EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000015830 (Gene tree)
Gene ID: 100304970
Gene Symbol: Sbno1
Alias: -
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 13811 bases
Position: chr16:20222068-20235878
Accession: 100304970
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000023675	ResIII	PF04851.15	2.7e-07	1	1
ENSIPUP00000023702	ResIII	PF04851.15	1.4e-05	1	1
ENSIPUP00000023656	ResIII	PF04851.15	3.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000024714	-	3705	-	ENSIPUP00000023702	1234 (aa)	-	-
ENSIPUT00000024685	-	4260	XM_017488563	ENSIPUP00000023675	1419 (aa)	XP_017344052	W5UE56
ENSIPUT00000024667	-	4293	-	ENSIPUP00000023656	1430 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000015830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015830's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000015830	Sbno1	69	66.591	ENSIPUG00000019672	sbno2	76	66.591
ENSIPUG00000015830	Sbno1	68	65.760	ENSIPUG00000000537	si:ch73-63e15.2	70	65.760

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015830	Sbno1	98	78.378	ENSG00000139697	SBNO1	99	78.622	Homo_sapiens
ENSIPUG00000015830	Sbno1	81	87.013	ENSAPOG00000003196	sbno1	98	86.320	Acanthochromis_polyacanthus
ENSIPUG00000015830	Sbno1	98	78.738	ENSAMEG00000015151	SBNO1	99	78.668	Ailuropoda_melanoleuca
ENSIPUG00000015830	Sbno1	98	79.408	ENSACIG00000008088	sbno1	99	78.914	Amphilophus_citrinellus
ENSIPUG00000015830	Sbno1	98	82.276	ENSAOCG00000014859	sbno1	99	81.999	Amphiprion_ocellaris
ENSIPUG00000015830	Sbno1	98	82.276	ENSAPEG00000006069	sbno1	99	81.999	Amphiprion_percula
ENSIPUG00000015830	Sbno1	98	83.569	ENSATEG00000006667	sbno1	100	82.649	Anabas_testudineus
ENSIPUG00000015830	Sbno1	98	78.862	ENSAPLG00000015674	SBNO1	99	79.345	Anas_platyrhynchos
ENSIPUG00000015830	Sbno1	98	78.074	ENSACAG00000015441	SBNO1	88	78.163	Anolis_carolinensis
ENSIPUG00000015830	Sbno1	92	88.889	ENSANAG00000029958	-	99	85.921	Aotus_nancymaae
ENSIPUG00000015830	Sbno1	98	78.469	ENSACLG00000024913	sbno1	100	77.969	Astatotilapia_calliptera
ENSIPUG00000015830	Sbno1	98	92.970	ENSAMXG00000019473	sbno1	100	92.898	Astyanax_mexicanus
ENSIPUG00000015830	Sbno1	98	79.060	ENSBTAG00000020505	SBNO1	99	79.060	Bos_taurus
ENSIPUG00000015830	Sbno1	98	78.521	ENSCJAG00000016599	SBNO1	99	78.622	Callithrix_jacchus
ENSIPUG00000015830	Sbno1	98	78.723	ENSCAFG00000007503	SBNO1	90	90.708	Canis_familiaris
ENSIPUG00000015830	Sbno1	93	85.484	ENSCAFG00020015363	SBNO1	99	83.453	Canis_lupus_dingo
ENSIPUG00000015830	Sbno1	93	89.247	ENSCHIG00000008382	SBNO1	99	86.413	Capra_hircus
