EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000015556 (Gene tree)
Gene ID: 108260409
Gene Symbol: Ddx54
Alias: chunp6913|mgc2835
Full Name: DEAD-box helicase 54
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 12860 bases
Position: chr28:13332708-13345567
Accession: 108260409
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000023185	DBP10CT	PF08147.12	3.3e-16	1	1
ENSIPUP00000023092	DBP10CT	PF08147.12	3.7e-16	1	1
ENSIPUP00000023154	DBP10CT	PF08147.12	1.6e-06	1	1
ENSIPUP00000023092	DEAD	PF00270.29	2.9e-50	1	1
ENSIPUP00000023185	DEAD	PF00270.29	3.3e-50	1	1
ENSIPUP00000023154	DEAD	PF00270.29	1.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000024085	-	4683	XM_017460690	ENSIPUP00000023092	860 (aa)	XP_017316179	W5UHM7
ENSIPUT00000024179	-	2460	-	ENSIPUP00000023185	819 (aa)	-	-
ENSIPUT00000024148	-	2526	-	ENSIPUP00000023154	841 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000015556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015556's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000015556	Ddx54	51	33.259	ENSIPUG00000012876	ddx18	72	33.937

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015556	Ddx54	97	60.839	ENSG00000123064	DDX54	100	88.462	Homo_sapiens
ENSIPUG00000015556	Ddx54	98	75.911	ENSAPOG00000008602	ddx54	100	75.202	Acanthochromis_polyacanthus
ENSIPUG00000015556	Ddx54	97	60.844	ENSAMEG00000008775	DDX54	95	60.702	Ailuropoda_melanoleuca
ENSIPUG00000015556	Ddx54	100	72.077	ENSACIG00000019104	ddx54	100	71.964	Amphilophus_citrinellus
ENSIPUG00000015556	Ddx54	98	75.529	ENSAOCG00000008449	ddx54	100	75.520	Amphiprion_ocellaris
ENSIPUG00000015556	Ddx54	98	75.529	ENSAPEG00000014287	ddx54	100	75.520	Amphiprion_percula
ENSIPUG00000015556	Ddx54	100	73.739	ENSATEG00000018529	ddx54	100	73.402	Anabas_testudineus
ENSIPUG00000015556	Ddx54	95	64.390	ENSAPLG00000013191	DDX54	99	64.347	Anas_platyrhynchos
ENSIPUG00000015556	Ddx54	95	64.355	ENSACAG00000004703	DDX54	96	63.736	Anolis_carolinensis
ENSIPUG00000015556	Ddx54	99	51.919	ENSANAG00000032761	-	95	51.968	Aotus_nancymaae
ENSIPUG00000015556	Ddx54	90	54.326	ENSANAG00000032241	-	95	53.428	Aotus_nancymaae
ENSIPUG00000015556	Ddx54	100	74.564	ENSACLG00000013176	ddx54	100	74.564	Astatotilapia_calliptera
ENSIPUG00000015556	Ddx54	100	81.829	ENSAMXG00000009189	ddx54	100	81.250	Astyanax_mexicanus
ENSIPUG00000015556	Ddx54	97	61.737	ENSBTAG00000011930	DDX54	90	61.287	Bos_taurus
ENSIPUG00000015556	Ddx54	89	47.510	WBGene00022378	Y94H6A.5	91	47.484	Caenorhabditis_elegans
ENSIPUG00000015556	Ddx54	87	62.978	ENSCJAG00000010039	DDX54	80	63.165	Callithrix_jacchus
ENSIPUG00000015556	Ddx54	67	51.730	ENSCAFG00000009029	DDX54	99	51.384	Canis_familiaris
