EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000015876 (Gene tree)
Gene ID: 108268858
Gene Symbol: thoc2
Alias: Tho2|fb73e08|fd21d11|si:bz1o18.2|wu:fb73e08|wu:fd21d11
Full Name: THO complex 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 60235 bases
Position: chr8:3449296-3509530
Accession: 108268858
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000024186	Tho2	PF11262.8	3.4e-102	1	1
ENSIPUP00000024097	Tho2	PF11262.8	3.8e-102	1	1
ENSIPUP00000023907	Tho2	PF11262.8	1.4e-99	1	1
ENSIPUP00000024097	Thoc2	PF11732.8	3.6e-36	1	1
ENSIPUP00000024186	Thoc2	PF11732.8	4.6e-36	1	1
ENSIPUP00000023907	Thoc2	PF11732.8	1.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000025205	-	4089	-	ENSIPUP00000024186	1362 (aa)	-	-
ENSIPUT00000024922	-	4620	XM_017474134	ENSIPUP00000023907	1539 (aa)	XP_017329623	-
ENSIPUT00000025114	-	4356	-	ENSIPUP00000024097	1451 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000015876's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03013	RNA transport	KEGG
ipu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000015876's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000015876	thoc2	99	72.347	ENSG00000125676	THOC2	99	74.696	Homo_sapiens
ENSIPUG00000015876	thoc2	100	77.460	ENSAPOG00000003459	thoc2	98	79.700	Acanthochromis_polyacanthus
ENSIPUG00000015876	thoc2	99	71.943	ENSAMEG00000014841	THOC2	99	73.017	Ailuropoda_melanoleuca
ENSIPUG00000015876	thoc2	91	79.796	ENSACIG00000015022	thoc2	97	80.319	Amphilophus_citrinellus
ENSIPUG00000015876	thoc2	99	77.850	ENSAOCG00000013305	thoc2	98	79.412	Amphiprion_ocellaris
ENSIPUG00000015876	thoc2	99	77.720	ENSAPEG00000004792	thoc2	98	79.541	Amphiprion_percula
ENSIPUG00000015876	thoc2	99	77.732	ENSATEG00000013110	thoc2	99	77.090	Anabas_testudineus
ENSIPUG00000015876	thoc2	94	77.089	ENSAPLG00000010614	THOC2	100	75.607	Anas_platyrhynchos
ENSIPUG00000015876	thoc2	99	73.089	ENSACAG00000011585	THOC2	99	74.069	Anolis_carolinensis
ENSIPUG00000015876	thoc2	99	70.172	ENSANAG00000034037	-	98	73.737	Aotus_nancymaae
ENSIPUG00000015876	thoc2	99	71.166	ENSANAG00000022505	-	99	73.968	Aotus_nancymaae
ENSIPUG00000015876	thoc2	98	78.680	ENSACLG00000012036	thoc2	100	76.436	Astatotilapia_calliptera
ENSIPUG00000015876	thoc2	100	88.744	ENSAMXG00000014184	thoc2	98	88.813	Astyanax_mexicanus
ENSIPUG00000015876	thoc2	97	73.025	ENSBTAG00000047341	-	98	71.747	Bos_taurus
ENSIPUG00000015876	thoc2	99	72.219	ENSBTAG00000008388	THOC2	99	73.233	Bos_taurus
ENSIPUG00000015876	thoc2	96	33.601	WBGene00015813	thoc-2	98	32.552	Caenorhabditis_elegans