ENSIPUG00000015830	Sbno1	93	87.599	ENSTSYG00000012749	SBNO1	99	79.964	Carlito_syrichta
ENSIPUG00000015830	Sbno1	87	89.516	ENSCAPG00000000384	SBNO1	99	86.151	Cavia_aperea
ENSIPUG00000015830	Sbno1	93	89.516	ENSCPOG00000008109	SBNO1	99	86.151	Cavia_porcellus
ENSIPUG00000015830	Sbno1	98	74.200	ENSCCAG00000035316	SBNO1	99	74.686	Cebus_capucinus
ENSIPUG00000015830	Sbno1	89	88.978	ENSCATG00000008239	SBNO1	99	85.791	Cercocebus_atys
ENSIPUG00000015830	Sbno1	93	89.785	ENSCLAG00000008995	SBNO1	99	86.331	Chinchilla_lanigera
ENSIPUG00000015830	Sbno1	82	82.268	ENSCSAG00000002064	SBNO1	99	83.505	Chlorocebus_sabaeus
ENSIPUG00000015830	Sbno1	93	85.586	ENSCHOG00000008814	SBNO1	96	75.996	Choloepus_hoffmanni
ENSIPUG00000015830	Sbno1	98	78.862	ENSCPBG00000025968	SBNO1	99	78.663	Chrysemys_picta_bellii
ENSIPUG00000015830	Sbno1	98	74.450	ENSCANG00000042688	-	99	74.592	Colobus_angolensis_palliatus
ENSIPUG00000015830	Sbno1	93	87.634	ENSCGRG00001017470	Sbno1	99	84.560	Cricetulus_griseus_chok1gshd
ENSIPUG00000015830	Sbno1	93	87.634	ENSCGRG00000004756	Sbno1	99	84.560	Cricetulus_griseus_crigri
ENSIPUG00000015830	Sbno1	98	81.235	ENSCSEG00000011919	sbno1	100	81.348	Cynoglossus_semilaevis
ENSIPUG00000015830	Sbno1	98	82.320	ENSCVAG00000007038	sbno1	100	81.657	Cyprinodon_variegatus
ENSIPUG00000015830	Sbno1	98	89.353	ENSDARG00000099080	sbno1	99	88.273	Danio_rerio
ENSIPUG00000015830	Sbno1	98	80.381	ENSDNOG00000017147	SBNO1	99	78.125	Dasypus_novemcinctus
ENSIPUG00000015830	Sbno1	98	72.394	ENSDORG00000015261	Sbno1	99	71.895	Dipodomys_ordii
ENSIPUG00000015830	Sbno1	91	74.843	ENSETEG00000005620	SBNO1	93	74.843	Echinops_telfairi
ENSIPUG00000015830	Sbno1	84	62.361	ENSEBUG00000013823	sbno1	93	62.372	Eptatretus_burgeri
ENSIPUG00000015830	Sbno1	58	75.174	ENSEASG00005012595	-	92	76.438	Equus_asinus_asinus
ENSIPUG00000015830	Sbno1	98	78.876	ENSECAG00000006127	SBNO1	99	79.459	Equus_caballus
ENSIPUG00000015830	Sbno1	81	79.781	ENSEEUG00000003793	SBNO1	82	79.781	Erinaceus_europaeus
ENSIPUG00000015830	Sbno1	98	86.170	ENSELUG00000002886	sbno1	99	85.674	Esox_lucius
ENSIPUG00000015830	Sbno1	98	78.977	ENSFCAG00000015331	SBNO1	99	78.906	Felis_catus
ENSIPUG00000015830	Sbno1	98	78.862	ENSFALG00000009273	SBNO1	99	79.487	Ficedula_albicollis
ENSIPUG00000015830	Sbno1	92	84.824	ENSFDAG00000014232	SBNO1	99	83.063	Fukomys_damarensis
ENSIPUG00000015830	Sbno1	98	81.773	ENSFHEG00000007360	sbno1	100	81.206	Fundulus_heteroclitus
ENSIPUG00000015830	Sbno1	93	84.370	ENSGMOG00000018229	sbno1	99	83.232	Gadus_morhua
ENSIPUG00000015830	Sbno1	98	79.350	ENSGALG00000003392	SBNO1	99	79.694	Gallus_gallus
