EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000015443 (Gene tree)
Gene ID: 108274978
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 5819 bases
Position: chr14:25139244-25145062
Accession: 108274978
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000022812	RtcB	PF01139.17	1.1e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000023788	-	2564	XM_017485461	ENSIPUP00000022812	505 (aa)	XP_017340950	A0A2D0SFC9

Gene Model

Click here to download ENSIPUG00000015443's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015443's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015443	rtcb	100	94.653	ENSG00000100220	RTCB	100	94.653	Homo_sapiens
ENSIPUG00000015443	rtcb	100	95.248	ENSAPOG00000006040	rtcb	100	95.248	Acanthochromis_polyacanthus
ENSIPUG00000015443	rtcb	100	94.455	ENSAMEG00000016152	RTCB	100	94.455	Ailuropoda_melanoleuca
ENSIPUG00000015443	rtcb	100	90.693	ENSACIG00000009083	rtcb	100	90.693	Amphilophus_citrinellus
ENSIPUG00000015443	rtcb	100	95.446	ENSAOCG00000005662	rtcb	100	96.304	Amphiprion_ocellaris
ENSIPUG00000015443	rtcb	100	95.446	ENSAPEG00000024701	rtcb	100	95.446	Amphiprion_percula
ENSIPUG00000015443	rtcb	96	90.554	ENSAPEG00000024653	rtcb	100	90.554	Amphiprion_percula
ENSIPUG00000015443	rtcb	100	95.050	ENSATEG00000000618	rtcb	100	95.050	Anabas_testudineus
ENSIPUG00000015443	rtcb	100	91.522	ENSACAG00000014817	RTCB	100	91.522	Anolis_carolinensis
ENSIPUG00000015443	rtcb	72	97.222	ENSANAG00000023724	-	84	97.222	Aotus_nancymaae
ENSIPUG00000015443	rtcb	100	80.000	ENSANAG00000018191	-	91	80.000	Aotus_nancymaae
ENSIPUG00000015443	rtcb	100	95.248	ENSACLG00000008367	rtcb	100	95.652	Astatotilapia_calliptera
ENSIPUG00000015443	rtcb	100	97.030	ENSAMXG00000042320	rtcb	100	97.030	Astyanax_mexicanus
ENSIPUG00000015443	rtcb	100	94.851	ENSBTAG00000011070	RTCB	100	94.851	Bos_taurus
ENSIPUG00000015443	rtcb	100	74.059	WBGene00008877	rtcb-1	100	74.059	Caenorhabditis_elegans
ENSIPUG00000015443	rtcb	100	94.455	ENSCJAG00000006128	RTCB	100	94.455	Callithrix_jacchus
ENSIPUG00000015443	rtcb	100	90.099	ENSCAFG00000010789	-	100	90.099	Canis_familiaris
ENSIPUG00000015443	rtcb	100	94.455	ENSCAFG00000001785	RTCB	100	94.455	Canis_familiaris
ENSIPUG00000015443	rtcb	100	94.455	ENSCAFG00020004890	-	100	94.455	Canis_lupus_dingo
ENSIPUG00000015443	rtcb	87	90.000	ENSCAFG00020018953	-	99	90.000	Canis_lupus_dingo
ENSIPUG00000015443	rtcb	100	94.851	ENSCHIG00000027009	-	100	94.851	Capra_hircus
ENSIPUG00000015443	rtcb	100	94.851	ENSTSYG00000012320	RTCB	100	94.851	Carlito_syrichta
ENSIPUG00000015443	rtcb	94	94.759	ENSCAPG00000011647	RTCB	96	94.759	Cavia_aperea
ENSIPUG00000015443	rtcb	100	94.455	ENSCCAG00000000618	RTCB	100	94.455	Cebus_capucinus
ENSIPUG00000015443	rtcb	100	94.455	ENSCATG00000033424	RTCB	100	94.455	Cercocebus_atys
