EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000015573 (Gene tree)
Gene ID: 108272751
Gene Symbol: Vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 20059 bases
Position: chr12:21499217-21519275
Accession: 108272751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000023113	tRNA-synt_1g	PF09334.11	5.8e-15	1	1
ENSIPUP00000023113	Anticodon_1	PF08264.13	7.4e-39	1	1
ENSIPUP00000023113	tRNA-synt_1	PF00133.22	1.5e-197	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000024106	-	3296	XM_017481439	ENSIPUP00000023113	1074 (aa)	XP_017336928	W5UEZ5

Gene Model

Click here to download ENSIPUG00000015573's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000015573	Vars2	97	48.378	ENSIPUG00000005218	vars	79	50.456

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015573	Vars2	96	71.785	ENSAPOG00000007396	vars2	95	71.984	Acanthochromis_polyacanthus
ENSIPUG00000015573	Vars2	97	52.812	ENSAMEG00000012997	VARS2	89	54.254	Ailuropoda_melanoleuca
ENSIPUG00000015573	Vars2	98	70.699	ENSACIG00000004344	vars2	95	72.288	Amphilophus_citrinellus
ENSIPUG00000015573	Vars2	96	71.305	ENSAOCG00000000476	vars2	95	71.498	Amphiprion_ocellaris
ENSIPUG00000015573	Vars2	96	71.305	ENSAPEG00000008646	vars2	92	71.498	Amphiprion_percula
ENSIPUG00000015573	Vars2	98	73.245	ENSATEG00000012291	vars2	98	73.245	Anabas_testudineus
ENSIPUG00000015573	Vars2	96	53.883	ENSACAG00000022093	VARS2	91	55.245	Anolis_carolinensis
ENSIPUG00000015573	Vars2	98	52.219	ENSANAG00000038018	VARS2	91	54.032	Aotus_nancymaae
ENSIPUG00000015573	Vars2	99	69.557	ENSACLG00000018673	vars2	95	71.637	Astatotilapia_calliptera
ENSIPUG00000015573	Vars2	100	81.509	ENSAMXG00000017773	vars2	99	82.196	Astyanax_mexicanus
ENSIPUG00000015573	Vars2	99	52.319	ENSBTAG00000010698	VARS2	92	54.129	Bos_taurus
ENSIPUG00000015573	Vars2	98	52.170	ENSCJAG00000019826	VARS2	91	54.335	Callithrix_jacchus
ENSIPUG00000015573	Vars2	96	53.558	ENSCAFG00000000454	VARS2	91	54.683	Canis_familiaris
ENSIPUG00000015573	Vars2	85	57.582	ENSCAFG00020019387	VARS2	89	59.441	Canis_lupus_dingo
ENSIPUG00000015573	Vars2	98	52.528	ENSCHIG00000007847	VARS2	91	54.427	Capra_hircus
ENSIPUG00000015573	Vars2	98	52.642	ENSTSYG00000009904	VARS2	91	54.582	Carlito_syrichta
ENSIPUG00000015573	Vars2	87	54.574	ENSCAPG00000017770	VARS2	98	54.574	Cavia_aperea
ENSIPUG00000015573	Vars2	98	52.190	ENSCPOG00000021834	VARS2	92	54.229	Cavia_porcellus
ENSIPUG00000015573	Vars2	96	52.783	ENSCCAG00000037907	VARS2	91	54.536	Cebus_capucinus
ENSIPUG00000015573	Vars2	96	53.014	ENSCATG00000032554	VARS2	91	54.435	Cercocebus_atys
ENSIPUG00000015573	Vars2	93	54.043	ENSCLAG00000002889	VARS2	90	54.995	Chinchilla_lanigera
ENSIPUG00000015573	Vars2	96	53.301	ENSCSAG00000008327	VARS2	91	54.738	Chlorocebus_sabaeus
ENSIPUG00000015573	Vars2	91	56.968	ENSCPBG00000021502	VARS2	96	56.968	Chrysemys_picta_bellii
ENSIPUG00000015573	Vars2	96	52.727	ENSCANG00000014991	VARS2	90	54.234	Colobus_angolensis_palliatus
ENSIPUG00000015573	Vars2	98	52.493	ENSCGRG00001021535	Vars2	91	54.427	Cricetulus_griseus_chok1gshd