ENSIPUG00000015830	Sbno1	98	82.549	ENSGAFG00000003960	sbno1	100	81.812	Gambusia_affinis
ENSIPUG00000015830	Sbno1	93	83.409	ENSGACG00000015633	sbno1	99	82.576	Gasterosteus_aculeatus
ENSIPUG00000015830	Sbno1	95	91.176	ENSGAGG00000001065	SBNO1	99	87.004	Gopherus_agassizii
ENSIPUG00000015830	Sbno1	93	89.247	ENSGGOG00000015000	SBNO1	99	85.971	Gorilla_gorilla
ENSIPUG00000015830	Sbno1	98	72.591	ENSHBUG00000011910	sbno1	100	72.305	Haplochromis_burtoni
ENSIPUG00000015830	Sbno1	92	89.702	ENSHGLG00000014165	-	99	86.462	Heterocephalus_glaber_female
ENSIPUG00000015830	Sbno1	92	90.000	ENSHCOG00000003246	sbno1	95	84.837	Hippocampus_comes
ENSIPUG00000015830	Sbno1	93	88.978	ENSSTOG00000023221	SBNO1	99	85.791	Ictidomys_tridecemlineatus
ENSIPUG00000015830	Sbno1	98	78.977	ENSJJAG00000001741	Sbno1	99	82.014	Jaculus_jaculus
ENSIPUG00000015830	Sbno1	98	82.968	ENSKMAG00000009696	sbno1	99	81.605	Kryptolebias_marmoratus
ENSIPUG00000015830	Sbno1	98	82.524	ENSLBEG00000007623	sbno1	100	82.191	Labrus_bergylta
ENSIPUG00000015830	Sbno1	99	77.518	ENSLACG00000017227	SBNO1	99	78.198	Latimeria_chalumnae
ENSIPUG00000015830	Sbno1	98	86.396	ENSLOCG00000005725	sbno1	97	85.755	Lepisosteus_oculatus
ENSIPUG00000015830	Sbno1	98	78.165	ENSLAFG00000002135	SBNO1	99	78.196	Loxodonta_africana
ENSIPUG00000015830	Sbno1	94	88.978	ENSMFAG00000031429	SBNO1	99	82.562	Macaca_fascicularis
ENSIPUG00000015830	Sbno1	94	88.978	ENSMMUG00000011496	SBNO1	99	82.562	Macaca_mulatta
ENSIPUG00000015830	Sbno1	93	88.978	ENSMLEG00000033260	SBNO1	99	85.791	Mandrillus_leucophaeus
ENSIPUG00000015830	Sbno1	98	82.955	ENSMAMG00000005473	sbno1	100	82.224	Mastacembelus_armatus
ENSIPUG00000015830	Sbno1	98	79.235	ENSMGAG00000003274	SBNO1	99	79.694	Meleagris_gallopavo
ENSIPUG00000015830	Sbno1	56	76.327	ENSMAUG00000004834	-	98	76.879	Mesocricetus_auratus
ENSIPUG00000015830	Sbno1	92	84.824	ENSMICG00000006573	-	99	83.394	Microcebus_murinus
ENSIPUG00000015830	Sbno1	93	88.710	ENSMOCG00000009390	Sbno1	99	85.099	Microtus_ochrogaster
ENSIPUG00000015830	Sbno1	98	77.596	ENSMMOG00000008691	sbno1	99	77.557	Mola_mola
ENSIPUG00000015830	Sbno1	98	78.895	ENSMODG00000012470	SBNO1	99	78.683	Monodelphis_domestica
ENSIPUG00000015830	Sbno1	98	82.282	ENSMALG00000001056	sbno1	100	81.413	Monopterus_albus
ENSIPUG00000015830	Sbno1	98	78.704	MGP_CAROLIEiJ_G0027749	Sbno1	95	90.789	Mus_caroli
ENSIPUG00000015830	Sbno1	98	78.887	ENSMUSG00000038095	Sbno1	94	90.789	Mus_musculus
ENSIPUG00000015830	Sbno1	98	78.708	MGP_PahariEiJ_G0024329	Sbno1	95	90.789	Mus_pahari
ENSIPUG00000015830	Sbno1	98	78.887	MGP_SPRETEiJ_G0028747	Sbno1	95	90.789	Mus_spretus
