EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000015431 (Gene tree)
Gene ID: 108259201
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 33826 bases
Position: chr2:4298331-4332156
Accession: 108259201
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000022798	zf-C2H2_jaz	PF12171.8	3.3e-06	1	1
ENSIPUP00000022782	zf-C2H2_jaz	PF12171.8	3.4e-06	1	1
ENSIPUP00000022767	zf-C2H2_jaz	PF12171.8	3.5e-06	1	1
ENSIPUP00000022782	G-patch	PF01585.23	4.7e-13	1	1
ENSIPUP00000022767	G-patch	PF01585.23	4.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000023774	-	4400	XM_017458455	ENSIPUP00000022798	1438 (aa)	XP_017313944	A0A2D0Q6M1
ENSIPUT00000023742	-	4910	XM_017458438	ENSIPUP00000022767	1517 (aa)	XP_017313927	A0A2D0Q6J7
ENSIPUT00000023758	-	4823	XM_017458447	ENSIPUP00000022782	1488 (aa)	XP_017313936	A0A2D0Q892

Gene Model

Click here to download ENSIPUG00000015431's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015431's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015431	gpatch8	55	60.023	ENSAPOG00000023938	gpatch8	59	61.304	Acanthochromis_polyacanthus
ENSIPUG00000015431	gpatch8	55	60.995	ENSAOCG00000018102	gpatch8	59	61.630	Amphiprion_ocellaris
ENSIPUG00000015431	gpatch8	55	61.060	ENSAPEG00000016776	gpatch8	59	61.339	Amphiprion_percula
ENSIPUG00000015431	gpatch8	55	61.450	ENSATEG00000003247	gpatch8	100	60.825	Anabas_testudineus
ENSIPUG00000015431	gpatch8	56	64.173	ENSAPLG00000003095	GPATCH8	54	64.831	Anas_platyrhynchos
ENSIPUG00000015431	gpatch8	55	61.234	ENSACLG00000004165	gpatch8	59	60.352	Astatotilapia_calliptera
ENSIPUG00000015431	gpatch8	100	75.394	ENSAMXG00000041683	gpatch8	100	77.001	Astyanax_mexicanus
ENSIPUG00000015431	gpatch8	55	58.986	ENSCSEG00000021277	gpatch8	100	61.578	Cynoglossus_semilaevis
ENSIPUG00000015431	gpatch8	55	59.207	ENSCVAG00000013477	gpatch8	59	59.935	Cyprinodon_variegatus
ENSIPUG00000015431	gpatch8	100	69.380	ENSDARG00000059768	gpatch8	60	67.495	Danio_rerio
ENSIPUG00000015431	gpatch8	59	46.217	ENSEBUG00000005749	gpatch8	54	45.910	Eptatretus_burgeri
ENSIPUG00000015431	gpatch8	55	58.025	ENSELUG00000019920	gpatch8	60	59.957	Esox_lucius
ENSIPUG00000015431	gpatch8	56	58.333	ENSFALG00000009554	GPATCH8	54	60.169	Ficedula_albicollis
ENSIPUG00000015431	gpatch8	55	60.981	ENSFHEG00000005791	gpatch8	59	61.105	Fundulus_heteroclitus
ENSIPUG00000015431	gpatch8	55	60.727	ENSGAFG00000018138	gpatch8	59	58.689	Gambusia_affinis
ENSIPUG00000015431	gpatch8	55	63.079	ENSHBUG00000002669	gpatch8	59	61.926	Haplochromis_burtoni
ENSIPUG00000015431	gpatch8	74	57.546	ENSHGLG00100010738	GPATCH8	62	56.811	Heterocephalus_glaber_male
ENSIPUG00000015431	gpatch8	100	58.964	ENSHCOG00000017518	gpatch8	59	58.242	Hippocampus_comes
ENSIPUG00000015431	gpatch8	100	59.508	ENSLBEG00000023352	gpatch8	59	60.131	Labrus_bergylta
