EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000016265 (Gene tree)
Gene ID: 108259583
Gene Symbol: SALL1
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 19657 bases
Position: chr27:3292245-3311901
Accession: 108259583
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000024071	zf-C2H2	PF00096.26	9.5e-35	1	6
ENSIPUP00000024071	zf-C2H2	PF00096.26	9.5e-35	2	6
ENSIPUP00000024071	zf-C2H2	PF00096.26	9.5e-35	3	6
ENSIPUP00000024071	zf-C2H2	PF00096.26	9.5e-35	4	6
ENSIPUP00000024071	zf-C2H2	PF00096.26	9.5e-35	5	6
ENSIPUP00000024071	zf-C2H2	PF00096.26	9.5e-35	6	6
ENSIPUP00000024078	zf-C2H2	PF00096.26	9.5e-35	1	6
ENSIPUP00000024078	zf-C2H2	PF00096.26	9.5e-35	2	6
ENSIPUP00000024078	zf-C2H2	PF00096.26	9.5e-35	3	6
ENSIPUP00000024078	zf-C2H2	PF00096.26	9.5e-35	4	6
ENSIPUP00000024078	zf-C2H2	PF00096.26	9.5e-35	5	6
ENSIPUP00000024078	zf-C2H2	PF00096.26	9.5e-35	6	6
ENSIPUP00000024071	zf-met	PF12874.7	4.3e-25	1	5
ENSIPUP00000024071	zf-met	PF12874.7	4.3e-25	2	5
ENSIPUP00000024071	zf-met	PF12874.7	4.3e-25	3	5
ENSIPUP00000024071	zf-met	PF12874.7	4.3e-25	4	5
ENSIPUP00000024071	zf-met	PF12874.7	4.3e-25	5	5
ENSIPUP00000024078	zf-met	PF12874.7	4.3e-25	1	5
ENSIPUP00000024078	zf-met	PF12874.7	4.3e-25	2	5
ENSIPUP00000024078	zf-met	PF12874.7	4.3e-25	3	5
ENSIPUP00000024078	zf-met	PF12874.7	4.3e-25	4	5
ENSIPUP00000024078	zf-met	PF12874.7	4.3e-25	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000025094	-	7277	-	ENSIPUP00000024078	1308 (aa)	-	W5UI42
ENSIPUT00000025084	-	7432	XM_017459181	ENSIPUP00000024071	1308 (aa)	XP_017314670	W5UI42

Gene Model

Click here to download ENSIPUG00000016265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000016265's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000016265	SALL1	99	50.302	ENSIPUG00000022928	sall1b	99	50.302
ENSIPUG00000016265	SALL1	96	63.462	ENSIPUG00000003006	sall3b	100	63.462
ENSIPUG00000016265	SALL1	94	65.385	ENSIPUG00000019170	sall4	99	65.385
ENSIPUG00000016265	SALL1	100	63.462	ENSIPUG00000003378	sall3	98	63.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000016265	SALL1	99	69.790	ENSG00000103449	SALL1	100	69.974	Homo_sapiens
ENSIPUG00000016265	SALL1	100	80.503	ENSAPOG00000022764	sall1a	100	80.579	Acanthochromis_polyacanthus
ENSIPUG00000016265	SALL1	99	67.689	ENSAMEG00000006817	SALL1	99	68.614	Ailuropoda_melanoleuca
ENSIPUG00000016265	SALL1	100	79.024	ENSACIG00000004231	sall1a	100	79.726	Amphilophus_citrinellus
ENSIPUG00000016265	SALL1	100	80.395	ENSAOCG00000002800	sall1a	100	80.471	Amphiprion_ocellaris
ENSIPUG00000016265	SALL1	100	80.167	ENSAPEG00000010179	sall1a	100	80.243	Amphiprion_percula
ENSIPUG00000016265	SALL1	99	79.192	ENSATEG00000003006	sall1a	99	80.115	Anabas_testudineus
ENSIPUG00000016265	SALL1	100	70.420	ENSAPLG00000003356	SALL1	100	70.571	Anas_platyrhynchos
ENSIPUG00000016265	SALL1	98	70.099	ENSACAG00000014399	SALL1	96	70.099	Anolis_carolinensis
ENSIPUG00000016265	SALL1	99	69.865	ENSANAG00000027238	SALL1	99	70.112	Aotus_nancymaae