ENSIPUG00000015876	thoc2	99	72.125	ENSCJAG00000016157	THOC2	97	76.522	Callithrix_jacchus
ENSIPUG00000015876	thoc2	99	74.882	ENSCAFG00000018574	THOC2	99	75.981	Canis_familiaris
ENSIPUG00000015876	thoc2	99	73.818	ENSCAFG00020002284	THOC2	99	72.922	Canis_lupus_dingo
ENSIPUG00000015876	thoc2	97	73.605	ENSCHIG00000025851	-	99	71.803	Capra_hircus
ENSIPUG00000015876	thoc2	99	72.443	ENSCHIG00000017733	-	99	72.859	Capra_hircus
ENSIPUG00000015876	thoc2	99	72.834	ENSTSYG00000012292	THOC2	99	71.842	Carlito_syrichta
ENSIPUG00000015876	thoc2	99	70.270	ENSCPOG00000038670	THOC2	99	70.836	Cavia_porcellus
ENSIPUG00000015876	thoc2	99	73.003	ENSCCAG00000021906	THOC2	99	73.171	Cebus_capucinus
ENSIPUG00000015876	thoc2	99	72.534	ENSCATG00000003183	THOC2	99	73.233	Cercocebus_atys
ENSIPUG00000015876	thoc2	99	72.310	ENSCLAG00000002641	THOC2	99	73.557	Chinchilla_lanigera
ENSIPUG00000015876	thoc2	99	72.347	ENSCSAG00000018332	THOC2	99	73.233	Chlorocebus_sabaeus
ENSIPUG00000015876	thoc2	99	75.435	ENSCPBG00000012863	THOC2	99	80.421	Chrysemys_picta_bellii
ENSIPUG00000015876	thoc2	78	59.533	ENSCING00000007364	-	99	56.734	Ciona_intestinalis
ENSIPUG00000015876	thoc2	72	58.717	ENSCSAVG00000007923	-	100	74.468	Ciona_savignyi
ENSIPUG00000015876	thoc2	99	72.534	ENSCANG00000035077	THOC2	99	73.233	Colobus_angolensis_palliatus
ENSIPUG00000015876	thoc2	99	71.899	ENSCGRG00001015509	Thoc2	99	72.219	Cricetulus_griseus_chok1gshd
ENSIPUG00000015876	thoc2	99	71.142	ENSCGRG00001009811	BC005561	99	70.891	Cricetulus_griseus_chok1gshd
ENSIPUG00000015876	thoc2	99	71.142	ENSCGRG00000000980	BC005561	99	70.891	Cricetulus_griseus_crigri
ENSIPUG00000015876	thoc2	99	70.342	ENSCGRG00000001226	Thoc2	99	70.764	Cricetulus_griseus_crigri
ENSIPUG00000015876	thoc2	92	80.357	ENSCSEG00000019946	thoc2	99	77.835	Cynoglossus_semilaevis
ENSIPUG00000015876	thoc2	100	75.128	ENSCVAG00000021509	thoc2	100	74.744	Cyprinodon_variegatus
ENSIPUG00000015876	thoc2	99	86.671	ENSDARG00000037503	thoc2	100	85.504	Danio_rerio
ENSIPUG00000015876	thoc2	99	71.282	ENSDNOG00000012487	THOC2	99	71.731	Dasypus_novemcinctus
ENSIPUG00000015876	thoc2	99	43.139	FBgn0031390	tho2	93	41.881	Drosophila_melanogaster
ENSIPUG00000015876	thoc2	93	67.470	ENSETEG00000016183	THOC2	93	68.034	Echinops_telfairi
ENSIPUG00000015876	thoc2	99	72.207	ENSEASG00005017399	THOC2	100	74.885	Equus_asinus_asinus
ENSIPUG00000015876	thoc2	99	74.929	ENSECAG00000010431	THOC2	99	74.449	Equus_caballus
ENSIPUG00000015876	thoc2	76	87.055	ENSEEUG00000015598	THOC2	78	86.731	Erinaceus_europaeus
ENSIPUG00000015876	thoc2	95	80.014	ENSELUG00000007778	thoc2	98	80.014	Esox_lucius
