EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000015397 (Gene tree)
Gene ID: 100528171
Gene Symbol: exosc2
Alias: exos2
Full Name: exosome component 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 4967 bases
Position: chr28:13259140-13264106
Accession: 100528171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000022800	ECR1_N	PF14382.6	9.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000023775	-	1574	-	ENSIPUP00000022800	294 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000015397's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015397's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015397	exosc2	100	77.891	ENSG00000130713	EXOSC2	100	77.891	Homo_sapiens
ENSIPUG00000015397	exosc2	90	86.415	ENSAPOG00000008861	exosc2	97	86.415	Acanthochromis_polyacanthus
ENSIPUG00000015397	exosc2	100	77.551	ENSAMEG00000016239	EXOSC2	100	77.551	Ailuropoda_melanoleuca
ENSIPUG00000015397	exosc2	100	85.714	ENSACIG00000019054	exosc2	100	85.714	Amphilophus_citrinellus
ENSIPUG00000015397	exosc2	100	84.694	ENSAOCG00000008577	exosc2	100	84.694	Amphiprion_ocellaris
ENSIPUG00000015397	exosc2	100	84.694	ENSAOCG00000004983	exosc2	100	84.694	Amphiprion_ocellaris
ENSIPUG00000015397	exosc2	100	84.694	ENSAPEG00000014088	exosc2	100	84.694	Amphiprion_percula
ENSIPUG00000015397	exosc2	100	85.374	ENSATEG00000018680	exosc2	100	85.374	Anabas_testudineus
ENSIPUG00000015397	exosc2	92	83.395	ENSAPLG00000012516	EXOSC2	93	83.395	Anas_platyrhynchos
ENSIPUG00000015397	exosc2	99	76.871	ENSACAG00000002706	EXOSC2	99	76.871	Anolis_carolinensis
ENSIPUG00000015397	exosc2	100	86.441	ENSACLG00000013613	exosc2	100	86.441	Astatotilapia_calliptera
ENSIPUG00000015397	exosc2	100	91.525	ENSAMXG00000042605	exosc2	100	91.525	Astyanax_mexicanus
ENSIPUG00000015397	exosc2	100	77.891	ENSBTAG00000048071	EXOSC2	100	77.891	Bos_taurus
ENSIPUG00000015397	exosc2	92	43.382	WBGene00022232	exos-2	90	43.382	Caenorhabditis_elegans
ENSIPUG00000015397	exosc2	100	77.891	ENSCJAG00000020537	EXOSC2	100	77.891	Callithrix_jacchus
ENSIPUG00000015397	exosc2	99	76.451	ENSCAFG00000019941	EXOSC2	99	76.451	Canis_familiaris
ENSIPUG00000015397	exosc2	100	76.531	ENSCAFG00020024047	EXOSC2	100	76.531	Canis_lupus_dingo
ENSIPUG00000015397	exosc2	100	78.231	ENSCHIG00000021398	EXOSC2	100	78.231	Capra_hircus
ENSIPUG00000015397	exosc2	100	77.551	ENSTSYG00000001805	EXOSC2	100	77.551	Carlito_syrichta
ENSIPUG00000015397	exosc2	100	73.737	ENSCPOG00000005902	EXOSC2	100	73.737	Cavia_porcellus
ENSIPUG00000015397	exosc2	100	77.891	ENSCCAG00000019749	EXOSC2	100	77.891	Cebus_capucinus
ENSIPUG00000015397	exosc2	100	78.231	ENSCATG00000025389	-	100	78.231	Cercocebus_atys
ENSIPUG00000015397	exosc2	100	77.891	ENSCLAG00000006195	EXOSC2	100	77.891	Chinchilla_lanigera
ENSIPUG00000015397	exosc2	100	78.231	ENSCSAG00000014760	EXOSC2	100	78.231	Chlorocebus_sabaeus
