EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSIPUG00000016288 (Gene tree)
Gene ID
100528825
Gene Symbol
rpf2
Alias
bxdc1
Full Name
ribosome production factor 2 homolog
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Plus strand
Length
3595 bases
Position
chr2:36937036-36940630
Accession
100528825
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000024242BrixPF04427.183.7e-3611
ENSIPUP00000024210BrixPF04427.186.2e-3611
ENSIPUP00000024224BrixPF04427.181.4e-3511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000025246-861-ENSIPUP00000024224286 (aa)--
ENSIPUT00000025231-921-ENSIPUP00000024210306 (aa)--
ENSIPUT00000025264-738-ENSIPUP00000024242245 (aa)--
Gene Model
Click here to download ENSIPUG00000016288's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000016288's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000016288rpf29674.869ENSG00000197498RPF29864.762Homo_sapiens
ENSIPUG00000016288rpf29968.506ENSAPOG00000005714rpf29968.627Acanthochromis_polyacanthus
ENSIPUG00000016288rpf29765.217ENSAMEG00000015753RPF29565.979Ailuropoda_melanoleuca
ENSIPUG00000016288rpf29968.182ENSAOCG00000005173rpf29968.301Amphiprion_ocellaris
ENSIPUG00000016288rpf29968.182ENSAPEG00000004003rpf29968.301Amphiprion_percula
ENSIPUG00000016288rpf29968.078ENSATEG00000012818rpf29968.078Anabas_testudineus
ENSIPUG00000016288rpf28967.033ENSAPLG00000008812RPF210067.399Anas_platyrhynchos
ENSIPUG00000016288rpf29375.393ENSACAG00000011270RPF29465.753Anolis_carolinensis
ENSIPUG00000016288rpf28859.193ENSANAG00000033736-8960.800Aotus_nancymaae
ENSIPUG00000016288rpf29259.756ENSANAG00000021067-9359.756Aotus_nancymaae
ENSIPUG00000016288rpf29150.896ENSANAG00000025459-8950.896Aotus_nancymaae
ENSIPUG00000016288rpf29668.063ENSANAG00000026549-9467.442Aotus_nancymaae
ENSIPUG00000016288rpf29761.204ENSANAG00000034834-9561.856Aotus_nancymaae
ENSIPUG00000016288rpf210072.403ENSAMXG00000035201rpf210072.727Astyanax_mexicanus
ENSIPUG00000016288rpf29374.346ENSBTAG00000016584RPF29468.421Bos_taurus
ENSIPUG00000016288rpf29137.722WBGene00021830Y54E10A.109537.722Caenorhabditis_elegans
ENSIPUG00000016288rpf29674.869ENSCJAG00000038330RPF29371.429Callithrix_jacchus
ENSIPUG00000016288rpf29674.346ENSCAFG00000003918RPF29666.225Canis_familiaris
ENSIPUG00000016288rpf29368.421ENSCHIG00000022499RPF29468.421Capra_hircus
ENSIPUG00000016288rpf29274.869ENSTSYG00000013924RPF29371.429Carlito_syrichta
ENSIPUG00000016288rpf29753.378ENSCAPG00000014257RPF29553.378Cavia_aperea
ENSIPUG00000016288rpf28795.238ENSCPOG00000006797RPF29665.886Cavia_porcellus
ENSIPUG00000016288rpf29674.346ENSCCAG00000030864-9371.429Cebus_capucinus
ENSIPUG00000016288rpf29673.298ENSCCAG00000030365-9664.883Cebus_capucinus
ENSIPUG00000016288rpf28554.962ENSCCAG00000028906-9754.741Cebus_capucinus
ENSIPUG00000016288rpf29060.853ENSCCAG00000028553-9160.853Cebus_capucinus
ENSIPUG00000016288rpf28552.453ENSCATG00000029725-9753.008Cercocebus_atys
ENSIPUG00000016288rpf29665.863ENSCATG00000034352-9565.863Cercocebus_atys