ENSIPUG00000016265	SALL1	100	78.642	ENSACLG00000017148	sall1a	100	79.359	Astatotilapia_calliptera
ENSIPUG00000016265	SALL1	99	52.862	ENSAMXG00000017702	sall1b	99	53.146	Astyanax_mexicanus
ENSIPUG00000016265	SALL1	100	90.298	ENSAMXG00000018599	sall1a	100	90.298	Astyanax_mexicanus
ENSIPUG00000016265	SALL1	99	68.342	ENSBTAG00000008544	SALL1	99	69.242	Bos_taurus
ENSIPUG00000016265	SALL1	99	69.634	ENSCJAG00000001740	SALL1	99	70.000	Callithrix_jacchus
ENSIPUG00000016265	SALL1	99	68.464	ENSCAFG00000009755	SALL1	99	69.611	Canis_familiaris
ENSIPUG00000016265	SALL1	99	68.464	ENSCAFG00020002842	SALL1	99	69.611	Canis_lupus_dingo
ENSIPUG00000016265	SALL1	99	68.240	ENSCHIG00000026074	SALL1	100	68.881	Capra_hircus
ENSIPUG00000016265	SALL1	99	70.187	ENSTSYG00000029464	SALL1	99	70.187	Carlito_syrichta
ENSIPUG00000016265	SALL1	98	69.013	ENSCPOG00000006564	SALL1	99	69.472	Cavia_porcellus
ENSIPUG00000016265	SALL1	99	67.537	ENSCCAG00000001639	SALL1	99	68.212	Cebus_capucinus
ENSIPUG00000016265	SALL1	99	69.783	ENSCATG00000004982	SALL1	99	70.022	Cercocebus_atys
ENSIPUG00000016265	SALL1	99	69.369	ENSCLAG00000006380	SALL1	99	69.970	Chinchilla_lanigera
ENSIPUG00000016265	SALL1	99	69.185	ENSCSAG00000005319	SALL1	99	69.409	Chlorocebus_sabaeus
ENSIPUG00000016265	SALL1	63	67.451	ENSCHOG00000000800	-	69	67.451	Choloepus_hoffmanni
ENSIPUG00000016265	SALL1	100	70.871	ENSCPBG00000015924	SALL1	100	71.174	Chrysemys_picta_bellii
ENSIPUG00000016265	SALL1	99	69.790	ENSCANG00000036664	SALL1	99	70.331	Colobus_angolensis_palliatus
ENSIPUG00000016265	SALL1	99	67.515	ENSCGRG00001023314	-	99	68.563	Cricetulus_griseus_chok1gshd
ENSIPUG00000016265	SALL1	98	67.481	ENSCGRG00000009496	Sall1	99	68.550	Cricetulus_griseus_crigri
ENSIPUG00000016265	SALL1	99	77.778	ENSCSEG00000009349	sall1a	99	78.479	Cynoglossus_semilaevis
ENSIPUG00000016265	SALL1	90	77.397	ENSCVAG00000020513	sall1a	99	77.483	Cyprinodon_variegatus
ENSIPUG00000016265	SALL1	99	48.565	ENSDARG00000075891	sall1b	99	48.338	Danio_rerio
ENSIPUG00000016265	SALL1	100	83.270	ENSDARG00000074319	sall1a	100	83.270	Danio_rerio
ENSIPUG00000016265	SALL1	99	69.104	ENSDNOG00000016413	SALL1	99	69.955	Dasypus_novemcinctus
ENSIPUG00000016265	SALL1	98	69.166	ENSETEG00000015150	SALL1	99	69.625	Echinops_telfairi
ENSIPUG00000016265	SALL1	65	41.860	ENSEBUG00000008798	SALL1	94	35.909	Eptatretus_burgeri
ENSIPUG00000016265	SALL1	59	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSIPUG00000016265	SALL1	99	68.792	ENSEASG00005014602	SALL1	99	69.611	Equus_asinus_asinus
ENSIPUG00000016265	SALL1	90	67.246	ENSECAG00000011334	SALL1	99	67.822	Equus_caballus
ENSIPUG00000016265	SALL1	98	69.254	ENSEEUG00000002014	SALL1	99	69.787	Erinaceus_europaeus
ENSIPUG00000016265	SALL1	100	54.948	ENSELUG00000017774	-	100	54.566	Esox_lucius
ENSIPUG00000016265	SALL1	100	75.269	ENSELUG00000006159	sall1a	100	75.341	Esox_lucius
ENSIPUG00000016265	SALL1	99	67.440	ENSFCAG00000024654	SALL1	100	69.032	Felis_catus
ENSIPUG00000016265	SALL1	100	70.646	ENSFALG00000000074	SALL1	100	70.646	Ficedula_albicollis