ENSIPUG00000015397	exosc2	100	76.531	ENSCHOG00000000858	EXOSC2	100	76.531	Choloepus_hoffmanni
ENSIPUG00000015397	exosc2	99	78.157	ENSCPBG00000022626	EXOSC2	99	78.157	Chrysemys_picta_bellii
ENSIPUG00000015397	exosc2	96	63.889	ENSCING00000014934	-	94	63.889	Ciona_intestinalis
ENSIPUG00000015397	exosc2	93	62.816	ENSCSAVG00000003684	-	100	62.816	Ciona_savignyi
ENSIPUG00000015397	exosc2	100	78.231	ENSCANG00000039828	-	100	78.231	Colobus_angolensis_palliatus
ENSIPUG00000015397	exosc2	99	70.990	ENSCANG00000029298	-	99	70.990	Colobus_angolensis_palliatus
ENSIPUG00000015397	exosc2	100	78.231	ENSCGRG00001013981	Exosc2	100	78.231	Cricetulus_griseus_chok1gshd
ENSIPUG00000015397	exosc2	100	78.231	ENSCGRG00000017629	Exosc2	100	78.231	Cricetulus_griseus_crigri
ENSIPUG00000015397	exosc2	100	83.673	ENSCSEG00000016539	exosc2	100	83.673	Cynoglossus_semilaevis
ENSIPUG00000015397	exosc2	100	84.694	ENSCVAG00000022260	exosc2	100	84.694	Cyprinodon_variegatus
ENSIPUG00000015397	exosc2	100	82.034	ENSDARG00000028688	exosc2	100	82.034	Danio_rerio
ENSIPUG00000015397	exosc2	91	76.493	ENSDNOG00000025767	-	100	76.493	Dasypus_novemcinctus
ENSIPUG00000015397	exosc2	100	77.891	ENSDORG00000009238	Exosc2	100	77.891	Dipodomys_ordii
ENSIPUG00000015397	exosc2	89	62.879	FBgn0034879	Rrp4	89	63.636	Drosophila_melanogaster
ENSIPUG00000015397	exosc2	92	67.407	ENSETEG00000016130	-	97	67.407	Echinops_telfairi
ENSIPUG00000015397	exosc2	100	77.551	ENSEASG00005008475	EXOSC2	86	77.551	Equus_asinus_asinus
ENSIPUG00000015397	exosc2	100	77.551	ENSECAG00000007897	EXOSC2	86	77.551	Equus_caballus
ENSIPUG00000015397	exosc2	100	88.814	ENSELUG00000013641	exosc2	100	88.814	Esox_lucius
ENSIPUG00000015397	exosc2	100	77.891	ENSFCAG00000025936	EXOSC2	100	77.891	Felis_catus
ENSIPUG00000015397	exosc2	95	78.397	ENSFALG00000001446	EXOSC2	98	78.397	Ficedula_albicollis
ENSIPUG00000015397	exosc2	100	76.190	ENSFDAG00000017196	EXOSC2	100	76.190	Fukomys_damarensis
ENSIPUG00000015397	exosc2	100	85.714	ENSFHEG00000018571	exosc2	100	85.714	Fundulus_heteroclitus
ENSIPUG00000015397	exosc2	100	79.932	ENSGMOG00000011785	exosc2	99	79.932	Gadus_morhua
ENSIPUG00000015397	exosc2	99	80.205	ENSGALG00000040373	EXOSC2	99	80.205	Gallus_gallus
ENSIPUG00000015397	exosc2	99	86.007	ENSGAFG00000010283	exosc2	99	86.007	Gambusia_affinis
ENSIPUG00000015397	exosc2	100	82.993	ENSGACG00000016805	exosc2	99	84.118	Gasterosteus_aculeatus
ENSIPUG00000015397	exosc2	89	81.439	ENSGAGG00000021026	EXOSC2	99	81.439	Gopherus_agassizii
ENSIPUG00000015397	exosc2	100	77.211	ENSGGOG00000010578	EXOSC2	100	77.211	Gorilla_gorilla
ENSIPUG00000015397	exosc2	100	86.780	ENSHBUG00000022437	exosc2	100	86.780	Haplochromis_burtoni
ENSIPUG00000015397	exosc2	100	76.871	ENSHGLG00000012834	EXOSC2	100	76.871	Heterocephalus_glaber_female