ENSIPUG00000016288rpf28644.906ENSCLAG00000013252-9645.283Chinchilla_lanigera
ENSIPUG00000016288rpf29184.000ENSCLAG00000010874-9284.000Chinchilla_lanigera
ENSIPUG00000016288rpf28795.238ENSCLAG00000010393-9665.552Chinchilla_lanigera
ENSIPUG00000016288rpf28978.571ENSCHOG00000005865RPF29261.972Choloepus_hoffmanni
ENSIPUG00000016288rpf29767.333ENSCPBG00000006504RPF29867.667Chrysemys_picta_bellii
ENSIPUG00000016288rpf29352.098ENSCING00000008090-9352.098Ciona_intestinalis
ENSIPUG00000016288rpf29252.465ENSCSAVG00000010672-9552.817Ciona_savignyi
ENSIPUG00000016288rpf29674.869ENSCANG00000030665RPF29666.555Colobus_angolensis_palliatus
ENSIPUG00000016288rpf29673.298ENSCGRG00001007331-9664.214Cricetulus_griseus_chok1gshd
ENSIPUG00000016288rpf29354.804ENSCGRG00001005262-9254.804Cricetulus_griseus_chok1gshd
ENSIPUG00000016288rpf29772.165ENSCGRG00000006083Rpf29564.310Cricetulus_griseus_crigri
ENSIPUG00000016288rpf29568.707ENSCSEG00000015725rpf29668.836Cynoglossus_semilaevis
ENSIPUG00000016288rpf29970.358ENSCVAG00000001072rpf29970.358Cyprinodon_variegatus
ENSIPUG00000016288rpf29482.723ENSDARG00000043960rpf29869.205Danio_rerio
ENSIPUG00000016288rpf25182.143ENSDNOG00000039270RPF28982.143Dasypus_novemcinctus
ENSIPUG00000016288rpf25472.973ENSDORG00000026915Rpf29672.973Dipodomys_ordii
ENSIPUG00000016288rpf29139.858FBgn0038585Non38839.858Drosophila_melanogaster
ENSIPUG00000016288rpf29151.601ENSEBUG00000003640rpf28551.601Eptatretus_burgeri
ENSIPUG00000016288rpf29271.429ENSEASG00005006927-9665.116Equus_asinus_asinus
ENSIPUG00000016288rpf29274.869ENSECAG00000017121RPF29866.221Equus_caballus
ENSIPUG00000016288rpf29665.116ENSEEUG00000006169RPF29950.505Erinaceus_europaeus
ENSIPUG00000016288rpf29767.657ENSELUG00000018518rpf29967.987Esox_lucius
ENSIPUG00000016288rpf29673.822ENSFCAG00000001527RPF29666.221Felis_catus
ENSIPUG00000016288rpf29766.333ENSFALG00000010816RPF29866.667Ficedula_albicollis
ENSIPUG00000016288rpf28795.238ENSFDAG00000005811-9765.217Fukomys_damarensis
ENSIPUG00000016288rpf28653.558ENSFDAG00000016721-9853.933Fukomys_damarensis
ENSIPUG00000016288rpf29969.256ENSFHEG00000011243rpf29969.381Fundulus_heteroclitus
ENSIPUG00000016288rpf29458.966ENSGMOG00000002521rpf29758.966Gadus_morhua
ENSIPUG00000016288rpf29767.000ENSGALG00000037087RPF29867.333Gallus_gallus
ENSIPUG00000016288rpf29969.579ENSGAFG00000009537rpf29969.707Gambusia_affinis
ENSIPUG00000016288rpf29966.774ENSGACG00000006507rpf29966.774Gasterosteus_aculeatus
ENSIPUG00000016288rpf29762.667ENSGAGG00000016221RPF29863.333Gopherus_agassizii
ENSIPUG00000016288rpf29467.658ENSGGOG00000001469RPF29369.583Gorilla_gorilla
ENSIPUG00000016288rpf29161.071ENSGGOG00000024187-9861.429Gorilla_gorilla
ENSIPUG00000016288rpf29967.961ENSHBUG00000021805rpf29968.078Haplochromis_burtoni
ENSIPUG00000016288rpf28575.000ENSHGLG00000012500-7561.372Heterocephalus_glaber_female
ENSIPUG00000016288rpf28795.238ENSHGLG00000001322RPF29565.979Heterocephalus_glaber_female