ENSIPUG00000015443	rtcb	100	94.257	ENSCLAG00000007997	RTCB	100	94.257	Chinchilla_lanigera
ENSIPUG00000015443	rtcb	100	94.257	ENSCSAG00000008351	RTCB	100	94.257	Chlorocebus_sabaeus
ENSIPUG00000015443	rtcb	100	80.198	ENSCHOG00000009123	RTCB	100	80.198	Choloepus_hoffmanni
ENSIPUG00000015443	rtcb	100	94.455	ENSCPBG00000023184	RTCB	100	94.455	Chrysemys_picta_bellii
ENSIPUG00000015443	rtcb	100	82.772	ENSCING00000003830	-	100	82.772	Ciona_intestinalis
ENSIPUG00000015443	rtcb	100	83.564	ENSCSAVG00000008124	-	99	83.564	Ciona_savignyi
ENSIPUG00000015443	rtcb	100	90.693	ENSCANG00000001891	RTCB	100	90.693	Colobus_angolensis_palliatus
ENSIPUG00000015443	rtcb	100	94.653	ENSCGRG00001011173	Rtcb	100	94.653	Cricetulus_griseus_chok1gshd
ENSIPUG00000015443	rtcb	93	94.904	ENSCGRG00000009587	-	96	94.904	Cricetulus_griseus_crigri
ENSIPUG00000015443	rtcb	100	94.059	ENSCSEG00000003986	rtcb	100	94.059	Cynoglossus_semilaevis
ENSIPUG00000015443	rtcb	82	93.750	ENSCVAG00000000569	rtcb	95	93.750	Cyprinodon_variegatus
ENSIPUG00000015443	rtcb	100	95.644	ENSDARG00000101047	rtcb	100	95.644	Danio_rerio
ENSIPUG00000015443	rtcb	80	90.909	ENSDNOG00000012425	RTCB	99	90.909	Dasypus_novemcinctus
ENSIPUG00000015443	rtcb	100	94.653	ENSDORG00000010855	Rtcb	100	94.653	Dipodomys_ordii
ENSIPUG00000015443	rtcb	99	84.493	FBgn0032781	RtcB	99	84.493	Drosophila_melanogaster
ENSIPUG00000015443	rtcb	100	88.317	ENSETEG00000001988	RTCB	100	88.317	Echinops_telfairi
ENSIPUG00000015443	rtcb	100	86.139	ENSEBUG00000014235	rtcb	100	86.139	Eptatretus_burgeri
ENSIPUG00000015443	rtcb	100	94.851	ENSEASG00005019059	RTCB	100	94.851	Equus_asinus_asinus
ENSIPUG00000015443	rtcb	100	94.851	ENSECAG00000023998	RTCB	100	94.851	Equus_caballus
ENSIPUG00000015443	rtcb	89	85.682	ENSEEUG00000006251	RTCB	100	85.682	Erinaceus_europaeus
ENSIPUG00000015443	rtcb	100	83.743	ENSELUG00000009275	rtcb	100	83.743	Esox_lucius
ENSIPUG00000015443	rtcb	100	94.653	ENSFCAG00000026480	RTCB	100	94.653	Felis_catus
ENSIPUG00000015443	rtcb	100	95.248	ENSFALG00000013334	RTCB	100	95.248	Ficedula_albicollis
ENSIPUG00000015443	rtcb	100	94.455	ENSFDAG00000018150	RTCB	100	94.455	Fukomys_damarensis
ENSIPUG00000015443	rtcb	100	95.446	ENSFHEG00000009595	rtcb	100	95.446	Fundulus_heteroclitus
ENSIPUG00000015443	rtcb	100	95.050	ENSGMOG00000018882	rtcb	100	95.050	Gadus_morhua
ENSIPUG00000015443	rtcb	100	94.653	ENSGALG00000012611	RTCB	100	94.653	Gallus_gallus
ENSIPUG00000015443	rtcb	100	94.851	ENSGAFG00000004198	rtcb	100	94.851	Gambusia_affinis
ENSIPUG00000015443	rtcb	100	95.050	ENSGACG00000000586	rtcb	100	95.050	Gasterosteus_aculeatus
ENSIPUG00000015443	rtcb	93	93.617	ENSGAGG00000019133	RTCB	98	93.617	Gopherus_agassizii
ENSIPUG00000015443	rtcb	100	94.653	ENSGGOG00000011402	RTCB	100	94.653	Gorilla_gorilla