ENSIPUG00000015876	thoc2	99	72.986	ENSFCAG00000008301	THOC2	99	73.233	Felis_catus
ENSIPUG00000015876	thoc2	99	74.120	ENSFALG00000001519	THOC2	99	74.614	Ficedula_albicollis
ENSIPUG00000015876	thoc2	99	72.275	ENSFDAG00000017237	THOC2	100	73.431	Fukomys_damarensis
ENSIPUG00000015876	thoc2	100	75.593	ENSFHEG00000001695	thoc2	100	75.529	Fundulus_heteroclitus
ENSIPUG00000015876	thoc2	99	75.652	ENSGMOG00000000069	thoc2	97	76.712	Gadus_morhua
ENSIPUG00000015876	thoc2	96	76.289	ENSGALG00000008507	THOC2	99	75.638	Gallus_gallus
ENSIPUG00000015876	thoc2	99	76.248	ENSGAFG00000005902	thoc2	100	76.969	Gambusia_affinis
ENSIPUG00000015876	thoc2	99	77.914	ENSGACG00000020367	thoc2	97	77.914	Gasterosteus_aculeatus
ENSIPUG00000015876	thoc2	99	74.846	ENSGAGG00000024263	THOC2	99	75.658	Gopherus_agassizii
ENSIPUG00000015876	thoc2	99	72.347	ENSGGOG00000000486	THOC2	99	73.233	Gorilla_gorilla
ENSIPUG00000015876	thoc2	95	79.615	ENSHBUG00000003516	thoc2	99	77.808	Haplochromis_burtoni
ENSIPUG00000015876	thoc2	99	71.995	ENSHGLG00000004222	THOC2	99	72.403	Heterocephalus_glaber_female
ENSIPUG00000015876	thoc2	90	84.921	ENSHGLG00100011595	THOC2	92	78.594	Heterocephalus_glaber_male
ENSIPUG00000015876	thoc2	99	74.355	ENSHCOG00000006276	thoc2	99	75.131	Hippocampus_comes
ENSIPUG00000015876	thoc2	99	71.925	ENSSTOG00000009134	THOC2	99	72.875	Ictidomys_tridecemlineatus
ENSIPUG00000015876	thoc2	99	72.055	ENSJJAG00000017282	Thoc2	99	73.062	Jaculus_jaculus
ENSIPUG00000015876	thoc2	99	68.754	ENSJJAG00000008784	BC005561	99	69.399	Jaculus_jaculus
ENSIPUG00000015876	thoc2	98	79.749	ENSKMAG00000012263	thoc2	98	81.320	Kryptolebias_marmoratus
ENSIPUG00000015876	thoc2	99	78.801	ENSLBEG00000003049	thoc2	99	77.865	Labrus_bergylta
ENSIPUG00000015876	thoc2	95	78.979	ENSLACG00000016494	THOC2	99	75.877	Latimeria_chalumnae
ENSIPUG00000015876	thoc2	100	80.364	ENSLOCG00000014546	thoc2	99	81.001	Lepisosteus_oculatus
ENSIPUG00000015876	thoc2	99	72.060	ENSLAFG00000003146	THOC2	99	72.983	Loxodonta_africana
ENSIPUG00000015876	thoc2	99	72.534	ENSMFAG00000042215	THOC2	99	73.233	Macaca_fascicularis
ENSIPUG00000015876	thoc2	99	72.347	ENSMMUG00000003745	THOC2	99	74.022	Macaca_mulatta
ENSIPUG00000015876	thoc2	99	72.534	ENSMNEG00000033627	THOC2	99	73.233	Macaca_nemestrina
ENSIPUG00000015876	thoc2	99	72.534	ENSMLEG00000034817	THOC2	99	73.233	Mandrillus_leucophaeus
ENSIPUG00000015876	thoc2	100	76.854	ENSMAMG00000012993	thoc2	100	76.471	Mastacembelus_armatus
ENSIPUG00000015876	thoc2	100	77.495	ENSMZEG00005015842	thoc2	100	77.128	Maylandia_zebra
ENSIPUG00000015876	thoc2	99	74.905	ENSMGAG00000007345	THOC2	100	74.463	Meleagris_gallopavo