ENSIPUG00000016288rpf28880.000ENSHGLG00000012697-9860.638Heterocephalus_glaber_female
ENSIPUG00000016288rpf28850.554ENSHGLG00100009310-9852.439Heterocephalus_glaber_male
ENSIPUG00000016288rpf28795.238ENSHGLG00100012131RPF29565.979Heterocephalus_glaber_male
ENSIPUG00000016288rpf28575.000ENSHGLG00100012473-9161.011Heterocephalus_glaber_male
ENSIPUG00000016288rpf29152.857ENSHGLG00100002981-9853.214Heterocephalus_glaber_male
ENSIPUG00000016288rpf28880.000ENSHGLG00100000462-9860.638Heterocephalus_glaber_male
ENSIPUG00000016288rpf29969.805ENSHCOG00000000225rpf29969.935Hippocampus_comes
ENSIPUG00000016288rpf29750.167ENSSTOG00000013114RPF29650.502Ictidomys_tridecemlineatus
ENSIPUG00000016288rpf28795.238ENSJJAG00000009092Rpf29182.143Jaculus_jaculus
ENSIPUG00000016288rpf210070.323ENSKMAG00000014609rpf210070.455Kryptolebias_marmoratus
ENSIPUG00000016288rpf29968.525ENSLBEG00000011907rpf29960.131Labrus_bergylta
ENSIPUG00000016288rpf29964.725ENSLACG00000003942RPF210065.049Latimeria_chalumnae
ENSIPUG00000016288rpf29868.197ENSLOCG00000016992rpf29968.197Lepisosteus_oculatus
ENSIPUG00000016288rpf29374.869ENSLAFG00000018219RPF29666.441Loxodonta_africana
ENSIPUG00000016288rpf29674.869ENSMFAG00000000417RPF29666.555Macaca_fascicularis
ENSIPUG00000016288rpf28550.000ENSMFAG00000036119-9750.376Macaca_fascicularis
ENSIPUG00000016288rpf29675.000ENSMMUG00000021532RPF29471.429Macaca_mulatta
ENSIPUG00000016288rpf29749.671ENSMMUG00000042376-9750.000Macaca_mulatta
ENSIPUG00000016288rpf29669.355ENSMNEG00000031683RPF29569.355Macaca_nemestrina
ENSIPUG00000016288rpf29751.505ENSMLEG00000042472-9751.839Mandrillus_leucophaeus
ENSIPUG00000016288rpf29968.608ENSMAMG00000004267rpf29968.730Mastacembelus_armatus
ENSIPUG00000016288rpf29967.961ENSMZEG00005015632rpf29968.078Maylandia_zebra
ENSIPUG00000016288rpf29766.667ENSMGAG00000013429RPF29867.000Meleagris_gallopavo
ENSIPUG00000016288rpf25969.643ENSMAUG00000005049Rpf210069.643Mesocricetus_auratus
ENSIPUG00000016288rpf29455.137ENSMICG00000028979-9555.479Microcebus_murinus
ENSIPUG00000016288rpf29273.822ENSMICG00000032086-9371.429Microcebus_murinus
ENSIPUG00000016288rpf29457.732ENSMICG00000038169-9558.076Microcebus_murinus
ENSIPUG00000016288rpf29172.775ENSMOCG00000005634Rpf29364.111Microtus_ochrogaster
ENSIPUG00000016288rpf29761.056ENSMMOG00000014844rpf29960.870Mola_mola
ENSIPUG00000016288rpf29672.959ENSMODG00000017919RPF29764.626Monodelphis_domestica
ENSIPUG00000016288rpf29282.199ENSMALG00000019046rpf29671.044Monopterus_albus
ENSIPUG00000016288rpf29174.346MGP_CAROLIEiJ_G0015254Rpf29567.391Mus_caroli
ENSIPUG00000016288rpf29673.298ENSMUSG00000038510Rpf29567.391Mus_musculus
ENSIPUG00000016288rpf29173.822MGP_PahariEiJ_G0030671Rpf29567.391Mus_pahari
ENSIPUG00000016288rpf29673.822MGP_SPRETEiJ_G0016063Rpf29567.391Mus_spretus
ENSIPUG00000016288rpf29674.346ENSMPUG00000010183RPF28466.221Mustela_putorius_furo
ENSIPUG00000016288rpf27476.871ENSMLUG00000005676RPF29571.429Myotis_lucifugus