ENSIPUG00000015431	gpatch8	59	76.724	ENSLOCG00000012265	gpatch8	76	70.922	Lepisosteus_oculatus
ENSIPUG00000015431	gpatch8	55	58.637	ENSMAMG00000001618	gpatch8	57	57.669	Mastacembelus_armatus
ENSIPUG00000015431	gpatch8	55	61.298	ENSMZEG00005022584	gpatch8	59	60.242	Maylandia_zebra
ENSIPUG00000015431	gpatch8	55	60.596	ENSMMOG00000020472	gpatch8	59	61.915	Mola_mola
ENSIPUG00000015431	gpatch8	57	60.606	ENSMODG00000011442	GPATCH8	55	63.136	Monodelphis_domestica
ENSIPUG00000015431	gpatch8	55	62.903	ENSNBRG00000016402	gpatch8	100	62.934	Neolamprologus_brichardi
ENSIPUG00000015431	gpatch8	55	60.165	ENSONIG00000001292	gpatch8	59	57.982	Oreochromis_niloticus
ENSIPUG00000015431	gpatch8	55	61.954	ENSORLG00000028497	gpatch8	61	60.087	Oryzias_latipes
ENSIPUG00000015431	gpatch8	57	60.535	ENSORLG00020006656	gpatch8	61	61.734	Oryzias_latipes_hni
ENSIPUG00000015431	gpatch8	55	61.839	ENSORLG00015019797	gpatch8	61	61.985	Oryzias_latipes_hsok
ENSIPUG00000015431	gpatch8	55	59.064	ENSOMEG00000023809	gpatch8	59	61.026	Oryzias_melastigma
ENSIPUG00000015431	gpatch8	60	52.704	ENSPKIG00000018753	gpatch8	56	54.734	Paramormyrops_kingsleyae
ENSIPUG00000015431	gpatch8	55	57.379	ENSPKIG00000004860	GPATCH8	57	55.396	Paramormyrops_kingsleyae
ENSIPUG00000015431	gpatch8	50	64.348	ENSPSIG00000006255	GPATCH8	56	54.237	Pelodiscus_sinensis
ENSIPUG00000015431	gpatch8	100	60.348	ENSPMGG00000000730	gpatch8	99	60.501	Periophthalmus_magnuspinnatus
ENSIPUG00000015431	gpatch8	55	59.629	ENSPFOG00000014833	gpatch8	59	59.219	Poecilia_formosa
ENSIPUG00000015431	gpatch8	55	59.719	ENSPLAG00000001035	gpatch8	59	60.220	Poecilia_latipinna
ENSIPUG00000015431	gpatch8	55	60.395	ENSPMEG00000024032	gpatch8	59	58.894	Poecilia_mexicana
ENSIPUG00000015431	gpatch8	55	60.071	ENSPREG00000008911	gpatch8	59	59.586	Poecilia_reticulata
ENSIPUG00000015431	gpatch8	55	63.298	ENSPNYG00000009426	gpatch8	59	62.569	Pundamilia_nyererei
ENSIPUG00000015431	gpatch8	60	78.228	ENSPNAG00000016200	gpatch8	64	78.526	Pygocentrus_nattereri
ENSIPUG00000015431	gpatch8	55	60.606	ENSSHAG00000016140	GPATCH8	52	63.136	Sarcophilus_harrisii
ENSIPUG00000015431	gpatch8	88	56.401	ENSSFOG00015004299	GPATCH8	90	55.797	Scleropages_formosus
ENSIPUG00000015431	gpatch8	55	55.556	ENSSFOG00015021377	-	55	55.800	Scleropages_formosus
ENSIPUG00000015431	gpatch8	51	57.947	ENSSDUG00000018065	gpatch8	57	59.649	Seriola_dumerili
ENSIPUG00000015431	gpatch8	55	61.144	ENSSLDG00000009225	gpatch8	59	62.486	Seriola_lalandi_dorsalis
ENSIPUG00000015431	gpatch8	55	56.678	ENSTRUG00000020474	gpatch8	59	56.803	Takifugu_rubripes
ENSIPUG00000015431	gpatch8	54	64.609	ENSTBEG00000009486	GPATCH8	52	63.136	Tupaia_belangeri
ENSIPUG00000015431	gpatch8	79	57.712	ENSXETG00000008843	gpatch8	54	65.401	Xenopus_tropicalis
ENSIPUG00000015431	gpatch8	55	58.080	ENSXMAG00000009217	gpatch8	59	58.913	Xiphophorus_maculatus