ENSIPUG00000015830	Sbno1	98	78.977	ENSMPUG00000001658	SBNO1	99	78.906	Mustela_putorius_furo
ENSIPUG00000015830	Sbno1	98	78.846	ENSMLUG00000017159	SBNO1	99	78.622	Myotis_lucifugus
ENSIPUG00000015830	Sbno1	93	88.978	ENSNGAG00000012620	Sbno1	98	86.888	Nannospalax_galili
ENSIPUG00000015830	Sbno1	98	78.398	ENSNBRG00000019189	sbno1	100	78.112	Neolamprologus_brichardi
ENSIPUG00000015830	Sbno1	93	82.574	ENSNLEG00000001502	SBNO1	98	81.676	Nomascus_leucogenys
ENSIPUG00000015830	Sbno1	70	76.101	ENSMEUG00000008768	-	93	78.261	Notamacropus_eugenii
ENSIPUG00000015830	Sbno1	98	77.865	ENSOPRG00000011054	SBNO1	99	77.218	Ochotona_princeps
ENSIPUG00000015830	Sbno1	93	89.516	ENSODEG00000009997	SBNO1	99	86.151	Octodon_degus
ENSIPUG00000015830	Sbno1	98	81.250	ENSONIG00000015348	sbno1	100	80.865	Oreochromis_niloticus
ENSIPUG00000015830	Sbno1	98	78.420	ENSOCUG00000002441	SBNO1	94	78.349	Oryctolagus_cuniculus
ENSIPUG00000015830	Sbno1	98	81.671	ENSORLG00000001593	sbno1	100	81.077	Oryzias_latipes
ENSIPUG00000015830	Sbno1	98	81.722	ENSORLG00020015216	sbno1	100	81.121	Oryzias_latipes_hni
ENSIPUG00000015830	Sbno1	98	81.818	ENSORLG00015002726	sbno1	100	81.006	Oryzias_latipes_hsok
ENSIPUG00000015830	Sbno1	98	82.358	ENSOMEG00000019313	sbno1	100	81.818	Oryzias_melastigma
ENSIPUG00000015830	Sbno1	56	74.207	ENSOGAG00000010781	-	98	75.327	Otolemur_garnettii
ENSIPUG00000015830	Sbno1	98	78.861	ENSOARG00000004404	SBNO1	99	78.790	Ovis_aries
ENSIPUG00000015830	Sbno1	93	89.247	ENSPPAG00000024635	SBNO1	99	85.971	Pan_paniscus
ENSIPUG00000015830	Sbno1	98	78.977	ENSPPRG00000022092	SBNO1	99	78.906	Panthera_pardus
ENSIPUG00000015830	Sbno1	98	78.932	ENSPTIG00000017803	SBNO1	99	78.932	Panthera_tigris_altaica
ENSIPUG00000015830	Sbno1	93	89.247	ENSPTRG00000005597	SBNO1	99	85.971	Pan_troglodytes
ENSIPUG00000015830	Sbno1	93	88.978	ENSPANG00000011640	SBNO1	99	85.791	Papio_anubis
ENSIPUG00000015830	Sbno1	98	85.612	ENSPKIG00000001441	sbno1	99	85.694	Paramormyrops_kingsleyae
ENSIPUG00000015830	Sbno1	98	75.909	ENSPSIG00000009256	-	99	75.788	Pelodiscus_sinensis
ENSIPUG00000015830	Sbno1	98	78.335	ENSPSIG00000009572	-	99	78.637	Pelodiscus_sinensis
ENSIPUG00000015830	Sbno1	93	88.710	ENSPEMG00000016087	Sbno1	99	85.278	Peromyscus_maniculatus_bairdii
ENSIPUG00000015830	Sbno1	98	79.071	ENSPCIG00000010985	SBNO1	99	78.962	Phascolarctos_cinereus
ENSIPUG00000015830	Sbno1	98	83.036	ENSPFOG00000005069	sbno1	100	82.307	Poecilia_formosa
ENSIPUG00000015830	Sbno1	98	82.955	ENSPLAG00000015015	sbno1	100	82.236	Poecilia_latipinna