ENSIPUG00000015573	Vars2	98	52.493	ENSCGRG00000014112	Vars2	91	54.427	Cricetulus_griseus_crigri
ENSIPUG00000015573	Vars2	99	63.282	ENSCSEG00000015432	vars2	92	75.758	Cynoglossus_semilaevis
ENSIPUG00000015573	Vars2	65	71.328	ENSCVAG00000017765	vars2	98	71.328	Cyprinodon_variegatus
ENSIPUG00000015573	Vars2	98	75.047	ENSDARG00000056717	vars2	99	75.047	Danio_rerio
ENSIPUG00000015573	Vars2	79	52.037	ENSDORG00000008516	Vars2	93	52.037	Dipodomys_ordii
ENSIPUG00000015573	Vars2	95	47.064	ENSETEG00000014844	VARS2	91	47.804	Echinops_telfairi
ENSIPUG00000015573	Vars2	99	51.476	ENSEASG00005019997	VARS2	95	57.092	Equus_asinus_asinus
ENSIPUG00000015573	Vars2	98	52.434	ENSECAG00000018202	VARS2	91	54.728	Equus_caballus
ENSIPUG00000015573	Vars2	99	72.968	ENSELUG00000017824	vars2	100	72.877	Esox_lucius
ENSIPUG00000015573	Vars2	96	53.524	ENSFCAG00000010531	VARS2	91	54.664	Felis_catus
ENSIPUG00000015573	Vars2	93	54.734	ENSFDAG00000017216	VARS2	89	55.983	Fukomys_damarensis
ENSIPUG00000015573	Vars2	91	67.042	ENSFHEG00000013932	vars2	91	68.274	Fundulus_heteroclitus
ENSIPUG00000015573	Vars2	90	70.134	ENSGMOG00000018960	vars2	99	70.134	Gadus_morhua
ENSIPUG00000015573	Vars2	90	66.546	ENSGAFG00000004737	vars2	92	66.546	Gambusia_affinis
ENSIPUG00000015573	Vars2	93	70.629	ENSGACG00000001464	vars2	99	70.629	Gasterosteus_aculeatus
ENSIPUG00000015573	Vars2	91	56.839	ENSGAGG00000011652	VARS2	98	56.839	Gopherus_agassizii
ENSIPUG00000015573	Vars2	96	52.294	ENSGGOG00000014587	VARS2	91	53.776	Gorilla_gorilla
ENSIPUG00000015573	Vars2	99	67.377	ENSHBUG00000002448	vars2	95	71.154	Haplochromis_burtoni
ENSIPUG00000015573	Vars2	97	52.174	ENSHGLG00000012886	VARS2	90	53.399	Heterocephalus_glaber_female
ENSIPUG00000015573	Vars2	97	52.079	ENSHGLG00100016535	VARS2	93	53.300	Heterocephalus_glaber_male
ENSIPUG00000015573	Vars2	68	69.672	ENSHCOG00000017907	vars2	97	69.672	Hippocampus_comes
ENSIPUG00000015573	Vars2	97	52.457	ENSSTOG00000009924	VARS2	92	53.731	Ictidomys_tridecemlineatus
ENSIPUG00000015573	Vars2	96	52.560	ENSJJAG00000011144	Vars2	90	54.752	Jaculus_jaculus
ENSIPUG00000015573	Vars2	99	68.015	ENSKMAG00000001393	vars2	94	69.620	Kryptolebias_marmoratus
ENSIPUG00000015573	Vars2	51	80.727	ENSLBEG00000005480	-	81	80.727	Labrus_bergylta
ENSIPUG00000015573	Vars2	96	69.452	ENSLBEG00000011949	vars2	92	71.573	Labrus_bergylta
ENSIPUG00000015573	Vars2	95	52.885	ENSLACG00000001576	-	96	53.945	Latimeria_chalumnae
ENSIPUG00000015573	Vars2	99	51.206	ENSLAFG00000015183	VARS2	93	53.029	Loxodonta_africana
ENSIPUG00000015573	Vars2	96	52.823	ENSMFAG00000042367	VARS2	91	54.234	Macaca_fascicularis
ENSIPUG00000015573	Vars2	96	52.919	ENSMMUG00000018609	VARS2	91	54.335	Macaca_mulatta
ENSIPUG00000015573	Vars2	96	53.014	ENSMNEG00000043163	VARS2	91	54.435	Macaca_nemestrina
ENSIPUG00000015573	Vars2	96	53.110	ENSMLEG00000041728	VARS2	89	54.536	Mandrillus_leucophaeus
ENSIPUG00000015573	Vars2	96	70.019	ENSMAMG00000020339	vars2	94	70.508	Mastacembelus_armatus
ENSIPUG00000015573	Vars2	99	69.465	ENSMZEG00005017669	vars2	95	71.540	Maylandia_zebra
ENSIPUG00000015573	Vars2	96	52.823	ENSMAUG00000018946	Vars2	92	53.724	Mesocricetus_auratus