ENSIPUG00000016265	SALL1	100	78.599	ENSFHEG00000012579	sall1a	100	79.300	Fundulus_heteroclitus
ENSIPUG00000016265	SALL1	74	64.103	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSIPUG00000016265	SALL1	100	77.180	ENSGMOG00000006103	sall1a	100	77.180	Gadus_morhua
ENSIPUG00000016265	SALL1	89	60.000	ENSGMOG00000013383	-	99	41.168	Gadus_morhua
ENSIPUG00000016265	SALL1	100	70.248	ENSGALG00000039238	SALL1	100	70.323	Gallus_gallus
ENSIPUG00000016265	SALL1	100	78.479	ENSGAFG00000009964	sall1a	100	79.255	Gambusia_affinis
ENSIPUG00000016265	SALL1	99	77.896	ENSGACG00000016702	sall1a	99	78.675	Gasterosteus_aculeatus
ENSIPUG00000016265	SALL1	100	70.871	ENSGAGG00000013979	SALL1	100	71.174	Gopherus_agassizii
ENSIPUG00000016265	SALL1	99	69.708	ENSGGOG00000000663	SALL1	99	69.933	Gorilla_gorilla
ENSIPUG00000016265	SALL1	100	78.719	ENSHBUG00000022005	sall1a	100	79.441	Haplochromis_burtoni
ENSIPUG00000016265	SALL1	99	69.294	ENSHGLG00000004288	-	99	70.270	Heterocephalus_glaber_female
ENSIPUG00000016265	SALL1	99	69.294	ENSHGLG00100017496	SALL1	99	70.270	Heterocephalus_glaber_male
ENSIPUG00000016265	SALL1	100	74.906	ENSHCOG00000000974	sall1a	100	75.680	Hippocampus_comes
ENSIPUG00000016265	SALL1	99	68.503	ENSSTOG00000020885	SALL1	99	69.305	Ictidomys_tridecemlineatus
ENSIPUG00000016265	SALL1	100	78.751	ENSKMAG00000016681	sall1a	100	79.452	Kryptolebias_marmoratus
ENSIPUG00000016265	SALL1	98	77.174	ENSLBEG00000012207	sall1a	96	78.183	Labrus_bergylta
ENSIPUG00000016265	SALL1	100	69.046	ENSLACG00000003556	SALL1	100	69.115	Latimeria_chalumnae
ENSIPUG00000016265	SALL1	92	39.692	ENSLACG00000014018	-	93	39.886	Latimeria_chalumnae
ENSIPUG00000016265	SALL1	100	76.435	ENSLOCG00000007283	sall1b	100	76.546	Lepisosteus_oculatus
ENSIPUG00000016265	SALL1	98	69.307	ENSLAFG00000015251	SALL1	99	69.681	Loxodonta_africana
ENSIPUG00000016265	SALL1	99	69.708	ENSMFAG00000003298	SALL1	99	70.052	Macaca_fascicularis
ENSIPUG00000016265	SALL1	93	69.597	ENSMMUG00000017200	SALL1	99	69.968	Macaca_mulatta
ENSIPUG00000016265	SALL1	93	69.839	ENSMNEG00000034770	SALL1	99	69.839	Macaca_nemestrina
ENSIPUG00000016265	SALL1	99	69.708	ENSMLEG00000036406	SALL1	99	70.232	Mandrillus_leucophaeus
ENSIPUG00000016265	SALL1	99	79.893	ENSMAMG00000004164	sall1a	99	80.870	Mastacembelus_armatus
ENSIPUG00000016265	SALL1	100	78.642	ENSMZEG00005006479	sall1a	100	79.359	Maylandia_zebra
ENSIPUG00000016265	SALL1	98	70.291	ENSMGAG00000004704	SALL1	100	70.368	Meleagris_gallopavo
ENSIPUG00000016265	SALL1	99	67.091	ENSMAUG00000019093	Sall1	99	67.889	Mesocricetus_auratus
ENSIPUG00000016265	SALL1	99	69.311	ENSMICG00000036486	SALL1	100	69.484	Microcebus_murinus
ENSIPUG00000016265	SALL1	99	79.221	ENSMMOG00000016400	sall1a	99	80.000	Mola_mola
ENSIPUG00000016265	SALL1	99	70.443	ENSMODG00000013114	SALL1	99	70.593	Monodelphis_domestica
ENSIPUG00000016265	SALL1	99	79.726	ENSMALG00000013400	sall1a	99	80.350	Monopterus_albus
ENSIPUG00000016265	SALL1	99	67.191	MGP_CAROLIEiJ_G0031362	Sall1	99	67.961	Mus_caroli