ENSIPUG00000015443	rtcb	100	95.248	ENSHBUG00000020571	rtcb	100	95.248	Haplochromis_burtoni
ENSIPUG00000015443	rtcb	93	67.585	ENSHGLG00000001066	-	99	67.585	Heterocephalus_glaber_female
ENSIPUG00000015443	rtcb	100	94.455	ENSHGLG00000004492	RTCB	100	94.455	Heterocephalus_glaber_female
ENSIPUG00000015443	rtcb	100	94.455	ENSHGLG00100008965	RTCB	100	94.455	Heterocephalus_glaber_male
ENSIPUG00000015443	rtcb	100	92.899	ENSHCOG00000006450	rtcb	100	92.899	Hippocampus_comes
ENSIPUG00000015443	rtcb	100	94.257	ENSSTOG00000003878	RTCB	100	94.257	Ictidomys_tridecemlineatus
ENSIPUG00000015443	rtcb	100	94.851	ENSJJAG00000010667	Rtcb	100	94.851	Jaculus_jaculus
ENSIPUG00000015443	rtcb	100	94.653	ENSKMAG00000013178	rtcb	100	94.653	Kryptolebias_marmoratus
ENSIPUG00000015443	rtcb	100	95.248	ENSLBEG00000010566	RTCB	100	95.248	Labrus_bergylta
ENSIPUG00000015443	rtcb	100	94.059	ENSLBEG00000000214	rtcb	100	94.059	Labrus_bergylta
ENSIPUG00000015443	rtcb	100	93.861	ENSLACG00000013033	RTCB	100	93.861	Latimeria_chalumnae
ENSIPUG00000015443	rtcb	100	95.644	ENSLOCG00000016515	rtcb	99	95.644	Lepisosteus_oculatus
ENSIPUG00000015443	rtcb	100	94.059	ENSLAFG00000002082	RTCB	100	94.059	Loxodonta_africana
ENSIPUG00000015443	rtcb	100	94.257	ENSMFAG00000034419	RTCB	100	94.257	Macaca_fascicularis
ENSIPUG00000015443	rtcb	100	94.257	ENSMMUG00000006720	RTCB	100	94.257	Macaca_mulatta
ENSIPUG00000015443	rtcb	100	94.257	ENSMNEG00000040669	RTCB	100	94.257	Macaca_nemestrina
ENSIPUG00000015443	rtcb	100	94.455	ENSMLEG00000040505	RTCB	100	94.455	Mandrillus_leucophaeus
ENSIPUG00000015443	rtcb	100	95.050	ENSMAMG00000020676	rtcb	100	95.050	Mastacembelus_armatus
ENSIPUG00000015443	rtcb	100	95.248	ENSMZEG00005018942	rtcb	100	95.248	Maylandia_zebra
ENSIPUG00000015443	rtcb	100	94.280	ENSMGAG00000012805	RTCB	100	94.280	Meleagris_gallopavo
ENSIPUG00000015443	rtcb	60	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSIPUG00000015443	rtcb	100	75.248	ENSMICG00000036677	-	100	75.248	Microcebus_murinus
ENSIPUG00000015443	rtcb	100	94.455	ENSMICG00000013303	-	100	94.455	Microcebus_murinus
ENSIPUG00000015443	rtcb	100	95.050	ENSMOCG00000002440	Rtcb	100	95.050	Microtus_ochrogaster
ENSIPUG00000015443	rtcb	100	95.050	ENSMMOG00000005987	rtcb	100	95.050	Mola_mola
ENSIPUG00000015443	rtcb	100	94.851	ENSMODG00000001414	RTCB	100	94.851	Monodelphis_domestica
ENSIPUG00000015443	rtcb	100	95.050	ENSMALG00000007603	rtcb	100	95.050	Monopterus_albus
ENSIPUG00000015443	rtcb	100	94.653	MGP_CAROLIEiJ_G0015689	Rtcb	100	94.653	Mus_caroli
ENSIPUG00000015443	rtcb	100	94.653	ENSMUSG00000001783	Rtcb	100	94.653	Mus_musculus
ENSIPUG00000015443	rtcb	100	94.653	MGP_PahariEiJ_G0031396	Rtcb	100	94.653	Mus_pahari
ENSIPUG00000015443	rtcb	100	94.653	MGP_SPRETEiJ_G0016507	Rtcb	100	94.653	Mus_spretus