ENSIPUG00000015830	Sbno1	98	83.049	ENSPMEG00000021212	sbno1	100	82.320	Poecilia_mexicana
ENSIPUG00000015830	Sbno1	98	82.249	ENSPREG00000017746	sbno1	100	81.683	Poecilia_reticulata
ENSIPUG00000015830	Sbno1	98	78.348	ENSPPYG00000005084	SBNO1	99	78.378	Pongo_abelii
ENSIPUG00000015830	Sbno1	82	78.733	ENSPCAG00000008634	SBNO1	88	72.039	Procavia_capensis
ENSIPUG00000015830	Sbno1	94	84.875	ENSPCOG00000024277	SBNO1	99	84.875	Propithecus_coquereli
ENSIPUG00000015830	Sbno1	84	89.720	ENSPVAG00000015304	SBNO1	87	86.282	Pteropus_vampyrus
ENSIPUG00000015830	Sbno1	98	80.894	ENSPNYG00000004291	sbno1	100	80.298	Pundamilia_nyererei
ENSIPUG00000015830	Sbno1	98	91.977	ENSPNAG00000015622	sbno1	100	91.905	Pygocentrus_nattereri
ENSIPUG00000015830	Sbno1	93	88.978	ENSRNOG00000001064	Sbno1	99	85.612	Rattus_norvegicus
ENSIPUG00000015830	Sbno1	93	88.978	ENSRROG00000034230	SBNO1	99	85.791	Rhinopithecus_roxellana
ENSIPUG00000015830	Sbno1	95	76.141	ENSSBOG00000015422	SBNO1	99	76.068	Saimiri_boliviensis_boliviensis
ENSIPUG00000015830	Sbno1	98	85.643	ENSSFOG00015019025	sbno1	99	85.786	Scleropages_formosus
ENSIPUG00000015830	Sbno1	98	83.347	ENSSMAG00000013640	sbno1	100	82.553	Scophthalmus_maximus
ENSIPUG00000015830	Sbno1	98	83.779	ENSSDUG00000023480	sbno1	100	83.156	Seriola_dumerili
ENSIPUG00000015830	Sbno1	98	83.861	ENSSLDG00000007928	sbno1	100	83.227	Seriola_lalandi_dorsalis
ENSIPUG00000015830	Sbno1	88	82.742	ENSSARG00000002594	SBNO1	89	83.441	Sorex_araneus
ENSIPUG00000015830	Sbno1	98	77.614	ENSSPUG00000012640	SBNO1	99	78.158	Sphenodon_punctatus
ENSIPUG00000015830	Sbno1	98	83.091	ENSSPAG00000016244	sbno1	100	82.345	Stegastes_partitus
ENSIPUG00000015830	Sbno1	98	78.835	ENSSSCG00000009776	SBNO1	99	78.835	Sus_scrofa
ENSIPUG00000015830	Sbno1	98	78.862	ENSTGUG00000005380	SBNO1	99	79.487	Taeniopygia_guttata
ENSIPUG00000015830	Sbno1	98	81.450	ENSTRUG00000018490	sbno1	99	80.939	Takifugu_rubripes
ENSIPUG00000015830	Sbno1	64	76.952	ENSTNIG00000013506	sbno1	99	76.913	Tetraodon_nigroviridis
ENSIPUG00000015830	Sbno1	98	78.906	ENSUAMG00000019671	SBNO1	99	78.835	Ursus_americanus
ENSIPUG00000015830	Sbno1	98	78.906	ENSUMAG00000004002	SBNO1	99	78.835	Ursus_maritimus
ENSIPUG00000015830	Sbno1	98	73.105	ENSVPAG00000007024	SBNO1	92	73.380	Vicugna_pacos
ENSIPUG00000015830	Sbno1	98	78.835	ENSVVUG00000027807	SBNO1	99	78.764	Vulpes_vulpes
ENSIPUG00000015830	Sbno1	98	75.442	ENSXETG00000031930	SBNO1	99	75.088	Xenopus_tropicalis
ENSIPUG00000015830	Sbno1	99	81.585	ENSXCOG00000011607	sbno1	96	80.096	Xiphophorus_couchianus
ENSIPUG00000015830	Sbno1	98	82.644	ENSXMAG00000002140	sbno1	100	81.825	Xiphophorus_maculatus