EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000016053 (Gene tree)
Gene ID: 108276724
Gene Symbol: snrnp35
Alias: zgc:112337
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 35
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 795 bases
Position: chr16:20251018-20251812
Accession: 108276724
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000023742	RRM_1	PF00076.22	9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000024754	-	795	XM_017488587	ENSIPUP00000023742	264 (aa)	XP_017344076	W5UFG6

Gene Model

Click here to download ENSIPUG00000016053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000016053's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000016053	snrnp35	65	74.269	ENSG00000184209	SNRNP35	70	74.269	Homo_sapiens
ENSIPUG00000016053	snrnp35	69	73.626	ENSAMEG00000019650	SNRNP35	72	73.626	Ailuropoda_melanoleuca
ENSIPUG00000016053	snrnp35	75	71.220	ENSACIG00000003238	snrnp35	85	76.087	Amphilophus_citrinellus
ENSIPUG00000016053	snrnp35	64	77.976	ENSAOCG00000007701	snrnp35	85	73.370	Amphiprion_ocellaris
ENSIPUG00000016053	snrnp35	76	68.421	ENSAPEG00000023725	snrnp35	85	74.725	Amphiprion_percula
ENSIPUG00000016053	snrnp35	64	77.976	ENSATEG00000021269	snrnp35	87	77.976	Anabas_testudineus
ENSIPUG00000016053	snrnp35	80	66.512	ENSAPLG00000015654	SNRNP35	70	77.193	Anas_platyrhynchos
ENSIPUG00000016053	snrnp35	64	76.471	ENSACAG00000015421	SNRNP35	65	76.471	Anolis_carolinensis
ENSIPUG00000016053	snrnp35	65	73.684	ENSANAG00000025109	SNRNP35	67	73.684	Aotus_nancymaae
ENSIPUG00000016053	snrnp35	64	80.357	ENSACLG00000020994	SNRNP35	94	69.953	Astatotilapia_calliptera
ENSIPUG00000016053	snrnp35	64	80.357	ENSACLG00000020890	snrnp35	94	69.953	Astatotilapia_calliptera
ENSIPUG00000016053	snrnp35	67	87.778	ENSAMXG00000026163	snrnp35	86	87.778	Astyanax_mexicanus
ENSIPUG00000016053	snrnp35	65	76.023	ENSBTAG00000008060	SNRNP35	73	73.077	Bos_taurus
ENSIPUG00000016053	snrnp35	65	73.099	ENSCJAG00000007131	SNRNP35	68	73.099	Callithrix_jacchus
ENSIPUG00000016053	snrnp35	64	76.923	ENSCAFG00000007484	SNRNP35	69	76.923	Canis_familiaris
ENSIPUG00000016053	snrnp35	64	76.923	ENSCAFG00020015272	-	69	76.923	Canis_lupus_dingo
ENSIPUG00000016053	snrnp35	65	76.023	ENSCHIG00000006364	SNRNP35	73	73.077	Capra_hircus
ENSIPUG00000016053	snrnp35	69	71.978	ENSTSYG00000034104	SNRNP35	72	71.978	Carlito_syrichta
ENSIPUG00000016053	snrnp35	91	60.630	ENSCPOG00000002548	SNRNP35	73	72.527	Cavia_porcellus
ENSIPUG00000016053	snrnp35	65	73.684	ENSCCAG00000001685	SNRNP35	68	73.684	Cebus_capucinus
ENSIPUG00000016053	snrnp35	65	74.269	ENSCATG00000021946	SNRNP35	69	74.269	Cercocebus_atys
ENSIPUG00000016053	snrnp35	65	74.269	ENSCLAG00000010232	SNRNP35	70	74.269	Chinchilla_lanigera
ENSIPUG00000016053	snrnp35	65	74.269	ENSCSAG00000018950	SNRNP35	70	74.269	Chlorocebus_sabaeus
ENSIPUG00000016053	snrnp35	65	77.193	ENSCHOG00000006263	SNRNP35	69	77.193	Choloepus_hoffmanni