ENSIPUG00000016288rpf29673.822ENSNGAG00000009701Rpf29664.214Nannospalax_galili
ENSIPUG00000016288rpf29968.608ENSNBRG00000011087rpf29968.730Neolamprologus_brichardi
ENSIPUG00000016288rpf27672.581ENSNLEG00000011848-9663.362Nomascus_leucogenys
ENSIPUG00000016288rpf29674.346ENSNLEG00000027819RPF29665.552Nomascus_leucogenys
ENSIPUG00000016288rpf27870.000ENSNLEG00000033597-8561.538Nomascus_leucogenys
ENSIPUG00000016288rpf29076.667ENSMEUG00000006421RPF27476.667Notamacropus_eugenii
ENSIPUG00000016288rpf28975.000ENSODEG00000019144-9363.732Octodon_degus
ENSIPUG00000016288rpf28659.160ENSODEG00000002442-9259.542Octodon_degus
ENSIPUG00000016288rpf29756.856ENSODEG00000006584-9657.143Octodon_degus
ENSIPUG00000016288rpf28953.455ENSODEG00000003531-10053.818Octodon_degus
ENSIPUG00000016288rpf28795.238ENSODEG00000013529-9267.021Octodon_degus
ENSIPUG00000016288rpf28654.887ENSODEG00000006939-9654.924Octodon_degus
ENSIPUG00000016288rpf29968.608ENSONIG00000011383rpf29968.730Oreochromis_niloticus
ENSIPUG00000016288rpf29273.822ENSOCUG00000016028RPF29371.429Oryctolagus_cuniculus
ENSIPUG00000016288rpf29968.285ENSORLG00000015183rpf29968.404Oryzias_latipes
ENSIPUG00000016288rpf29968.285ENSORLG00020008756rpf29665.552Oryzias_latipes_hni
ENSIPUG00000016288rpf29968.285ENSORLG00015003841RPF29968.404Oryzias_latipes_hsok
ENSIPUG00000016288rpf29969.579ENSOMEG00000011508rpf29969.707Oryzias_melastigma
ENSIPUG00000016288rpf29673.298ENSOGAG00000007438RPF29664.883Otolemur_garnettii
ENSIPUG00000016288rpf29374.346ENSOARG00000015548-9468.421Ovis_aries
ENSIPUG00000016288rpf29374.346ENSOARG00000009886-9468.421Ovis_aries
ENSIPUG00000016288rpf28960.806ENSPPAG00000032089-9861.172Pan_paniscus
ENSIPUG00000016288rpf29674.869ENSPPAG00000035622RPF29666.555Pan_paniscus
ENSIPUG00000016288rpf29263.043ENSPPRG00000008363-9455.017Panthera_pardus
ENSIPUG00000016288rpf29673.822ENSPPRG00000000320-9371.429Panthera_pardus
ENSIPUG00000016288rpf29673.822ENSPTIG00000002060RPF29371.429Panthera_tigris_altaica
ENSIPUG00000016288rpf29674.869ENSPTRG00000018503RPF29666.555Pan_troglodytes
ENSIPUG00000016288rpf29674.869ENSPANG00000018834RPF29666.555Papio_anubis
ENSIPUG00000016288rpf29969.055ENSPKIG00000019506rpf210069.055Paramormyrops_kingsleyae
ENSIPUG00000016288rpf29767.333ENSPSIG00000014887RPF29867.667Pelodiscus_sinensis
ENSIPUG00000016288rpf29058.484ENSPEMG00000011413Rpf29858.484Peromyscus_maniculatus_bairdii
ENSIPUG00000016288rpf28982.143ENSPCIG00000028172RPF29862.951Phascolarctos_cinereus
ENSIPUG00000016288rpf29969.903ENSPFOG00000003396rpf29970.033Poecilia_formosa
ENSIPUG00000016288rpf29969.256ENSPLAG00000001226rpf29969.381Poecilia_latipinna
ENSIPUG00000016288rpf29969.903ENSPMEG00000007781rpf29970.033Poecilia_mexicana
ENSIPUG00000016288rpf29969.055ENSPREG00000020525rpf29969.381Poecilia_reticulata
ENSIPUG00000016288rpf29674.869ENSPPYG00000016925RPF29666.555Pongo_abelii
ENSIPUG00000016288rpf26074.150ENSPCAG00000002562RPF27564.865Procavia_capensis
ENSIPUG00000016288rpf29452.595ENSPCOG00000012785RPF29355.197Propithecus_coquereli