ENSIPUG00000015573	Vars2	83	57.461	ENSMICG00000005365	VARS2	92	60.218	Microcebus_murinus
ENSIPUG00000015573	Vars2	96	47.830	ENSMOCG00000014607	Vars2	89	49.432	Microtus_ochrogaster
ENSIPUG00000015573	Vars2	95	70.078	ENSMMOG00000012122	vars2	96	70.078	Mola_mola
ENSIPUG00000015573	Vars2	94	52.381	ENSMODG00000015848	VARS2	91	52.929	Monodelphis_domestica
ENSIPUG00000015573	Vars2	93	71.825	ENSMALG00000009217	vars2	100	71.825	Monopterus_albus
ENSIPUG00000015573	Vars2	98	52.820	MGP_CAROLIEiJ_G0021529	Vars2	93	58.759	Mus_caroli
ENSIPUG00000015573	Vars2	98	52.394	ENSMUSG00000038838	Vars2	93	58.394	Mus_musculus
ENSIPUG00000015573	Vars2	98	53.002	MGP_PahariEiJ_G0020523	Vars2	93	58.577	Mus_pahari
ENSIPUG00000015573	Vars2	98	52.676	MGP_SPRETEiJ_G0022436	Vars2	93	58.577	Mus_spretus
ENSIPUG00000015573	Vars2	98	52.715	ENSMPUG00000011643	VARS2	91	54.527	Mustela_putorius_furo
ENSIPUG00000015573	Vars2	93	52.959	ENSMLUG00000002356	VARS2	85	54.527	Myotis_lucifugus
ENSIPUG00000015573	Vars2	95	49.806	ENSNGAG00000020607	Vars2	89	51.230	Nannospalax_galili
ENSIPUG00000015573	Vars2	70	65.374	ENSNBRG00000001624	vars2	61	65.193	Neolamprologus_brichardi
ENSIPUG00000015573	Vars2	93	52.320	ENSNLEG00000005625	VARS2	87	53.542	Nomascus_leucogenys
ENSIPUG00000015573	Vars2	76	56.500	ENSMEUG00000014475	VARS2	86	56.500	Notamacropus_eugenii
ENSIPUG00000015573	Vars2	88	52.195	ENSOPRG00000000682	VARS2	83	62.667	Ochotona_princeps
ENSIPUG00000015573	Vars2	93	53.575	ENSODEG00000017965	VARS2	89	55.729	Octodon_degus
ENSIPUG00000015573	Vars2	93	52.432	ENSONIG00000004734	vars2	100	52.432	Oreochromis_niloticus
ENSIPUG00000015573	Vars2	69	46.791	ENSOANG00000000398	-	89	46.933	Ornithorhynchus_anatinus
ENSIPUG00000015573	Vars2	99	48.107	ENSOCUG00000021496	VARS2	59	50.148	Oryctolagus_cuniculus
ENSIPUG00000015573	Vars2	93	68.087	ENSORLG00000010632	vars2	92	68.087	Oryzias_latipes
ENSIPUG00000015573	Vars2	93	68.385	ENSORLG00020018584	vars2	92	68.385	Oryzias_latipes_hni
ENSIPUG00000015573	Vars2	93	68.213	ENSORLG00015010408	vars2	93	68.213	Oryzias_latipes_hsok
ENSIPUG00000015573	Vars2	93	68.484	ENSOMEG00000008360	vars2	93	68.484	Oryzias_melastigma
ENSIPUG00000015573	Vars2	98	51.918	ENSOGAG00000006087	VARS2	89	53.815	Otolemur_garnettii
ENSIPUG00000015573	Vars2	98	52.105	ENSOARG00000010844	VARS2	90	53.970	Ovis_aries
ENSIPUG00000015573	Vars2	96	52.772	ENSPPAG00000041141	VARS2	91	53.877	Pan_paniscus
ENSIPUG00000015573	Vars2	96	53.194	ENSPPRG00000006751	VARS2	89	54.518	Panthera_pardus
ENSIPUG00000015573	Vars2	96	53.098	ENSPTIG00000017799	VARS2	95	54.363	Panthera_tigris_altaica
ENSIPUG00000015573	Vars2	96	52.772	ENSPTRG00000034497	VARS2	91	53.877	Pan_troglodytes
ENSIPUG00000015573	Vars2	96	53.014	ENSPANG00000018481	VARS2	91	55.787	Papio_anubis
ENSIPUG00000015573	Vars2	99	70.682	ENSPKIG00000011372	vars2	99	70.588	Paramormyrops_kingsleyae
ENSIPUG00000015573	Vars2	59	63.994	ENSPSIG00000006206	VARS2	92	63.636	Pelodiscus_sinensis
ENSIPUG00000015573	Vars2	98	69.007	ENSPMGG00000000465	vars2	99	69.007	Periophthalmus_magnuspinnatus