ENSIPUG00000015556	Ddx54	97	60.987	ENSCAFG00020017643	DDX54	96	61.105	Canis_lupus_dingo
ENSIPUG00000015556	Ddx54	97	60.681	ENSCHIG00000026798	DDX54	96	60.282	Capra_hircus
ENSIPUG00000015556	Ddx54	95	58.134	ENSTSYG00000007898	DDX54	94	57.812	Carlito_syrichta
ENSIPUG00000015556	Ddx54	95	61.212	ENSCAPG00000001482	DDX54	99	58.303	Cavia_aperea
ENSIPUG00000015556	Ddx54	98	61.287	ENSCPOG00000020649	DDX54	96	61.170	Cavia_porcellus
ENSIPUG00000015556	Ddx54	97	61.033	ENSCCAG00000022625	DDX54	96	60.910	Cebus_capucinus
ENSIPUG00000015556	Ddx54	97	61.385	ENSCATG00000041943	DDX54	96	61.033	Cercocebus_atys
ENSIPUG00000015556	Ddx54	97	60.188	ENSCLAG00000010748	DDX54	96	59.224	Chinchilla_lanigera
ENSIPUG00000015556	Ddx54	95	61.779	ENSCSAG00000002432	DDX54	90	61.418	Chlorocebus_sabaeus
ENSIPUG00000015556	Ddx54	78	60.264	ENSCPBG00000017982	DDX54	85	60.987	Chrysemys_picta_bellii
ENSIPUG00000015556	Ddx54	88	54.851	ENSCING00000004789	-	92	54.902	Ciona_intestinalis
ENSIPUG00000015556	Ddx54	91	52.459	ENSCSAVG00000008916	-	98	70.482	Ciona_savignyi
ENSIPUG00000015556	Ddx54	95	58.638	ENSCANG00000020637	DDX54	99	58.376	Colobus_angolensis_palliatus
ENSIPUG00000015556	Ddx54	100	60.364	ENSCGRG00001014803	Ddx54	96	61.404	Cricetulus_griseus_chok1gshd
ENSIPUG00000015556	Ddx54	100	60.182	ENSCGRG00000002827	Ddx54	96	61.215	Cricetulus_griseus_crigri
ENSIPUG00000015556	Ddx54	98	70.882	ENSCSEG00000016462	ddx54	100	71.968	Cynoglossus_semilaevis
ENSIPUG00000015556	Ddx54	100	76.097	ENSCVAG00000022404	ddx54	100	75.145	Cyprinodon_variegatus
ENSIPUG00000015556	Ddx54	100	72.644	ENSDARG00000105286	ddx54	100	71.839	Danio_rerio
ENSIPUG00000015556	Ddx54	97	61.287	ENSDNOG00000032913	DDX54	96	61.313	Dasypus_novemcinctus
ENSIPUG00000015556	Ddx54	82	55.791	ENSDORG00000003399	Ddx54	95	55.650	Dipodomys_ordii
ENSIPUG00000015556	Ddx54	86	44.387	FBgn0052344	CG32344	84	47.018	Drosophila_melanogaster
ENSIPUG00000015556	Ddx54	51	88.889	ENSETEG00000008430	-	52	88.889	Echinops_telfairi
ENSIPUG00000015556	Ddx54	82	58.717	ENSEBUG00000008886	ddx54	97	58.883	Eptatretus_burgeri
ENSIPUG00000015556	Ddx54	89	57.198	ENSEASG00005009501	DDX54	100	53.036	Equus_asinus_asinus
ENSIPUG00000015556	Ddx54	97	60.748	ENSECAG00000012890	DDX54	95	67.517	Equus_caballus
ENSIPUG00000015556	Ddx54	63	87.342	ENSEEUG00000008296	-	58	87.342	Erinaceus_europaeus
ENSIPUG00000015556	Ddx54	100	73.536	ENSELUG00000013533	ddx54	100	72.457	Esox_lucius
ENSIPUG00000015556	Ddx54	97	60.187	ENSFCAG00000027806	DDX54	96	60.070	Felis_catus
ENSIPUG00000015556	Ddx54	93	65.006	ENSFALG00000007737	DDX54	100	64.713	Ficedula_albicollis
ENSIPUG00000015556	Ddx54	88	76.512	ENSFDAG00000019953	DDX54	94	76.512	Fukomys_damarensis
ENSIPUG00000015556	Ddx54	100	74.884	ENSFHEG00000018425	ddx54	100	74.306	Fundulus_heteroclitus