ENSIPUG00000015443	rtcb	100	94.455	ENSMPUG00000012285	RTCB	100	94.455	Mustela_putorius_furo
ENSIPUG00000015443	rtcb	100	91.716	ENSMLUG00000007803	RTCB	100	91.716	Myotis_lucifugus
ENSIPUG00000015443	rtcb	77	89.655	ENSNGAG00000005093	Rtcb	100	89.655	Nannospalax_galili
ENSIPUG00000015443	rtcb	100	95.446	ENSNBRG00000017202	rtcb	100	95.446	Neolamprologus_brichardi
ENSIPUG00000015443	rtcb	100	94.653	ENSNLEG00000004960	RTCB	100	94.653	Nomascus_leucogenys
ENSIPUG00000015443	rtcb	100	70.495	ENSMEUG00000007809	-	100	70.495	Notamacropus_eugenii
ENSIPUG00000015443	rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSIPUG00000015443	rtcb	85	88.618	ENSODEG00000013033	-	100	88.618	Octodon_degus
ENSIPUG00000015443	rtcb	100	62.772	ENSODEG00000005042	-	100	62.772	Octodon_degus
ENSIPUG00000015443	rtcb	100	95.446	ENSONIG00000007474	rtcb	100	95.446	Oreochromis_niloticus
ENSIPUG00000015443	rtcb	100	94.653	ENSOANG00000005524	RTCB	100	94.653	Ornithorhynchus_anatinus
ENSIPUG00000015443	rtcb	93	94.043	ENSOCUG00000008270	RTCB	96	94.043	Oryctolagus_cuniculus
ENSIPUG00000015443	rtcb	100	95.050	ENSORLG00000020093	rtcb	100	95.050	Oryzias_latipes
ENSIPUG00000015443	rtcb	100	95.446	ENSORLG00020003706	rtcb	100	95.446	Oryzias_latipes_hni
ENSIPUG00000015443	rtcb	100	95.248	ENSORLG00015002968	rtcb	100	95.248	Oryzias_latipes_hsok
ENSIPUG00000015443	rtcb	100	94.653	ENSOMEG00000021278	rtcb	100	94.653	Oryzias_melastigma
ENSIPUG00000015443	rtcb	100	93.861	ENSOGAG00000001425	RTCB	100	93.861	Otolemur_garnettii
ENSIPUG00000015443	rtcb	100	94.851	ENSOARG00000018008	RTCB	100	94.851	Ovis_aries
ENSIPUG00000015443	rtcb	100	94.653	ENSPPAG00000028667	RTCB	100	94.653	Pan_paniscus
ENSIPUG00000015443	rtcb	100	94.653	ENSPPRG00000004038	RTCB	100	94.653	Panthera_pardus
ENSIPUG00000015443	rtcb	94	90.316	ENSPTIG00000020499	RTCB	97	91.368	Panthera_tigris_altaica
ENSIPUG00000015443	rtcb	100	94.653	ENSPTRG00000014287	RTCB	100	94.653	Pan_troglodytes
ENSIPUG00000015443	rtcb	100	94.257	ENSPANG00000016035	RTCB	100	94.257	Papio_anubis
ENSIPUG00000015443	rtcb	100	96.436	ENSPKIG00000001881	rtcb	100	96.436	Paramormyrops_kingsleyae
ENSIPUG00000015443	rtcb	91	95.000	ENSPSIG00000011690	RTCB	100	95.000	Pelodiscus_sinensis
ENSIPUG00000015443	rtcb	100	94.851	ENSPMGG00000016672	rtcb	100	94.851	Periophthalmus_magnuspinnatus
ENSIPUG00000015443	rtcb	100	94.653	ENSPEMG00000019548	Rtcb	100	94.653	Peromyscus_maniculatus_bairdii
ENSIPUG00000015443	rtcb	100	90.693	ENSPMAG00000005657	rtcb	100	90.693	Petromyzon_marinus
ENSIPUG00000015443	rtcb	100	94.851	ENSPCIG00000009467	RTCB	100	94.851	Phascolarctos_cinereus
ENSIPUG00000015443	rtcb	100	95.248	ENSPFOG00000003058	rtcb	100	95.248	Poecilia_formosa
ENSIPUG00000015443	rtcb	100	95.248	ENSPLAG00000017663	rtcb	100	95.248	Poecilia_latipinna
ENSIPUG00000015443	rtcb	100	95.248	ENSPMEG00000006227	rtcb	100	95.248	Poecilia_mexicana