ENSIPUG00000015397	exosc2	100	76.871	ENSHGLG00100007092	EXOSC2	100	76.871	Heterocephalus_glaber_male
ENSIPUG00000015397	exosc2	100	82.993	ENSHCOG00000019130	exosc2	100	82.993	Hippocampus_comes
ENSIPUG00000015397	exosc2	100	77.211	ENSSTOG00000005999	EXOSC2	100	77.211	Ictidomys_tridecemlineatus
ENSIPUG00000015397	exosc2	100	77.211	ENSJJAG00000003188	Exosc2	100	77.211	Jaculus_jaculus
ENSIPUG00000015397	exosc2	99	84.983	ENSKMAG00000017397	exosc2	99	84.983	Kryptolebias_marmoratus
ENSIPUG00000015397	exosc2	100	82.993	ENSLBEG00000019269	exosc2	100	82.993	Labrus_bergylta
ENSIPUG00000015397	exosc2	100	79.932	ENSLACG00000015530	EXOSC2	100	79.932	Latimeria_chalumnae
ENSIPUG00000015397	exosc2	100	77.288	ENSLAFG00000006984	EXOSC2	100	77.288	Loxodonta_africana
ENSIPUG00000015397	exosc2	100	78.231	ENSMFAG00000000597	-	100	78.231	Macaca_fascicularis
ENSIPUG00000015397	exosc2	100	67.007	ENSMFAG00000034160	-	84	67.007	Macaca_fascicularis
ENSIPUG00000015397	exosc2	100	75.170	ENSMMUG00000012498	EXOSC2	100	75.170	Macaca_mulatta
ENSIPUG00000015397	exosc2	100	67.687	ENSMNEG00000028704	-	91	67.687	Macaca_nemestrina
ENSIPUG00000015397	exosc2	100	78.231	ENSMNEG00000031861	-	100	78.231	Macaca_nemestrina
ENSIPUG00000015397	exosc2	100	78.231	ENSMLEG00000042587	-	100	78.231	Mandrillus_leucophaeus
ENSIPUG00000015397	exosc2	100	67.007	ENSMLEG00000029891	-	91	67.007	Mandrillus_leucophaeus
ENSIPUG00000015397	exosc2	100	84.694	ENSMAMG00000012466	exosc2	100	84.694	Mastacembelus_armatus
ENSIPUG00000015397	exosc2	100	85.763	ENSMZEG00005018737	exosc2	100	85.763	Maylandia_zebra
ENSIPUG00000015397	exosc2	99	80.205	ENSMGAG00000005450	EXOSC2	99	80.205	Meleagris_gallopavo
ENSIPUG00000015397	exosc2	100	78.231	ENSMAUG00000008299	Exosc2	100	78.231	Mesocricetus_auratus
ENSIPUG00000015397	exosc2	100	78.231	ENSMICG00000015495	EXOSC2	100	78.231	Microcebus_murinus
ENSIPUG00000015397	exosc2	100	77.891	ENSMOCG00000008262	Exosc2	100	77.891	Microtus_ochrogaster
ENSIPUG00000015397	exosc2	100	84.694	ENSMMOG00000009616	exosc2	100	84.694	Mola_mola
ENSIPUG00000015397	exosc2	100	79.592	ENSMODG00000012114	EXOSC2	100	79.592	Monodelphis_domestica
ENSIPUG00000015397	exosc2	100	85.034	ENSMALG00000022132	exosc2	100	85.034	Monopterus_albus
ENSIPUG00000015397	exosc2	100	77.891	MGP_CAROLIEiJ_G0023415	Exosc2	100	77.891	Mus_caroli
ENSIPUG00000015397	exosc2	100	77.891	ENSMUSG00000039356	Exosc2	100	77.891	Mus_musculus
ENSIPUG00000015397	exosc2	100	78.231	MGP_PahariEiJ_G0024872	Exosc2	100	78.231	Mus_pahari
ENSIPUG00000015397	exosc2	100	77.891	MGP_SPRETEiJ_G0024332	Exosc2	100	77.891	Mus_spretus
ENSIPUG00000015397	exosc2	100	77.551	ENSMPUG00000012686	EXOSC2	100	77.551	Mustela_putorius_furo
ENSIPUG00000015397	exosc2	100	77.365	ENSMLUG00000008776	EXOSC2	100	77.365	Myotis_lucifugus
