EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000015601 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 24003 bases
Position: chr25:410943-434945
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000023017	zf-C2H2	PF00096.26	4.8e-43	1	6
ENSIPUP00000023017	zf-C2H2	PF00096.26	4.8e-43	2	6
ENSIPUP00000023017	zf-C2H2	PF00096.26	4.8e-43	3	6
ENSIPUP00000023017	zf-C2H2	PF00096.26	4.8e-43	4	6
ENSIPUP00000023017	zf-C2H2	PF00096.26	4.8e-43	5	6
ENSIPUP00000023017	zf-C2H2	PF00096.26	4.8e-43	6	6
ENSIPUP00000023017	zf-met	PF12874.7	2.5e-11	1	2
ENSIPUP00000023017	zf-met	PF12874.7	2.5e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000024003	-	4070	-	ENSIPUP00000023017	391 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000015601's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015601's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000015601	-	52	64.583	ENSIPUG00000002655	-	98	64.583
ENSIPUG00000015601	-	69	65.680	ENSIPUG00000009750	-	94	65.680
ENSIPUG00000015601	-	50	64.171	ENSIPUG00000007934	-	94	64.171
ENSIPUG00000015601	-	51	58.462	ENSIPUG00000021434	-	90	58.462
ENSIPUG00000015601	-	73	64.646	ENSIPUG00000023635	-	95	62.644
ENSIPUG00000015601	-	68	63.333	ENSIPUG00000005339	-	83	63.333
ENSIPUG00000015601	-	69	63.131	ENSIPUG00000022751	-	96	63.131
ENSIPUG00000015601	-	69	43.976	ENSIPUG00000011258	-	86	38.249
ENSIPUG00000015601	-	68	43.636	ENSIPUG00000004905	znf236	63	43.636
ENSIPUG00000015601	-	61	34.568	ENSIPUG00000013526	-	65	34.568
ENSIPUG00000015601	-	86	76.627	ENSIPUG00000015294	-	89	76.331
ENSIPUG00000015601	-	71	59.701	ENSIPUG00000006916	-	86	59.701
ENSIPUG00000015601	-	63	65.517	ENSIPUG00000001941	-	93	65.517
ENSIPUG00000015601	-	68	57.399	ENSIPUG00000021518	-	89	63.590
ENSIPUG00000015601	-	70	31.579	ENSIPUG00000002510	-	59	31.579
ENSIPUG00000015601	-	61	62.105	ENSIPUG00000005733	-	76	62.105
ENSIPUG00000015601	-	57	42.568	ENSIPUG00000019706	-	50	42.568
ENSIPUG00000015601	-	95	77.838	ENSIPUG00000015468	-	92	77.838
ENSIPUG00000015601	-	52	49.091	ENSIPUG00000012109	ZN12	59	49.091
ENSIPUG00000015601	-	60	49.231	ENSIPUG00000016009	znf596	65	51.462
ENSIPUG00000015601	-	53	44.578	ENSIPUG00000008581	znf319b	87	44.578
ENSIPUG00000015601	-	68	63.830	ENSIPUG00000003960	-	77	63.830
ENSIPUG00000015601	-	86	36.000	ENSIPUG00000015844	snai1b	87	30.000
ENSIPUG00000015601	-	50	66.327	ENSIPUG00000021998	-	93	66.327
ENSIPUG00000015601	-	68	63.158	ENSIPUG00000021441	-	97	63.158
ENSIPUG00000015601	-	54	47.561	ENSIPUG00000011652	znf648	80	47.101
ENSIPUG00000015601	-	60	61.170	ENSIPUG00000004428	-	86	61.170
ENSIPUG00000015601	-	70	69.725	ENSIPUG00000012960	-	95	69.725
ENSIPUG00000015601	-	95	59.341	ENSIPUG00000015233	-	88	59.341
ENSIPUG00000015601	-	70	73.239	ENSIPUG00000015400	-	94	73.239
ENSIPUG00000015601	-	79	42.249	ENSIPUG00000023761	-	88	56.021
ENSIPUG00000015601	-	73	55.273	ENSIPUG00000017575	-	61	58.639
ENSIPUG00000015601	-	69	65.294	ENSIPUG00000003011	-	56	65.294