ENSIPUG00000016053	snrnp35	80	67.907	ENSCPBG00000025965	SNRNP35	63	78.235	Chrysemys_picta_bellii
ENSIPUG00000016053	snrnp35	62	55.215	ENSCSAVG00000000748	-	92	55.215	Ciona_savignyi
ENSIPUG00000016053	snrnp35	65	74.269	ENSCANG00000025364	SNRNP35	68	74.269	Colobus_angolensis_palliatus
ENSIPUG00000016053	snrnp35	66	74.286	ENSCGRG00001012630	Snrnp35	71	74.286	Cricetulus_griseus_chok1gshd
ENSIPUG00000016053	snrnp35	66	74.286	ENSCGRG00000002063	Snrnp35	71	74.286	Cricetulus_griseus_crigri
ENSIPUG00000016053	snrnp35	65	76.608	ENSDARG00000099913	snrnp35	82	76.608	Danio_rerio
ENSIPUG00000016053	snrnp35	91	62.903	ENSDNOG00000038603	SNRNP35	70	76.608	Dasypus_novemcinctus
ENSIPUG00000016053	snrnp35	69	73.077	ENSDORG00000001859	Snrnp35	73	73.077	Dipodomys_ordii
ENSIPUG00000016053	snrnp35	64	59.412	ENSEBUG00000003535	snrnp35	64	59.412	Eptatretus_burgeri
ENSIPUG00000016053	snrnp35	65	76.608	ENSEASG00005012617	SNRNP35	70	76.608	Equus_asinus_asinus
ENSIPUG00000016053	snrnp35	65	76.608	ENSECAG00000006080	SNRNP35	70	76.608	Equus_caballus
ENSIPUG00000016053	snrnp35	69	73.077	ENSEEUG00000011544	SNRNP35	72	73.077	Erinaceus_europaeus
ENSIPUG00000016053	snrnp35	94	62.651	ENSELUG00000000071	snrnp35	71	80.233	Esox_lucius
ENSIPUG00000016053	snrnp35	65	77.193	ENSFCAG00000001159	SNRNP35	68	77.193	Felis_catus
ENSIPUG00000016053	snrnp35	92	62.097	ENSFALG00000014650	SNRNP35	70	77.059	Ficedula_albicollis
ENSIPUG00000016053	snrnp35	65	65.497	ENSFDAG00000018743	SNRNP35	68	64.327	Fukomys_damarensis
ENSIPUG00000016053	snrnp35	99	58.779	ENSGMOG00000002299	snrnp35	72	76.786	Gadus_morhua
ENSIPUG00000016053	snrnp35	89	63.713	ENSGALG00000003318	SNRNP35	65	77.193	Gallus_gallus
ENSIPUG00000016053	snrnp35	85	63.556	ENSGACG00000020631	snrnp35	100	60.769	Gasterosteus_aculeatus
ENSIPUG00000016053	snrnp35	65	74.269	ENSGGOG00000015936	SNRNP35	68	74.269	Gorilla_gorilla
ENSIPUG00000016053	snrnp35	81	68.075	ENSHBUG00000015853	snrnp35	93	69.953	Haplochromis_burtoni
ENSIPUG00000016053	snrnp35	82	60.996	ENSHGLG00000017961	SNRNP35	70	76.023	Heterocephalus_glaber_female
ENSIPUG00000016053	snrnp35	82	60.996	ENSHGLG00100019252	SNRNP35	70	76.023	Heterocephalus_glaber_male
ENSIPUG00000016053	snrnp35	65	73.684	ENSSTOG00000025145	SNRNP35	70	73.684	Ictidomys_tridecemlineatus
ENSIPUG00000016053	snrnp35	94	62.353	ENSJJAG00000013421	Snrnp35	72	71.892	Jaculus_jaculus
ENSIPUG00000016053	snrnp35	95	57.401	ENSLACG00000017176	SNRNP35	95	59.328	Latimeria_chalumnae
ENSIPUG00000016053	snrnp35	97	63.060	ENSLOCG00000018154	snrnp35	99	64.576	Lepisosteus_oculatus
ENSIPUG00000016053	snrnp35	65	76.608	ENSLAFG00000022302	SNRNP35	70	76.608	Loxodonta_africana
ENSIPUG00000016053	snrnp35	65	74.269	ENSMFAG00000008986	SNRNP35	69	74.269	Macaca_fascicularis
ENSIPUG00000016053	snrnp35	65	74.269	ENSMMUG00000008411	SNRNP35	69	74.269	Macaca_mulatta