ENSIPUG00000015876	thoc2	99	72.177	ENSMAUG00000002356	Thoc2	99	72.812	Mesocricetus_auratus
ENSIPUG00000015876	thoc2	97	74.167	ENSMICG00000011840	THOC2	99	73.358	Microcebus_murinus
ENSIPUG00000015876	thoc2	99	72.090	ENSMOCG00000009946	Thoc2	99	72.625	Microtus_ochrogaster
ENSIPUG00000015876	thoc2	99	70.094	ENSMOCG00000019406	BC005561	99	70.514	Microtus_ochrogaster
ENSIPUG00000015876	thoc2	98	76.275	ENSMMOG00000016313	thoc2	100	75.948	Mola_mola
ENSIPUG00000015876	thoc2	99	73.125	ENSMODG00000014984	THOC2	99	73.125	Monodelphis_domestica
ENSIPUG00000015876	thoc2	100	75.450	ENSMALG00000019718	thoc2	100	75.450	Monopterus_albus
ENSIPUG00000015876	thoc2	99	70.533	MGP_CAROLIEiJ_G0027482	BC005561	99	70.596	Mus_caroli
ENSIPUG00000015876	thoc2	97	74.303	MGP_CAROLIEiJ_G0033023	Thoc2	99	73.375	Mus_caroli
ENSIPUG00000015876	thoc2	99	72.177	ENSMUSG00000037475	Thoc2	99	73.250	Mus_musculus
ENSIPUG00000015876	thoc2	99	70.721	ENSMUSG00000079065	BC005561	99	70.784	Mus_musculus
ENSIPUG00000015876	thoc2	99	72.115	MGP_PahariEiJ_G0031569	Thoc2	99	73.188	Mus_pahari
ENSIPUG00000015876	thoc2	99	70.703	MGP_PahariEiJ_G0017260	BC005561	99	70.828	Mus_pahari
ENSIPUG00000015876	thoc2	99	72.177	MGP_SPRETEiJ_G0034181	Thoc2	99	73.250	Mus_spretus
ENSIPUG00000015876	thoc2	99	70.721	MGP_SPRETEiJ_G0028479	BC005561	99	70.784	Mus_spretus
ENSIPUG00000015876	thoc2	99	71.985	ENSMPUG00000001357	THOC2	99	72.869	Mustela_putorius_furo
ENSIPUG00000015876	thoc2	97	71.439	ENSMLUG00000026072	-	97	71.789	Myotis_lucifugus
ENSIPUG00000015876	thoc2	88	74.365	ENSMLUG00000027559	-	99	68.988	Myotis_lucifugus
ENSIPUG00000015876	thoc2	97	67.040	ENSMLUG00000028256	-	99	64.096	Myotis_lucifugus
ENSIPUG00000015876	thoc2	99	72.402	ENSMLUG00000013656	-	100	72.693	Myotis_lucifugus
ENSIPUG00000015876	thoc2	99	70.867	ENSNGAG00000010936	BC005561	99	70.345	Nannospalax_galili
ENSIPUG00000015876	thoc2	99	72.096	ENSNGAG00000016184	Thoc2	99	72.035	Nannospalax_galili
ENSIPUG00000015876	thoc2	98	77.498	ENSNBRG00000018089	thoc2	99	77.050	Neolamprologus_brichardi
ENSIPUG00000015876	thoc2	99	68.713	ENSNLEG00000015055	THOC2	99	68.625	Nomascus_leucogenys
ENSIPUG00000015876	thoc2	83	80.057	ENSMEUG00000003533	THOC2	81	80.057	Notamacropus_eugenii
ENSIPUG00000015876	thoc2	99	72.379	ENSODEG00000002478	THOC2	99	73.312	Octodon_degus
ENSIPUG00000015876	thoc2	100	77.241	ENSONIG00000004348	thoc2	99	76.874	Oreochromis_niloticus
ENSIPUG00000015876	thoc2	97	76.103	ENSOANG00000004054	THOC2	99	75.239	Ornithorhynchus_anatinus
ENSIPUG00000015876	thoc2	99	72.264	ENSOCUG00000005996	THOC2	99	73.091	Oryctolagus_cuniculus