ENSIPUG00000016265	SALL1	99	66.891	ENSMUSG00000031665	Sall1	99	67.761	Mus_musculus
ENSIPUG00000016265	SALL1	99	67.015	MGP_PahariEiJ_G0022961	Sall1	99	67.461	Mus_pahari
ENSIPUG00000016265	SALL1	99	66.966	MGP_SPRETEiJ_G0032480	Sall1	99	67.836	Mus_spretus
ENSIPUG00000016265	SALL1	98	67.683	ENSMPUG00000003265	SALL1	96	68.745	Mustela_putorius_furo
ENSIPUG00000016265	SALL1	97	67.100	ENSMLUG00000015541	SALL1	99	68.165	Myotis_lucifugus
ENSIPUG00000016265	SALL1	100	78.719	ENSNBRG00000009307	sall1a	100	79.441	Neolamprologus_brichardi
ENSIPUG00000016265	SALL1	93	78.238	ENSNLEG00000001008	SALL1	99	78.238	Nomascus_leucogenys
ENSIPUG00000016265	SALL1	99	70.420	ENSMEUG00000012206	SALL1	99	70.420	Notamacropus_eugenii
ENSIPUG00000016265	SALL1	93	72.159	ENSOPRG00000005645	SALL1	73	73.011	Ochotona_princeps
ENSIPUG00000016265	SALL1	99	69.317	ENSODEG00000003685	SALL1	99	69.767	Octodon_degus
ENSIPUG00000016265	SALL1	100	79.100	ENSONIG00000002831	sall1a	100	79.802	Oreochromis_niloticus
ENSIPUG00000016265	SALL1	99	64.339	ENSOANG00000013399	SALL1	99	65.185	Ornithorhynchus_anatinus
ENSIPUG00000016265	SALL1	100	78.370	ENSORLG00000013827	sall1a	100	79.597	Oryzias_latipes
ENSIPUG00000016265	SALL1	100	78.919	ENSORLG00020020570	sall1a	100	78.995	Oryzias_latipes_hni
ENSIPUG00000016265	SALL1	100	78.370	ENSORLG00015018830	sall1a	100	79.681	Oryzias_latipes_hsok
ENSIPUG00000016265	SALL1	100	78.919	ENSOMEG00000016043	sall1a	100	79.310	Oryzias_melastigma
ENSIPUG00000016265	SALL1	99	69.985	ENSOGAG00000027316	SALL1	99	69.866	Otolemur_garnettii
ENSIPUG00000016265	SALL1	99	64.521	ENSOARG00000017583	SALL1	100	64.736	Ovis_aries
ENSIPUG00000016265	SALL1	97	51.820	ENSPPAG00000035136	-	98	52.786	Pan_paniscus
ENSIPUG00000016265	SALL1	98	70.260	ENSPPAG00000035657	SALL1	99	70.747	Pan_paniscus
ENSIPUG00000016265	SALL1	99	67.290	ENSPPRG00000023283	SALL1	100	68.871	Panthera_pardus
ENSIPUG00000016265	SALL1	87	75.000	ENSPTIG00000013539	-	94	57.918	Panthera_tigris_altaica
ENSIPUG00000016265	SALL1	99	70.060	ENSPTRG00000008108	SALL1	99	70.434	Pan_troglodytes
ENSIPUG00000016265	SALL1	96	51.654	ENSPTRG00000045256	-	97	52.677	Pan_troglodytes
ENSIPUG00000016265	SALL1	99	69.634	ENSPANG00000024176	SALL1	99	70.157	Papio_anubis
ENSIPUG00000016265	SALL1	100	72.453	ENSPKIG00000022251	sall1a	100	73.057	Paramormyrops_kingsleyae
ENSIPUG00000016265	SALL1	100	70.181	ENSPKIG00000005383	-	100	70.508	Paramormyrops_kingsleyae
ENSIPUG00000016265	SALL1	100	70.946	ENSPSIG00000008582	SALL1	100	71.096	Pelodiscus_sinensis
ENSIPUG00000016265	SALL1	99	75.357	ENSPMGG00000021788	sall1a	99	75.357	Periophthalmus_magnuspinnatus
ENSIPUG00000016265	SALL1	99	70.420	ENSPCIG00000017840	SALL1	99	70.420	Phascolarctos_cinereus
ENSIPUG00000016265	SALL1	98	78.809	ENSPFOG00000015799	sall1a	96	79.521	Poecilia_formosa
ENSIPUG00000016265	SALL1	100	78.707	ENSPLAG00000022539	sall1a	100	79.407	Poecilia_latipinna
ENSIPUG00000016265	SALL1	100	78.935	ENSPMEG00000020894	sall1a	100	79.635	Poecilia_mexicana