ENSIPUG00000015556	Ddx54	96	71.633	ENSGMOG00000011746	ddx54	100	71.429	Gadus_morhua
ENSIPUG00000015556	Ddx54	95	64.885	ENSGALG00000007490	DDX54	97	64.477	Gallus_gallus
ENSIPUG00000015556	Ddx54	100	71.824	ENSGAFG00000010336	ddx54	100	72.171	Gambusia_affinis
ENSIPUG00000015556	Ddx54	100	70.395	ENSGACG00000016793	ddx54	100	70.395	Gasterosteus_aculeatus
ENSIPUG00000015556	Ddx54	95	66.226	ENSGAGG00000022803	DDX54	100	65.479	Gopherus_agassizii
ENSIPUG00000015556	Ddx54	97	60.606	ENSGGOG00000010414	DDX54	96	59.907	Gorilla_gorilla
ENSIPUG00000015556	Ddx54	97	61.520	ENSHGLG00000014411	DDX54	96	61.053	Heterocephalus_glaber_female
ENSIPUG00000015556	Ddx54	97	61.475	ENSHGLG00100018511	DDX54	96	61.007	Heterocephalus_glaber_male
ENSIPUG00000015556	Ddx54	100	73.356	ENSHCOG00000019287	ddx54	100	72.989	Hippocampus_comes
ENSIPUG00000015556	Ddx54	89	60.232	ENSSTOG00000004068	DDX54	100	60.360	Ictidomys_tridecemlineatus
ENSIPUG00000015556	Ddx54	98	60.631	ENSJJAG00000015712	Ddx54	96	60.514	Jaculus_jaculus
ENSIPUG00000015556	Ddx54	100	74.798	ENSKMAG00000017520	ddx54	100	73.727	Kryptolebias_marmoratus
ENSIPUG00000015556	Ddx54	100	69.944	ENSLBEG00000019480	ddx54	100	69.738	Labrus_bergylta
ENSIPUG00000015556	Ddx54	97	67.526	ENSLACG00000008944	DDX54	96	67.514	Latimeria_chalumnae
ENSIPUG00000015556	Ddx54	100	72.203	ENSLOCG00000008485	ddx54	100	70.983	Lepisosteus_oculatus
ENSIPUG00000015556	Ddx54	90	51.980	ENSLAFG00000027782	DDX54	88	75.806	Loxodonta_africana
ENSIPUG00000015556	Ddx54	97	61.144	ENSMFAG00000043636	DDX54	96	61.268	Macaca_fascicularis
ENSIPUG00000015556	Ddx54	97	60.839	ENSMMUG00000021795	DDX54	96	61.124	Macaca_mulatta
ENSIPUG00000015556	Ddx54	97	55.478	ENSMNEG00000043605	DDX54	96	55.738	Macaca_nemestrina
ENSIPUG00000015556	Ddx54	97	58.265	ENSMLEG00000038981	DDX54	95	58.080	Mandrillus_leucophaeus
ENSIPUG00000015556	Ddx54	100	74.915	ENSMAMG00000012784	ddx54	98	74.740	Mastacembelus_armatus
ENSIPUG00000015556	Ddx54	100	73.171	ENSMZEG00005018773	ddx54	100	73.171	Maylandia_zebra
ENSIPUG00000015556	Ddx54	95	63.441	ENSMGAG00000009183	DDX54	100	62.172	Meleagris_gallopavo
ENSIPUG00000015556	Ddx54	98	61.072	ENSMAUG00000011051	Ddx54	96	61.404	Mesocricetus_auratus
ENSIPUG00000015556	Ddx54	100	60.114	ENSMICG00000012217	DDX54	96	60.349	Microcebus_murinus
ENSIPUG00000015556	Ddx54	100	61.257	ENSMOCG00000010835	Ddx54	97	61.305	Microtus_ochrogaster
ENSIPUG00000015556	Ddx54	98	73.018	ENSMMOG00000009634	ddx54	100	72.042	Mola_mola
ENSIPUG00000015556	Ddx54	95	61.818	ENSMODG00000003413	DDX54	90	84.190	Monodelphis_domestica
ENSIPUG00000015556	Ddx54	100	76.559	ENSMALG00000022098	ddx54	98	74.825	Monopterus_albus
ENSIPUG00000015556	Ddx54	98	61.637	MGP_CAROLIEiJ_G0027665	Ddx54	96	62.339	Mus_caroli