ENSIPUG00000015876	thoc2	100	76.081	ENSORLG00000008692	thoc2	100	75.969	Oryzias_latipes
ENSIPUG00000015876	thoc2	99	76.774	ENSORLG00020002321	thoc2	100	74.792	Oryzias_latipes_hni
ENSIPUG00000015876	thoc2	100	75.944	ENSORLG00015000665	thoc2	99	79.149	Oryzias_latipes_hsok
ENSIPUG00000015876	thoc2	99	76.471	ENSOMEG00000004006	thoc2	99	75.959	Oryzias_melastigma
ENSIPUG00000015876	thoc2	97	73.895	ENSOGAG00000000302	THOC2	99	72.858	Otolemur_garnettii
ENSIPUG00000015876	thoc2	99	72.481	ENSOARG00000013665	-	100	73.511	Ovis_aries
ENSIPUG00000015876	thoc2	73	90.625	ENSOARG00000003614	-	90	92.063	Ovis_aries
ENSIPUG00000015876	thoc2	99	71.027	ENSPPAG00000040720	THOC2	99	75.342	Pan_paniscus
ENSIPUG00000015876	thoc2	99	72.281	ENSPPRG00000023137	THOC2	99	73.296	Panthera_pardus
ENSIPUG00000015876	thoc2	99	71.580	ENSPTIG00000006983	THOC2	99	72.215	Panthera_tigris_altaica
ENSIPUG00000015876	thoc2	99	72.219	ENSPTRG00000022246	THOC2	99	73.233	Pan_troglodytes
ENSIPUG00000015876	thoc2	99	70.596	ENSPANG00000004038	THOC2	100	71.356	Papio_anubis
ENSIPUG00000015876	thoc2	99	81.147	ENSPKIG00000021719	thoc2	97	81.680	Paramormyrops_kingsleyae
ENSIPUG00000015876	thoc2	99	74.381	ENSPSIG00000015352	THOC2	98	75.309	Pelodiscus_sinensis
ENSIPUG00000015876	thoc2	98	76.006	ENSPMGG00000002688	thoc2	98	74.467	Periophthalmus_magnuspinnatus
ENSIPUG00000015876	thoc2	99	71.536	ENSPEMG00000011125	BC005561	99	71.016	Peromyscus_maniculatus_bairdii
ENSIPUG00000015876	thoc2	99	71.830	ENSPEMG00000007626	Thoc2	99	72.455	Peromyscus_maniculatus_bairdii
ENSIPUG00000015876	thoc2	99	63.807	ENSPMAG00000007219	-	99	72.832	Petromyzon_marinus
ENSIPUG00000015876	thoc2	66	84.152	ENSPCIG00000007574	THOC2	99	83.011	Phascolarctos_cinereus
ENSIPUG00000015876	thoc2	99	76.854	ENSPFOG00000019556	thoc2	99	76.328	Poecilia_formosa
ENSIPUG00000015876	thoc2	100	76.486	ENSPLAG00000005761	thoc2	100	75.974	Poecilia_latipinna
ENSIPUG00000015876	thoc2	100	76.339	ENSPMEG00000002951	thoc2	100	75.798	Poecilia_mexicana
ENSIPUG00000015876	thoc2	100	76.830	ENSPREG00000021746	thoc2	100	76.384	Poecilia_reticulata
ENSIPUG00000015876	thoc2	99	72.347	ENSPPYG00000020695	THOC2	99	73.233	Pongo_abelii
ENSIPUG00000015876	thoc2	99	61.389	ENSPCAG00000005402	THOC2	99	62.280	Procavia_capensis
ENSIPUG00000015876	thoc2	99	71.565	ENSPCOG00000001806	THOC2	99	70.962	Propithecus_coquereli
ENSIPUG00000015876	thoc2	99	71.997	ENSPVAG00000006132	THOC2	99	74.089	Pteropus_vampyrus
ENSIPUG00000015876	thoc2	98	78.675	ENSPNYG00000019622	thoc2	100	76.404	Pundamilia_nyererei