ENSIPUG00000015397	exosc2	100	77.891	ENSNGAG00000019383	Exosc2	100	77.891	Nannospalax_galili
ENSIPUG00000015397	exosc2	100	86.102	ENSNBRG00000005453	exosc2	100	86.102	Neolamprologus_brichardi
ENSIPUG00000015397	exosc2	100	77.891	ENSNLEG00000012533	EXOSC2	100	77.891	Nomascus_leucogenys
ENSIPUG00000015397	exosc2	100	61.905	ENSMEUG00000000795	EXOSC2	100	61.905	Notamacropus_eugenii
ENSIPUG00000015397	exosc2	65	88.462	ENSOPRG00000008688	EXOSC2	65	88.462	Ochotona_princeps
ENSIPUG00000015397	exosc2	100	77.211	ENSODEG00000016880	-	100	77.211	Octodon_degus
ENSIPUG00000015397	exosc2	86	80.709	ENSODEG00000019513	-	100	80.709	Octodon_degus
ENSIPUG00000015397	exosc2	100	86.441	ENSONIG00000014086	exosc2	100	86.441	Oreochromis_niloticus
ENSIPUG00000015397	exosc2	100	75.758	ENSOANG00000001044	EXOSC2	100	75.758	Ornithorhynchus_anatinus
ENSIPUG00000015397	exosc2	100	79.392	ENSOCUG00000007138	EXOSC2	100	79.392	Oryctolagus_cuniculus
ENSIPUG00000015397	exosc2	100	85.085	ENSORLG00000007443	exosc2	100	85.085	Oryzias_latipes
ENSIPUG00000015397	exosc2	100	85.085	ENSORLG00020018902	exosc2	100	85.085	Oryzias_latipes_hni
ENSIPUG00000015397	exosc2	100	85.424	ENSORLG00015006767	exosc2	100	85.424	Oryzias_latipes_hsok
ENSIPUG00000015397	exosc2	100	83.673	ENSOMEG00000003533	exosc2	100	83.673	Oryzias_melastigma
ENSIPUG00000015397	exosc2	100	77.891	ENSOGAG00000007558	EXOSC2	100	77.891	Otolemur_garnettii
ENSIPUG00000015397	exosc2	100	77.365	ENSOARG00000007438	EXOSC2	100	77.365	Ovis_aries
ENSIPUG00000015397	exosc2	100	77.891	ENSPPAG00000034796	EXOSC2	100	77.891	Pan_paniscus
ENSIPUG00000015397	exosc2	100	77.551	ENSPPRG00000001089	EXOSC2	100	77.551	Panthera_pardus
ENSIPUG00000015397	exosc2	100	77.551	ENSPTIG00000021163	EXOSC2	100	77.551	Panthera_tigris_altaica
ENSIPUG00000015397	exosc2	100	77.891	ENSPTRG00000045766	-	100	77.891	Pan_troglodytes
ENSIPUG00000015397	exosc2	100	77.891	ENSPTRG00000021476	EXOSC2	100	77.891	Pan_troglodytes
ENSIPUG00000015397	exosc2	100	78.231	ENSPANG00000025966	EXOSC2	100	78.231	Papio_anubis
ENSIPUG00000015397	exosc2	99	84.880	ENSPKIG00000004271	exosc2	98	84.880	Paramormyrops_kingsleyae
ENSIPUG00000015397	exosc2	99	79.181	ENSPSIG00000006743	EXOSC2	99	79.181	Pelodiscus_sinensis
ENSIPUG00000015397	exosc2	86	86.561	ENSPMGG00000010980	exosc2	99	86.561	Periophthalmus_magnuspinnatus
ENSIPUG00000015397	exosc2	100	77.891	ENSPEMG00000006345	Exosc2	100	77.891	Peromyscus_maniculatus_bairdii
ENSIPUG00000015397	exosc2	100	76.271	ENSPMAG00000001280	exosc2	100	76.271	Petromyzon_marinus
ENSIPUG00000015397	exosc2	100	79.252	ENSPCIG00000024122	EXOSC2	97	79.252	Phascolarctos_cinereus
ENSIPUG00000015397	exosc2	99	85.714	ENSPFOG00000019819	exosc2	99	85.714	Poecilia_formosa
ENSIPUG00000015397	exosc2	99	86.007	ENSPLAG00000004605	exosc2	99	86.007	Poecilia_latipinna
ENSIPUG00000015397	exosc2	99	86.007	ENSPMEG00000010976	exosc2	99	86.007	Poecilia_mexicana