ENSIPUG00000016053	snrnp35	65	74.269	ENSMNEG00000018139	SNRNP35	69	74.269	Macaca_nemestrina
ENSIPUG00000016053	snrnp35	65	74.269	ENSMLEG00000040998	SNRNP35	68	74.269	Mandrillus_leucophaeus
ENSIPUG00000016053	snrnp35	64	80.952	ENSMAMG00000018927	snrnp35	71	80.952	Mastacembelus_armatus
ENSIPUG00000016053	snrnp35	62	73.780	ENSMZEG00005018947	-	92	64.734	Maylandia_zebra
ENSIPUG00000016053	snrnp35	64	80.357	ENSMZEG00005018928	snrnp35	94	69.953	Maylandia_zebra
ENSIPUG00000016053	snrnp35	92	63.158	ENSMGAG00000003241	SNRNP35	71	77.193	Meleagris_gallopavo
ENSIPUG00000016053	snrnp35	66	74.286	ENSMAUG00000001690	Snrnp35	71	74.286	Mesocricetus_auratus
ENSIPUG00000016053	snrnp35	65	74.854	ENSMICG00000026512	SNRNP35	68	74.854	Microcebus_murinus
ENSIPUG00000016053	snrnp35	66	73.714	ENSMOCG00000000548	Snrnp35	71	73.714	Microtus_ochrogaster
ENSIPUG00000016053	snrnp35	100	57.197	ENSMMOG00000018779	snrnp35	73	75.581	Mola_mola
ENSIPUG00000016053	snrnp35	64	76.923	ENSMODG00000012481	SNRNP35	94	76.923	Monodelphis_domestica
ENSIPUG00000016053	snrnp35	66	74.286	MGP_CAROLIEiJ_G0027752	Snrnp35	100	71.074	Mus_caroli
ENSIPUG00000016053	snrnp35	66	74.857	ENSMUSG00000029402	Snrnp35	100	71.901	Mus_musculus
ENSIPUG00000016053	snrnp35	66	74.286	MGP_PahariEiJ_G0024332	Snrnp35	100	71.901	Mus_pahari
ENSIPUG00000016053	snrnp35	66	74.857	MGP_SPRETEiJ_G0028751	Snrnp35	100	71.901	Mus_spretus
ENSIPUG00000016053	snrnp35	69	73.626	ENSMPUG00000019392	SNRNP35	73	73.626	Mustela_putorius_furo
ENSIPUG00000016053	snrnp35	69	74.176	ENSMLUG00000025311	SNRNP35	73	74.176	Myotis_lucifugus
ENSIPUG00000016053	snrnp35	82	64.977	ENSNGAG00000010711	Snrnp35	97	61.066	Nannospalax_galili
ENSIPUG00000016053	snrnp35	65	74.269	ENSNLEG00000029859	SNRNP35	68	74.269	Nomascus_leucogenys
ENSIPUG00000016053	snrnp35	65	76.608	ENSOPRG00000011119	SNRNP35	70	76.608	Ochotona_princeps
ENSIPUG00000016053	snrnp35	65	74.269	ENSODEG00000019870	SNRNP35	70	74.269	Octodon_degus
ENSIPUG00000016053	snrnp35	100	60.985	ENSONIG00000021361	snrnp35	71	80.357	Oreochromis_niloticus
ENSIPUG00000016053	snrnp35	64	77.647	ENSOANG00000002697	SNRNP35	70	77.647	Ornithorhynchus_anatinus
ENSIPUG00000016053	snrnp35	92	63.265	ENSOCUG00000021248	SNRNP35	85	69.014	Oryctolagus_cuniculus
ENSIPUG00000016053	snrnp35	73	72.308	ENSORLG00000005673	snrnp35	83	75.978	Oryzias_latipes
ENSIPUG00000016053	snrnp35	73	73.333	ENSORLG00015014439	snrnp35	86	77.095	Oryzias_latipes_hsok
ENSIPUG00000016053	snrnp35	65	75.439	ENSOGAG00000011301	SNRNP35	70	75.439	Otolemur_garnettii
ENSIPUG00000016053	snrnp35	65	76.023	ENSOARG00000004583	SNRNP35	73	73.077	Ovis_aries
ENSIPUG00000016053	snrnp35	65	74.269	ENSPPAG00000000480	SNRNP35	68	74.269	Pan_paniscus
ENSIPUG00000016053	snrnp35	65	77.193	ENSPPRG00000013139	SNRNP35	67	78.107	Panthera_pardus
ENSIPUG00000016053	snrnp35	65	77.193	ENSPTIG00000015832	SNRNP35	67	78.107	Panthera_tigris_altaica