ENSIPUG00000015573	Vars2	99	52.275	ENSPEMG00000014691	Vars2	92	54.014	Peromyscus_maniculatus_bairdii
ENSIPUG00000015573	Vars2	92	54.472	ENSPCIG00000015040	VARS2	89	55.775	Phascolarctos_cinereus
ENSIPUG00000015573	Vars2	99	66.110	ENSPFOG00000017616	vars2	99	66.017	Poecilia_formosa
ENSIPUG00000015573	Vars2	99	65.645	ENSPLAG00000019778	vars2	94	67.882	Poecilia_latipinna
ENSIPUG00000015573	Vars2	99	65.613	ENSPMEG00000011123	vars2	94	67.783	Poecilia_mexicana
ENSIPUG00000015573	Vars2	94	61.149	ENSPREG00000014998	vars2	93	61.996	Poecilia_reticulata
ENSIPUG00000015573	Vars2	93	53.550	ENSPPYG00000016424	VARS2	89	55.047	Pongo_abelii
ENSIPUG00000015573	Vars2	63	54.833	ENSPCAG00000006946	VARS2	76	54.833	Procavia_capensis
ENSIPUG00000015573	Vars2	99	50.921	ENSPCOG00000014839	VARS2	91	52.709	Propithecus_coquereli
ENSIPUG00000015573	Vars2	97	52.091	ENSPVAG00000004197	VARS2	91	53.561	Pteropus_vampyrus
ENSIPUG00000015573	Vars2	86	78.649	ENSPNYG00000010314	vars2	99	78.649	Pundamilia_nyererei
ENSIPUG00000015573	Vars2	99	82.472	ENSPNAG00000026793	vars2	99	82.934	Pygocentrus_nattereri
ENSIPUG00000015573	Vars2	98	52.300	ENSRNOG00000000833	Vars2	92	53.479	Rattus_norvegicus
ENSIPUG00000015573	Vars2	96	52.677	ENSRBIG00000032725	VARS2	91	54.133	Rhinopithecus_bieti
ENSIPUG00000015573	Vars2	96	52.632	ENSRROG00000043847	VARS2	91	53.978	Rhinopithecus_roxellana
ENSIPUG00000015573	Vars2	96	51.880	ENSSBOG00000033240	VARS2	89	53.156	Saimiri_boliviensis_boliviensis
ENSIPUG00000015573	Vars2	95	52.827	ENSSHAG00000009307	VARS2	92	53.831	Sarcophilus_harrisii
ENSIPUG00000015573	Vars2	95	72.098	ENSSFOG00015016187	vars2	93	72.682	Scleropages_formosus
ENSIPUG00000015573	Vars2	95	71.623	ENSSMAG00000020842	vars2	93	80.822	Scophthalmus_maximus
ENSIPUG00000015573	Vars2	95	73.288	ENSSDUG00000011598	vars2	93	73.960	Seriola_dumerili
ENSIPUG00000015573	Vars2	91	74.642	ENSSLDG00000015492	vars2	92	74.642	Seriola_lalandi_dorsalis
ENSIPUG00000015573	Vars2	50	60.000	ENSSARG00000003786	-	61	60.000	Sorex_araneus
ENSIPUG00000015573	Vars2	78	61.730	ENSSPUG00000014700	VARS2	87	61.730	Sphenodon_punctatus
ENSIPUG00000015573	Vars2	99	68.250	ENSSPAG00000004654	vars2	99	67.970	Stegastes_partitus
ENSIPUG00000015573	Vars2	98	53.615	ENSSSCG00000001384	VARS2	92	57.128	Sus_scrofa
ENSIPUG00000015573	Vars2	93	69.840	ENSTRUG00000005264	vars2	93	69.840	Takifugu_rubripes
ENSIPUG00000015573	Vars2	95	65.698	ENSTNIG00000005916	vars2	93	67.198	Tetraodon_nigroviridis
ENSIPUG00000015573	Vars2	87	51.876	ENSTTRG00000012243	VARS2	82	52.980	Tursiops_truncatus
ENSIPUG00000015573	Vars2	95	53.243	ENSUAMG00000026124	VARS2	98	54.634	Ursus_americanus
ENSIPUG00000015573	Vars2	95	53.540	ENSUMAG00000019894	VARS2	91	54.481	Ursus_maritimus
ENSIPUG00000015573	Vars2	96	53.384	ENSVVUG00000010754	VARS2	88	54.303	Vulpes_vulpes
ENSIPUG00000015573	Vars2	84	55.727	ENSXETG00000003036	vars2	93	55.727	Xenopus_tropicalis
ENSIPUG00000015573	Vars2	95	68.996	ENSXCOG00000003455	vars2	94	70.031	Xiphophorus_couchianus
ENSIPUG00000015573	Vars2	97	67.519	ENSXMAG00000013523	vars2	94	68.566	Xiphophorus_maculatus