ENSIPUG00000015556	Ddx54	98	62.033	ENSMUSG00000029599	Ddx54	96	62.033	Mus_musculus
ENSIPUG00000015556	Ddx54	98	61.253	MGP_PahariEiJ_G0024247	Ddx54	96	61.655	Mus_pahari
ENSIPUG00000015556	Ddx54	98	62.282	MGP_SPRETEiJ_G0028665	Ddx54	96	62.033	Mus_spretus
ENSIPUG00000015556	Ddx54	97	60.164	ENSMPUG00000002574	DDX54	96	59.649	Mustela_putorius_furo
ENSIPUG00000015556	Ddx54	50	41.289	ENSMLUG00000029964	-	98	40.749	Myotis_lucifugus
ENSIPUG00000015556	Ddx54	98	60.768	ENSNGAG00000021313	Ddx54	96	60.631	Nannospalax_galili
ENSIPUG00000015556	Ddx54	78	75.806	ENSNBRG00000005588	ddx54	88	75.806	Neolamprologus_brichardi
ENSIPUG00000015556	Ddx54	97	60.890	ENSNLEG00000000162	DDX54	96	60.539	Nomascus_leucogenys
ENSIPUG00000015556	Ddx54	79	65.007	ENSMEUG00000015392	DDX54	97	64.516	Notamacropus_eugenii
ENSIPUG00000015556	Ddx54	88	55.118	ENSOPRG00000012000	DDX54	86	54.391	Ochotona_princeps
ENSIPUG00000015556	Ddx54	97	58.706	ENSODEG00000014863	DDX54	96	58.471	Octodon_degus
ENSIPUG00000015556	Ddx54	98	59.698	ENSOCUG00000008932	DDX54	96	58.817	Oryctolagus_cuniculus
ENSIPUG00000015556	Ddx54	98	73.318	ENSORLG00000007385	ddx54	98	72.845	Oryzias_latipes
ENSIPUG00000015556	Ddx54	98	73.200	ENSORLG00020000858	ddx54	98	73.200	Oryzias_latipes_hni
ENSIPUG00000015556	Ddx54	98	73.318	ENSORLG00015006956	ddx54	98	72.845	Oryzias_latipes_hsok
ENSIPUG00000015556	Ddx54	98	74.232	ENSOMEG00000003663	ddx54	98	73.939	Oryzias_melastigma
ENSIPUG00000015556	Ddx54	97	61.385	ENSOGAG00000004210	DDX54	96	61.033	Otolemur_garnettii
ENSIPUG00000015556	Ddx54	97	60.844	ENSOARG00000008363	DDX54	96	60.631	Ovis_aries
ENSIPUG00000015556	Ddx54	97	60.279	ENSPPAG00000042178	DDX54	96	59.814	Pan_paniscus
ENSIPUG00000015556	Ddx54	97	58.872	ENSPPRG00000005223	DDX54	96	58.713	Panthera_pardus
ENSIPUG00000015556	Ddx54	72	68.407	ENSPTIG00000019728	DDX54	88	68.120	Panthera_tigris_altaica
ENSIPUG00000015556	Ddx54	97	60.490	ENSPTRG00000005483	DDX54	96	60.023	Pan_troglodytes
ENSIPUG00000015556	Ddx54	97	60.723	ENSPANG00000008883	DDX54	96	61.007	Papio_anubis
ENSIPUG00000015556	Ddx54	100	74.048	ENSPKIG00000018272	ddx54	98	73.557	Paramormyrops_kingsleyae
ENSIPUG00000015556	Ddx54	54	78.571	ENSPSIG00000005055	DDX54	96	78.112	Pelodiscus_sinensis
ENSIPUG00000015556	Ddx54	95	71.655	ENSPMGG00000010988	ddx54	99	71.620	Periophthalmus_magnuspinnatus
ENSIPUG00000015556	Ddx54	100	61.276	ENSPEMG00000016701	Ddx54	96	61.637	Peromyscus_maniculatus_bairdii
ENSIPUG00000015556	Ddx54	100	74.421	ENSPFOG00000019822	ddx54	100	74.421	Poecilia_formosa
ENSIPUG00000015556	Ddx54	100	74.421	ENSPLAG00000004530	ddx54	100	74.421	Poecilia_latipinna
ENSIPUG00000015556	Ddx54	100	74.421	ENSPMEG00000010803	ddx54	100	74.421	Poecilia_mexicana