ENSIPUG00000016053	snrnp35	65	74.269	ENSPTRG00000023573	SNRNP35	68	74.269	Pan_troglodytes
ENSIPUG00000016053	snrnp35	65	74.269	ENSPANG00000019739	SNRNP35	68	74.269	Papio_anubis
ENSIPUG00000016053	snrnp35	64	79.290	ENSPKIG00000005221	snrnp35	81	79.290	Paramormyrops_kingsleyae
ENSIPUG00000016053	snrnp35	100	59.925	ENSPSIG00000000450	SNRNP35	100	58.484	Pelodiscus_sinensis
ENSIPUG00000016053	snrnp35	64	76.331	ENSPCIG00000010978	SNRNP35	64	76.331	Phascolarctos_cinereus
ENSIPUG00000016053	snrnp35	89	62.821	ENSPFOG00000019881	snrnp35	99	59.533	Poecilia_formosa
ENSIPUG00000016053	snrnp35	65	74.269	ENSPPYG00000005088	SNRNP35	68	74.269	Pongo_abelii
ENSIPUG00000016053	snrnp35	65	76.608	ENSPCAG00000011478	SNRNP35	70	76.608	Procavia_capensis
ENSIPUG00000016053	snrnp35	65	74.854	ENSPCOG00000009946	SNRNP35	69	74.854	Propithecus_coquereli
ENSIPUG00000016053	snrnp35	91	61.847	ENSPVAG00000015317	SNRNP35	72	73.626	Pteropus_vampyrus
ENSIPUG00000016053	snrnp35	100	78.947	ENSPNAG00000020589	snrnp35	100	77.528	Pygocentrus_nattereri
ENSIPUG00000016053	snrnp35	66	74.286	ENSRNOG00000001060	Snrnp35	72	74.286	Rattus_norvegicus
ENSIPUG00000016053	snrnp35	65	74.269	ENSRBIG00000043111	SNRNP35	68	74.269	Rhinopithecus_bieti
ENSIPUG00000016053	snrnp35	65	74.269	ENSRROG00000032878	SNRNP35	68	74.269	Rhinopithecus_roxellana
ENSIPUG00000016053	snrnp35	65	73.684	ENSSBOG00000012231	SNRNP35	68	73.684	Saimiri_boliviensis_boliviensis
ENSIPUG00000016053	snrnp35	80	65.581	ENSSHAG00000015558	-	69	75.148	Sarcophilus_harrisii
ENSIPUG00000016053	snrnp35	80	63.596	ENSSHAG00000001216	-	69	76.331	Sarcophilus_harrisii
ENSIPUG00000016053	snrnp35	64	81.176	ENSSFOG00015003785	snrnp35	91	81.176	Scleropages_formosus
ENSIPUG00000016053	snrnp35	65	76.744	ENSSLDG00000017209	snrnp35	93	67.136	Seriola_lalandi_dorsalis
ENSIPUG00000016053	snrnp35	65	75.439	ENSSARG00000012656	SNRNP35	70	76.331	Sorex_araneus
ENSIPUG00000016053	snrnp35	81	65.258	ENSSPUG00000012768	SNRNP35	64	74.556	Sphenodon_punctatus
ENSIPUG00000016053	snrnp35	81	68.545	ENSSPAG00000008207	snrnp35	92	68.075	Stegastes_partitus
ENSIPUG00000016053	snrnp35	91	63.710	ENSSSCG00000022212	SNRNP35	83	74.176	Sus_scrofa
ENSIPUG00000016053	snrnp35	80	66.047	ENSTGUG00000005364	-	71	77.059	Taeniopygia_guttata
ENSIPUG00000016053	snrnp35	80	66.047	ENSTGUG00000015471	-	64	77.059	Taeniopygia_guttata
ENSIPUG00000016053	snrnp35	64	79.167	ENSTNIG00000009984	snrnp35	95	61.905	Tetraodon_nigroviridis
ENSIPUG00000016053	snrnp35	65	74.854	ENSTBEG00000002309	SNRNP35	69	74.854	Tupaia_belangeri
ENSIPUG00000016053	snrnp35	91	61.811	ENSUAMG00000012611	SNRNP35	73	73.626	Ursus_americanus
ENSIPUG00000016053	snrnp35	69	73.626	ENSUMAG00000003914	SNRNP35	70	73.626	Ursus_maritimus
ENSIPUG00000016053	snrnp35	64	76.923	ENSVVUG00000027761	-	69	76.923	Vulpes_vulpes
ENSIPUG00000016053	snrnp35	67	76.243	ENSXMAG00000019885	snrnp35	92	66.239	Xiphophorus_maculatus