ENSIPUG00000016288rpf27476.190ENSPVAG00000003446RPF27971.429Pteropus_vampyrus
ENSIPUG00000016288rpf29772.937ENSPNAG00000000082rpf29873.333Pygocentrus_nattereri
ENSIPUG00000016288rpf29173.822ENSRNOG00000000587Rpf29465.278Rattus_norvegicus
ENSIPUG00000016288rpf29175.000ENSRBIG00000038389RPF29275.000Rhinopithecus_bieti
ENSIPUG00000016288rpf29273.822ENSRROG00000036457RPF29371.429Rhinopithecus_roxellana
ENSIPUG00000016288rpf27871.728ENSRROG00000036685-9064.135Rhinopithecus_roxellana
ENSIPUG00000016288rpf27866.495ENSRROG00000039510-9758.712Rhinopithecus_roxellana
ENSIPUG00000016288rpf28655.823ENSRROG00000028992-9155.823Rhinopithecus_roxellana
ENSIPUG00000016288rpf29439.073YKR081C-8839.073Saccharomyces_cerevisiae
ENSIPUG00000016288rpf29251.943ENSSBOG00000025434-9751.943Saimiri_boliviensis_boliviensis
ENSIPUG00000016288rpf28559.813ENSSBOG00000029182-8859.813Saimiri_boliviensis_boliviensis
ENSIPUG00000016288rpf28359.843ENSSBOG00000022486-8861.290Saimiri_boliviensis_boliviensis
ENSIPUG00000016288rpf29056.561ENSSBOG00000030264-9056.561Saimiri_boliviensis_boliviensis
ENSIPUG00000016288rpf29150.000ENSSBOG00000034420-8853.012Saimiri_boliviensis_boliviensis
ENSIPUG00000016288rpf29472.251ENSSHAG00000002212RPF29862.583Sarcophilus_harrisii
ENSIPUG00000016288rpf29966.775ENSSFOG00015020916rpf210067.101Scleropages_formosus
ENSIPUG00000016288rpf29966.990ENSSMAG00000017499rpf29967.101Scophthalmus_maximus
ENSIPUG00000016288rpf29765.347ENSSDUG00000010383rpf29565.217Seriola_dumerili
ENSIPUG00000016288rpf29969.677ENSSLDG00000022111rpf29969.608Seriola_lalandi_dorsalis
ENSIPUG00000016288rpf29667.442ENSSARG00000012063RPF27567.442Sorex_araneus
ENSIPUG00000016288rpf29761.204ENSSPUG00000005108RPF29761.538Sphenodon_punctatus
ENSIPUG00000016288rpf29968.932ENSSPAG00000008035rpf29969.055Stegastes_partitus
ENSIPUG00000016288rpf29273.822ENSSSCG00000004394RPF29371.429Sus_scrofa
ENSIPUG00000016288rpf29765.333ENSTGUG00000012034RPF29865.667Taeniopygia_guttata
ENSIPUG00000016288rpf29966.234ENSTRUG00000018264rpf29966.557Takifugu_rubripes
ENSIPUG00000016288rpf29665.141ENSTNIG00000002749rpf29765.141Tetraodon_nigroviridis
ENSIPUG00000016288rpf27471.429ENSTBEG00000017151RPF27971.429Tupaia_belangeri
ENSIPUG00000016288rpf29675.393ENSTTRG00000012357RPF29371.429Tursiops_truncatus
ENSIPUG00000016288rpf29674.346ENSUAMG00000013497RPF29371.429Ursus_americanus
ENSIPUG00000016288rpf29674.346ENSUMAG00000025488RPF29471.429Ursus_maritimus
ENSIPUG00000016288rpf29274.869ENSVPAG00000009562RPF29371.429Vicugna_pacos
ENSIPUG00000016288rpf29667.442ENSVVUG00000006593-9658.863Vulpes_vulpes
ENSIPUG00000016288rpf28967.442ENSVVUG00000021231-9856.383Vulpes_vulpes
ENSIPUG00000016288rpf29864.452ENSXETG00000021335rpf29864.452Xenopus_tropicalis
ENSIPUG00000016288rpf29965.372ENSXCOG00000001590rpf29667.347Xiphophorus_couchianus
ENSIPUG00000016288rpf29961.165ENSXMAG00000021706rpf29961.238Xiphophorus_maculatus

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