ENSIPUG00000016265	SALL1	100	78.859	ENSPREG00000006802	sall1a	100	79.559	Poecilia_reticulata
ENSIPUG00000016265	SALL1	90	69.134	ENSPPYG00000007345	SALL1	96	69.580	Pongo_abelii
ENSIPUG00000016265	SALL1	84	70.882	ENSPCAG00000008162	SALL1	93	70.882	Procavia_capensis
ENSIPUG00000016265	SALL1	99	69.438	ENSPCOG00000028192	SALL1	99	69.581	Propithecus_coquereli
ENSIPUG00000016265	SALL1	66	71.611	ENSPVAG00000015374	SALL1	100	71.346	Pteropus_vampyrus
ENSIPUG00000016265	SALL1	100	78.719	ENSPNYG00000010865	sall1a	100	79.441	Pundamilia_nyererei
ENSIPUG00000016265	SALL1	99	54.716	ENSPNAG00000007442	sall1b	99	54.966	Pygocentrus_nattereri
ENSIPUG00000016265	SALL1	100	89.084	ENSPNAG00000023644	sall1a	100	89.084	Pygocentrus_nattereri
ENSIPUG00000016265	SALL1	71	65.306	ENSPNAG00000028248	-	99	65.306	Pygocentrus_nattereri
ENSIPUG00000016265	SALL1	99	68.267	ENSRNOG00000013907	Sall1	99	68.516	Rattus_norvegicus
ENSIPUG00000016265	SALL1	93	69.839	ENSRBIG00000015707	SALL1	99	70.081	Rhinopithecus_bieti
ENSIPUG00000016265	SALL1	97	70.123	ENSRROG00000035777	SALL1	99	70.530	Rhinopithecus_roxellana
ENSIPUG00000016265	SALL1	99	69.783	ENSSBOG00000032186	SALL1	99	70.082	Saimiri_boliviensis_boliviensis
ENSIPUG00000016265	SALL1	99	69.872	ENSSHAG00000009477	SALL1	99	69.872	Sarcophilus_harrisii
ENSIPUG00000016265	SALL1	98	72.034	ENSSFOG00015001590	sall1a	99	72.329	Scleropages_formosus
ENSIPUG00000016265	SALL1	100	72.570	ENSSFOG00015020020	sall1a	100	72.720	Scleropages_formosus
ENSIPUG00000016265	SALL1	99	78.887	ENSSMAG00000009160	sall1a	99	79.665	Scophthalmus_maximus
ENSIPUG00000016265	SALL1	99	80.564	ENSSDUG00000006507	sall1a	99	81.594	Seriola_dumerili
ENSIPUG00000016265	SALL1	90	59.184	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSIPUG00000016265	SALL1	99	80.488	ENSSLDG00000017721	sall1a	99	81.264	Seriola_lalandi_dorsalis
ENSIPUG00000016265	SALL1	97	68.171	ENSSARG00000000661	SALL1	99	69.549	Sorex_araneus
ENSIPUG00000016265	SALL1	100	70.195	ENSSPUG00000000156	SALL1	100	70.345	Sphenodon_punctatus
ENSIPUG00000016265	SALL1	100	80.258	ENSSPAG00000021615	sall1a	100	80.334	Stegastes_partitus
ENSIPUG00000016265	SALL1	99	68.488	ENSSSCG00000002836	SALL1	99	69.081	Sus_scrofa
ENSIPUG00000016265	SALL1	100	70.571	ENSTGUG00000007514	SALL1	100	70.571	Taeniopygia_guttata
ENSIPUG00000016265	SALL1	91	77.398	ENSTRUG00000008950	sall1a	100	77.398	Takifugu_rubripes
ENSIPUG00000016265	SALL1	92	76.661	ENSTNIG00000004257	sall1a	100	77.427	Tetraodon_nigroviridis
ENSIPUG00000016265	SALL1	61	73.973	ENSTBEG00000002119	-	53	78.082	Tupaia_belangeri
ENSIPUG00000016265	SALL1	90	67.534	ENSUAMG00000023379	-	92	67.809	Ursus_americanus
ENSIPUG00000016265	SALL1	90	67.699	ENSVVUG00000019383	-	99	68.372	Vulpes_vulpes
ENSIPUG00000016265	SALL1	100	64.861	ENSXETG00000018417	sall1	100	65.033	Xenopus_tropicalis
ENSIPUG00000016265	SALL1	97	34.966	ENSXETG00000017176	sall2	99	34.889	Xenopus_tropicalis
ENSIPUG00000016265	SALL1	100	78.631	ENSXMAG00000016273	sall1a	100	79.590	Xiphophorus_maculatus