ENSIPUG00000015556	Ddx54	100	74.596	ENSPREG00000014372	ddx54	100	74.596	Poecilia_reticulata
ENSIPUG00000015556	Ddx54	97	61.268	ENSPPYG00000004984	DDX54	96	61.033	Pongo_abelii
ENSIPUG00000015556	Ddx54	97	56.338	ENSPCAG00000008462	DDX54	88	81.022	Procavia_capensis
ENSIPUG00000015556	Ddx54	97	60.824	ENSPCOG00000006050	DDX54	96	60.824	Propithecus_coquereli
ENSIPUG00000015556	Ddx54	93	81.961	ENSPVAG00000017347	DDX54	88	81.961	Pteropus_vampyrus
ENSIPUG00000015556	Ddx54	100	79.606	ENSPNAG00000014459	ddx54	96	84.686	Pygocentrus_nattereri
ENSIPUG00000015556	Ddx54	98	62.049	ENSRNOG00000001377	Ddx54	92	61.098	Rattus_norvegicus
ENSIPUG00000015556	Ddx54	100	60.682	ENSRBIG00000032535	DDX54	96	61.422	Rhinopithecus_bieti
ENSIPUG00000015556	Ddx54	100	56.689	ENSRROG00000029557	DDX54	95	57.661	Rhinopithecus_roxellana
ENSIPUG00000015556	Ddx54	79	58.025	YDL031W	-	66	58.506	Saccharomyces_cerevisiae
ENSIPUG00000015556	Ddx54	97	61.358	ENSSBOG00000028194	DDX54	96	61.241	Saimiri_boliviensis_boliviensis
ENSIPUG00000015556	Ddx54	95	60.241	ENSSHAG00000015646	DDX54	99	60.964	Sarcophilus_harrisii
ENSIPUG00000015556	Ddx54	100	75.751	ENSSFOG00015014981	ddx54	97	75.268	Scleropages_formosus
ENSIPUG00000015556	Ddx54	98	72.274	ENSSMAG00000003210	ddx54	100	71.412	Scophthalmus_maximus
ENSIPUG00000015556	Ddx54	98	72.603	ENSSDUG00000004474	ddx54	100	73.672	Seriola_dumerili
ENSIPUG00000015556	Ddx54	98	73.303	ENSSLDG00000010380	ddx54	100	72.994	Seriola_lalandi_dorsalis
ENSIPUG00000015556	Ddx54	98	64.539	ENSSPUG00000014141	DDX54	96	64.100	Sphenodon_punctatus
ENSIPUG00000015556	Ddx54	93	72.084	ENSSPAG00000022918	ddx54	97	72.242	Stegastes_partitus
ENSIPUG00000015556	Ddx54	97	61.404	ENSSSCG00000009876	DDX54	96	61.268	Sus_scrofa
ENSIPUG00000015556	Ddx54	94	63.780	ENSTGUG00000009126	DDX54	100	62.561	Taeniopygia_guttata
ENSIPUG00000015556	Ddx54	100	73.394	ENSTRUG00000014939	ddx54	100	72.914	Takifugu_rubripes
ENSIPUG00000015556	Ddx54	100	73.533	ENSTNIG00000009037	ddx54	100	73.356	Tetraodon_nigroviridis
ENSIPUG00000015556	Ddx54	74	80.693	ENSTBEG00000003783	DDX54	77	80.693	Tupaia_belangeri
ENSIPUG00000015556	Ddx54	97	58.596	ENSTTRG00000016678	DDX54	96	58.685	Tursiops_truncatus
ENSIPUG00000015556	Ddx54	97	60.468	ENSUAMG00000028387	DDX54	99	60.245	Ursus_americanus
ENSIPUG00000015556	Ddx54	82	79.800	ENSUMAG00000010245	DDX54	93	80.688	Ursus_maritimus
ENSIPUG00000015556	Ddx54	97	61.105	ENSVVUG00000010212	DDX54	96	61.105	Vulpes_vulpes
ENSIPUG00000015556	Ddx54	99	63.014	ENSXETG00000016410	ddx54	100	63.230	Xenopus_tropicalis
ENSIPUG00000015556	Ddx54	98	73.964	ENSXCOG00000002909	ddx54	98	73.491	Xiphophorus_couchianus
ENSIPUG00000015556	Ddx54	98	74.824	ENSXMAG00000005312	ddx54	98	74.941	Xiphophorus_maculatus