ENSIPUG00000015601	-	52	50.000	ENSIPUG00000022266	ZNF135	61	50.000
ENSIPUG00000015601	-	95	65.942	ENSIPUG00000015177	-	88	65.942
ENSIPUG00000015601	-	50	33.163	ENSIPUG00000015037	znf711	52	35.227
ENSIPUG00000015601	-	69	58.163	ENSIPUG00000013315	-	97	58.163
ENSIPUG00000015601	-	88	59.615	ENSIPUG00000016075	-	99	64.615
ENSIPUG00000015601	-	70	39.896	ENSIPUG00000011967	zbtb41	58	39.896
ENSIPUG00000015601	-	51	65.341	ENSIPUG00000021484	-	98	65.341
ENSIPUG00000015601	-	74	61.429	ENSIPUG00000006936	-	92	61.429
ENSIPUG00000015601	-	55	40.120	ENSIPUG00000001248	prdm5	74	40.120
ENSIPUG00000015601	-	60	60.976	ENSIPUG00000021556	-	99	60.976
ENSIPUG00000015601	-	95	64.286	ENSIPUG00000015121	-	89	64.286
ENSIPUG00000015601	-	80	49.231	ENSIPUG00000019205	-	79	50.867
ENSIPUG00000015601	-	92	62.286	ENSIPUG00000022741	-	97	62.286
ENSIPUG00000015601	-	50	67.188	ENSIPUG00000013065	-	93	67.188
ENSIPUG00000015601	-	75	64.103	ENSIPUG00000021515	-	91	64.103
ENSIPUG00000015601	-	50	41.875	ENSIPUG00000011399	zbtb47b	73	39.459
ENSIPUG00000015601	-	72	33.775	ENSIPUG00000024011	-	51	33.775
ENSIPUG00000015601	-	50	44.118	ENSIPUG00000012830	-	78	44.118
ENSIPUG00000015601	-	68	60.396	ENSIPUG00000021527	-	97	60.396
ENSIPUG00000015601	-	68	36.129	ENSIPUG00000018102	znf646	67	34.112
ENSIPUG00000015601	-	52	45.652	ENSIPUG00000020760	-	54	45.652
ENSIPUG00000015601	-	59	42.775	ENSIPUG00000007076	-	94	40.741
ENSIPUG00000015601	-	94	60.274	ENSIPUG00000015203	-	87	67.568
ENSIPUG00000015601	-	54	65.882	ENSIPUG00000011073	-	97	65.882
ENSIPUG00000015601	-	78	63.590	ENSIPUG00000005581	-	89	63.590
ENSIPUG00000015601	-	60	57.021	ENSIPUG00000021472	-	90	57.021
ENSIPUG00000015601	-	68	65.766	ENSIPUG00000023688	-	98	64.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015601	-	51	66.471	ENSAMXG00000035683	-	91	66.471	Astyanax_mexicanus
ENSIPUG00000015601	-	68	51.977	ENSCPBG00000002063	-	62	51.977	Chrysemys_picta_bellii
ENSIPUG00000015601	-	50	60.577	ENSGAGG00000017640	-	56	60.577	Gopherus_agassizii
ENSIPUG00000015601	-	60	57.143	ENSGAGG00000005331	-	81	57.143	Gopherus_agassizii
ENSIPUG00000015601	-	57	44.444	ENSHCOG00000001292	-	70	44.444	Hippocampus_comes
ENSIPUG00000015601	-	51	52.632	ENSHCOG00000014786	-	97	52.632	Hippocampus_comes
ENSIPUG00000015601	-	69	49.032	ENSLBEG00000011040	-	54	49.032	Labrus_bergylta
ENSIPUG00000015601	-	56	49.701	ENSORLG00020001707	-	82	47.489	Oryzias_latipes_hni
ENSIPUG00000015601	-	50	54.450	ENSPCIG00000019333	-	88	54.450	Phascolarctos_cinereus
ENSIPUG00000015601	-	54	46.154	ENSPFOG00000011209	-	61	46.154	Poecilia_formosa
ENSIPUG00000015601	-	68	54.110	ENSPFOG00000024567	-	99	54.110	Poecilia_formosa
ENSIPUG00000015601	-	55	54.338	ENSPNAG00000009741	-	61	54.338	Pygocentrus_nattereri
ENSIPUG00000015601	-	72	68.605	ENSPNAG00000018409	-	91	68.605	Pygocentrus_nattereri
ENSIPUG00000015601	-	51	64.118	ENSPNAG00000008491	-	73	64.118	Pygocentrus_nattereri