ENSIPUG00000015876	thoc2	100	86.555	ENSPNAG00000020593	thoc2	100	86.619	Pygocentrus_nattereri
ENSIPUG00000015876	thoc2	99	72.050	ENSRNOG00000007315	Thoc2	99	73.000	Rattus_norvegicus
ENSIPUG00000015876	thoc2	99	70.677	ENSRNOG00000042340	LOC679894	99	70.927	Rattus_norvegicus
ENSIPUG00000015876	thoc2	93	72.812	ENSRBIG00000044129	THOC2	99	74.487	Rhinopithecus_bieti
ENSIPUG00000015876	thoc2	99	72.934	ENSRROG00000041515	THOC2	99	73.233	Rhinopithecus_roxellana
ENSIPUG00000015876	thoc2	99	72.808	ENSSBOG00000007245	THOC2	99	73.171	Saimiri_boliviensis_boliviensis
ENSIPUG00000015876	thoc2	99	73.751	ENSSHAG00000015987	THOC2	100	73.814	Sarcophilus_harrisii
ENSIPUG00000015876	thoc2	100	81.310	ENSSFOG00015004767	THOC2	100	80.547	Scleropages_formosus
ENSIPUG00000015876	thoc2	100	80.420	ENSSFOG00015010127	thoc2	98	83.735	Scleropages_formosus
ENSIPUG00000015876	thoc2	100	77.079	ENSSMAG00000016574	thoc2	100	76.127	Scophthalmus_maximus
ENSIPUG00000015876	thoc2	100	77.841	ENSSDUG00000012815	thoc2	100	77.333	Seriola_dumerili
ENSIPUG00000015876	thoc2	100	77.778	ENSSLDG00000015816	thoc2	100	77.270	Seriola_lalandi_dorsalis
ENSIPUG00000015876	thoc2	95	80.259	ENSSARG00000005799	THOC2	92	78.744	Sorex_araneus
ENSIPUG00000015876	thoc2	99	73.821	ENSSPUG00000012889	THOC2	99	74.319	Sphenodon_punctatus
ENSIPUG00000015876	thoc2	91	81.690	ENSSPAG00000023593	thoc2	91	81.882	Stegastes_partitus
ENSIPUG00000015876	thoc2	99	73.242	ENSSSCG00000012639	THOC2	99	74.449	Sus_scrofa
ENSIPUG00000015876	thoc2	99	73.124	ENSTGUG00000003682	THOC2	99	76.511	Taeniopygia_guttata
ENSIPUG00000015876	thoc2	99	74.952	ENSTRUG00000015122	thoc2	99	73.499	Takifugu_rubripes
ENSIPUG00000015876	thoc2	99	76.005	ENSTNIG00000011794	thoc2	97	75.749	Tetraodon_nigroviridis
ENSIPUG00000015876	thoc2	82	71.613	ENSTBEG00000004420	-	100	70.299	Tupaia_belangeri
ENSIPUG00000015876	thoc2	58	84.298	ENSTBEG00000005854	-	55	84.298	Tupaia_belangeri
ENSIPUG00000015876	thoc2	89	89.011	ENSTTRG00000002762	THOC2	95	77.627	Tursiops_truncatus
ENSIPUG00000015876	thoc2	99	73.849	ENSUAMG00000008780	THOC2	99	77.660	Ursus_americanus
ENSIPUG00000015876	thoc2	99	70.322	ENSUMAG00000024014	THOC2	99	77.300	Ursus_maritimus
ENSIPUG00000015876	thoc2	99	72.860	ENSVPAG00000006247	THOC2	99	74.764	Vicugna_pacos
ENSIPUG00000015876	thoc2	99	72.984	ENSVVUG00000028282	THOC2	99	77.625	Vulpes_vulpes
ENSIPUG00000015876	thoc2	100	71.643	ENSXETG00000016195	thoc2	99	86.319	Xenopus_tropicalis
ENSIPUG00000015876	thoc2	99	76.162	ENSXCOG00000006301	thoc2	100	76.817	Xiphophorus_couchianus
ENSIPUG00000015876	thoc2	99	76.162	ENSXMAG00000011604	thoc2	100	76.868	Xiphophorus_maculatus