	92	48.921	ENSSLDG00000010159	mrpl42	92	48.921	Seriola_lalandi_dorsalis
ENSIPUG00000015395	mrpl42	89	48.148	ENSTRUG00000025949	mrpl42	90	48.148	Takifugu_rubripes
ENSIPUG00000015395	mrpl42	77	50.442	ENSXETG00000032902	mrpl42	90	50.442	Xenopus_tropicalis
ENSIPUG00000015395	mrpl42	66	59.794	ENSXCOG00000013875	mrpl42	75	59.794	Xiphophorus_couchianus