EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000016138 (Gene tree)
Gene ID: 108272789
Gene Symbol: nelfe
Alias: rdbp|zgc:92496
Full Name: negative elongation factor complex member E
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 23413 bases
Position: chr12:21767136-21790548
Accession: 108272789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000023912	RRM_1	PF00076.22	4.1e-10	1	1
ENSIPUP00000023967	RRM_1	PF00076.22	4.1e-10	1	1
ENSIPUP00000023933	RRM_1	PF00076.22	4.4e-10	1	1
ENSIPUP00000023948	RRM_1	PF00076.22	4.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000024963	-	1683	-	ENSIPUP00000023948	367 (aa)	-	-
ENSIPUT00000024926	-	5203	-	ENSIPUP00000023912	344 (aa)	-	-
ENSIPUT00000024947	-	3967	XM_017481525	ENSIPUP00000023933	358 (aa)	XP_017337014	A0A2D0S469
ENSIPUT00000024982	-	1005	-	ENSIPUP00000023967	334 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000016138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000016138's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000016138	nelfe	99	68.529	ENSG00000204356	NELFE	99	69.620	Homo_sapiens
ENSIPUG00000016138	nelfe	88	59.934	ENSCPBG00000000225	NELFE	50	67.808	Chrysemys_picta_bellii
ENSIPUG00000016138	nelfe	100	77.933	ENSDARG00000004343	nelfe	72	82.353	Danio_rerio
ENSIPUG00000016138	nelfe	99	46.499	ENSEBUG00000017070	nelfe	93	65.541	Eptatretus_burgeri
ENSIPUG00000016138	nelfe	78	84.615	ENSEEUG00000005004	NELFE	55	84.615	Erinaceus_europaeus
ENSIPUG00000016138	nelfe	100	57.382	ENSGALG00000045676	NELFE	90	69.466	Gallus_gallus
ENSIPUG00000016138	nelfe	72	68.182	ENSMGAG00000001297	NELFE	69	70.874	Meleagris_gallopavo
ENSIPUG00000016138	nelfe	99	58.036	ENSMODG00000015063	NELFE	89	68.939	Monodelphis_domestica
ENSIPUG00000016138	nelfe	100	78.249	ENSONIG00000013513	nelfe	99	78.249	Oreochromis_niloticus
ENSIPUG00000016138	nelfe	100	77.778	ENSPKIG00000012048	nelfe	80	84.967	Paramormyrops_kingsleyae
ENSIPUG00000016138	nelfe	100	76.558	ENSPLAG00000018174	nelfe	99	76.558	Poecilia_latipinna
ENSIPUG00000016138	nelfe	97	58.235	ENSRBIG00000028905	-	98	58.333	Rhinopithecus_bieti
ENSIPUG00000016138	nelfe	100	58.824	ENSXETG00000010931	nelfe	65	81.513	Xenopus_tropicalis