ENSIPUG00000015443	rtcb	100	95.050	ENSPREG00000018467	rtcb	100	95.050	Poecilia_reticulata
ENSIPUG00000015443	rtcb	100	94.653	ENSPPYG00000011752	RTCB	100	94.653	Pongo_abelii
ENSIPUG00000015443	rtcb	93	77.966	ENSPCAG00000013641	RTCB	100	77.966	Procavia_capensis
ENSIPUG00000015443	rtcb	100	94.455	ENSPCOG00000017243	RTCB	100	94.455	Propithecus_coquereli
ENSIPUG00000015443	rtcb	93	93.617	ENSPVAG00000002380	RTCB	100	93.617	Pteropus_vampyrus
ENSIPUG00000015443	rtcb	100	95.248	ENSPNYG00000022760	rtcb	100	95.248	Pundamilia_nyererei
ENSIPUG00000015443	rtcb	100	98.020	ENSPNAG00000009209	rtcb	100	98.020	Pygocentrus_nattereri
ENSIPUG00000015443	rtcb	100	94.653	ENSRNOG00000004813	Rtcb	100	94.653	Rattus_norvegicus
ENSIPUG00000015443	rtcb	100	85.968	ENSRBIG00000042090	RTCB	100	85.968	Rhinopithecus_bieti
ENSIPUG00000015443	rtcb	100	89.901	ENSSBOG00000020085	-	100	89.901	Saimiri_boliviensis_boliviensis
ENSIPUG00000015443	rtcb	94	95.148	ENSSHAG00000016277	RTCB	100	95.148	Sarcophilus_harrisii
ENSIPUG00000015443	rtcb	100	94.455	ENSSFOG00015011572	RTCB	100	94.455	Scleropages_formosus
ENSIPUG00000015443	rtcb	100	94.653	ENSSFOG00015000763	rtcb	100	94.653	Scleropages_formosus
ENSIPUG00000015443	rtcb	100	92.079	ENSSMAG00000005096	rtcb	100	92.079	Scophthalmus_maximus
ENSIPUG00000015443	rtcb	100	94.455	ENSSDUG00000012605	rtcb	100	94.455	Seriola_dumerili
ENSIPUG00000015443	rtcb	100	94.455	ENSSLDG00000019458	rtcb	100	94.455	Seriola_lalandi_dorsalis
ENSIPUG00000015443	rtcb	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSIPUG00000015443	rtcb	100	93.267	ENSSPUG00000012814	RTCB	100	93.267	Sphenodon_punctatus
ENSIPUG00000015443	rtcb	100	95.446	ENSSPAG00000004623	rtcb	100	95.446	Stegastes_partitus
ENSIPUG00000015443	rtcb	100	94.653	ENSSSCG00000000158	RTCB	100	94.653	Sus_scrofa
ENSIPUG00000015443	rtcb	100	95.248	ENSTGUG00000010947	RTCB	99	95.248	Taeniopygia_guttata
ENSIPUG00000015443	rtcb	91	96.304	ENSTRUG00000009880	rtcb	100	96.304	Takifugu_rubripes
ENSIPUG00000015443	rtcb	100	93.861	ENSTNIG00000002484	rtcb	100	93.861	Tetraodon_nigroviridis
ENSIPUG00000015443	rtcb	100	81.782	ENSTBEG00000004418	RTCB	100	81.782	Tupaia_belangeri
ENSIPUG00000015443	rtcb	93	93.404	ENSTTRG00000006417	RTCB	100	93.404	Tursiops_truncatus
ENSIPUG00000015443	rtcb	100	94.455	ENSUAMG00000022792	RTCB	100	94.455	Ursus_americanus
ENSIPUG00000015443	rtcb	100	94.455	ENSUMAG00000017225	RTCB	100	94.455	Ursus_maritimus
ENSIPUG00000015443	rtcb	100	94.455	ENSVPAG00000005375	RTCB	100	94.455	Vicugna_pacos
ENSIPUG00000015443	rtcb	100	94.455	ENSVVUG00000023408	RTCB	100	94.840	Vulpes_vulpes
ENSIPUG00000015443	rtcb	100	92.871	ENSXETG00000011523	rtcb	100	92.871	Xenopus_tropicalis
ENSIPUG00000015443	rtcb	100	94.851	ENSXMAG00000002855	rtcb	100	94.851	Xiphophorus_maculatus