ENSIPUG00000015397	exosc2	99	85.666	ENSPREG00000014306	exosc2	99	85.666	Poecilia_reticulata
ENSIPUG00000015397	exosc2	100	78.231	ENSPPYG00000019695	EXOSC2	100	78.231	Pongo_abelii
ENSIPUG00000015397	exosc2	100	78.231	ENSPCAG00000013400	EXOSC2	100	78.231	Procavia_capensis
ENSIPUG00000015397	exosc2	100	78.231	ENSPCOG00000017639	EXOSC2	100	78.231	Propithecus_coquereli
ENSIPUG00000015397	exosc2	100	76.531	ENSPVAG00000001513	EXOSC2	100	76.531	Pteropus_vampyrus
ENSIPUG00000015397	exosc2	100	86.780	ENSPNYG00000007383	exosc2	100	86.780	Pundamilia_nyererei
ENSIPUG00000015397	exosc2	100	91.525	ENSPNAG00000014281	exosc2	100	91.525	Pygocentrus_nattereri
ENSIPUG00000015397	exosc2	100	77.551	ENSRNOG00000009245	Exosc2	100	77.551	Rattus_norvegicus
ENSIPUG00000015397	exosc2	99	70.990	ENSRBIG00000029791	-	99	70.990	Rhinopithecus_bieti
ENSIPUG00000015397	exosc2	100	78.231	ENSRBIG00000031203	-	100	78.231	Rhinopithecus_bieti
ENSIPUG00000015397	exosc2	100	78.231	ENSRROG00000010827	-	100	78.231	Rhinopithecus_roxellana
ENSIPUG00000015397	exosc2	99	69.966	ENSRROG00000043609	-	99	69.966	Rhinopithecus_roxellana
ENSIPUG00000015397	exosc2	90	42.193	YHR069C	-	84	42.193	Saccharomyces_cerevisiae
ENSIPUG00000015397	exosc2	100	77.551	ENSSBOG00000022712	EXOSC2	100	77.551	Saimiri_boliviensis_boliviensis
ENSIPUG00000015397	exosc2	100	79.592	ENSSHAG00000016050	EXOSC2	100	79.592	Sarcophilus_harrisii
ENSIPUG00000015397	exosc2	100	86.780	ENSSFOG00015011245	exosc2	100	86.780	Scleropages_formosus
ENSIPUG00000015397	exosc2	100	85.085	ENSSMAG00000003112	exosc2	100	85.085	Scophthalmus_maximus
ENSIPUG00000015397	exosc2	100	84.512	ENSSDUG00000004634	exosc2	100	84.512	Seriola_dumerili
ENSIPUG00000015397	exosc2	100	85.374	ENSSLDG00000010616	exosc2	100	85.374	Seriola_lalandi_dorsalis
ENSIPUG00000015397	exosc2	99	77.966	ENSSPUG00000013391	EXOSC2	99	77.966	Sphenodon_punctatus
ENSIPUG00000015397	exosc2	100	84.694	ENSSPAG00000022947	exosc2	100	84.694	Stegastes_partitus
ENSIPUG00000015397	exosc2	100	78.231	ENSSSCG00000005704	EXOSC2	100	78.231	Sus_scrofa
ENSIPUG00000015397	exosc2	99	77.288	ENSTGUG00000004697	EXOSC2	99	77.288	Taeniopygia_guttata
ENSIPUG00000015397	exosc2	100	77.211	ENSTRUG00000022436	exosc2	100	77.211	Takifugu_rubripes
ENSIPUG00000015397	exosc2	100	73.469	ENSTTRG00000015159	EXOSC2	100	73.469	Tursiops_truncatus
ENSIPUG00000015397	exosc2	94	75.090	ENSUAMG00000009651	EXOSC2	98	75.090	Ursus_americanus
ENSIPUG00000015397	exosc2	100	77.551	ENSUMAG00000018726	EXOSC2	100	77.551	Ursus_maritimus
ENSIPUG00000015397	exosc2	100	76.531	ENSVVUG00000027665	EXOSC2	100	76.531	Vulpes_vulpes
ENSIPUG00000015397	exosc2	100	76.531	ENSXETG00000001340	exosc2	100	76.531	Xenopus_tropicalis
ENSIPUG00000015397	exosc2	99	85.324	ENSXMAG00000005265	exosc2	99	85.324	Xiphophorus_maculatus