EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000016424 (Gene tree)
Gene ID
108280079
Gene Symbol
CNOT2 (1 of many)
Alias
CDC36|NOT2|NOT2H
Full Name
CCR4-NOT transcription complex subunit 2
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Plus strand
Length
24479 bases
Position
chr19:4197738-4222216
Accession
108280079
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000024323NOT2_3_5PF04153.187.1e-3211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000025349CNOT2 (1 of many)-2015382XM_017494847ENSIPUP00000024323551 (aa)XP_017350336-
Gene Model
Click here to download ENSIPUG00000016424's gene model file
Pathways
Pathway IDPathway NameSource
ipu03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000016424's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000016424CNOT29585.441ENSIPUG00000018563cnot210084.291
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000016424CNOT29684.151ENSG00000111596CNOT210095.812Homo_sapiens
ENSIPUG00000016424CNOT29582.252ENSAPOG00000021013cnot210083.206Acanthochromis_polyacanthus
ENSIPUG00000016424CNOT27478.107ENSAPOG00000017950CNOT29880.864Acanthochromis_polyacanthus
ENSIPUG00000016424CNOT29683.992ENSAMEG00000011938CNOT29883.992Ailuropoda_melanoleuca
ENSIPUG00000016424CNOT28585.745ENSACIG00000020740cnot210085.361Amphilophus_citrinellus
ENSIPUG00000016424CNOT27585.756ENSACIG00000007480CNOT29789.264Amphilophus_citrinellus
ENSIPUG00000016424CNOT29582.443ENSAOCG00000022167cnot210083.397Amphiprion_ocellaris
ENSIPUG00000016424CNOT29582.443ENSAPEG00000011343cnot210083.397Amphiprion_percula
ENSIPUG00000016424CNOT29576.007ENSAPEG00000024152CNOT29789.877Amphiprion_percula
ENSIPUG00000016424CNOT29577.079ENSATEG00000023619CNOT210077.449Anabas_testudineus
ENSIPUG00000016424CNOT29583.174ENSATEG00000018641cnot210083.365Anabas_testudineus
ENSIPUG00000016424CNOT29584.571ENSAPLG00000012657CNOT29984.571Anas_platyrhynchos
ENSIPUG00000016424CNOT29684.181ENSACAG00000004779CNOT28684.181Anolis_carolinensis
ENSIPUG00000016424CNOT29784.240ENSANAG00000024330CNOT210084.240Aotus_nancymaae
ENSIPUG00000016424CNOT29577.989ENSACLG00000008724CNOT210077.256Astatotilapia_calliptera
ENSIPUG00000016424CNOT29581.298ENSACLG00000004020cnot210089.815Astatotilapia_calliptera
ENSIPUG00000016424CNOT29584.704ENSAMXG00000000972cnot210083.556Astyanax_mexicanus
ENSIPUG00000016424CNOT29684.151ENSBTAG00000003748CNOT29891.049Bos_taurus
ENSIPUG00000016424CNOT25739.823WBGene00003825ntl-27545.185Caenorhabditis_elegans
ENSIPUG00000016424CNOT29576.571ENSCJAG00000001567CNOT29776.571Callithrix_jacchus
ENSIPUG00000016424CNOT29683.992ENSCAFG00000000441CNOT29883.992Canis_familiaris
ENSIPUG00000016424CNOT29683.992ENSCAFG00020016849CNOT29883.992Canis_lupus_dingo
ENSIPUG00000016424CNOT29684.340ENSCHIG00000021610CNOT29984.340Capra_hircus
ENSIPUG00000016424CNOT29684.181ENSTSYG00000012927CNOT29891.358Carlito_syrichta
ENSIPUG00000016424CNOT29864.695ENSCAPG00000012192CNOT29964.815Cavia_aperea
ENSIPUG00000016424CNOT29680.374ENSCPOG00000004756CNOT29880.374Cavia_porcellus
ENSIPUG00000016424CNOT29684.151ENSCCAG00000033920CNOT29791.049Cebus_capucinus
ENSIPUG00000016424CNOT29684.280ENSCATG00000036994CNOT210095.812Cercocebus_atys
ENSIPUG00000016424CNOT29683.992ENSCLAG00000014354CNOT210086.813Chinchilla_lanigera
ENSIPUG00000016424CNOT29683.992ENSCSAG00000004177CNOT29883.992Chlorocebus_sabaeus
ENSIPUG00000016424CNOT29672.316ENSCHOG00000001283CNOT29872.316Choloepus_hoffmanni
ENSIPUG00000016424CNOT29584.453ENSCPBG00000013399CNOT210084.453Chrysemys_picta_bellii
ENSIPUG00000016424CNOT29683.992ENSCANG00000037683CNOT29785.802Colobus_angolensis_palliatus
ENSIPUG00000016424CNOT29683.992ENSCGRG00001016595Cnot29984.959Cricetulus_griseus_chok1gshd
ENSIPUG00000016424CNOT27588.350ENSCGRG00000001043Cnot29988.350Cricetulus_griseus_crigri
ENSIPUG00000016424CNOT29576.623ENSCSEG00000020129-9883.232Cynoglossus_semilaevis
ENSIPUG00000016424CNOT28584.681ENSCSEG00000015529cnot210084.330Cynoglossus_semilaevis
ENSIPUG00000016424CNOT29572.171ENSCVAG00000019882CNOT29488.650Cyprinodon_variegatus
ENSIPUG00000016424CNOT26086.364ENSCVAG00000003227cnot29787.654Cyprinodon_variegatus
ENSIPUG00000016424CNOT29583.748ENSDARG00000061802cnot210082.600Danio_rerio
ENSIPUG00000016424CNOT29982.117ENSDNOG00000019444CNOT29784.250Dasypus_novemcinctus
ENSIPUG00000016424CNOT29683.992ENSDORG00000011201Cnot210086.813Dipodomys_ordii
ENSIPUG00000016424CNOT25054.854FBgn0017550Rga5454.854Drosophila_melanogaster
ENSIPUG00000016424CNOT29683.804ENSETEG00000007655CNOT29883.804Echinops_telfairi
ENSIPUG00000016424CNOT29562.857ENSEBUG00000004355cnot210062.857Eptatretus_burgeri
ENSIPUG00000016424CNOT29683.585ENSEASG00005008113CNOT29890.741Equus_asinus_asinus
ENSIPUG00000016424CNOT29783.333ENSECAG00000013864CNOT29983.774Equus_caballus
ENSIPUG00000016424CNOT26595.238ENSEEUG00000003003CNOT26895.238Erinaceus_europaeus
ENSIPUG00000016424CNOT29578.674ENSELUG00000007279cnot29977.996Esox_lucius
ENSIPUG00000016424CNOT29584.820ENSELUG00000012055CNOT29984.820Esox_lucius
ENSIPUG00000016424CNOT29683.992ENSFCAG00000024278CNOT210095.812Felis_catus
ENSIPUG00000016424CNOT29584.381ENSFALG00000010251CNOT29984.381Ficedula_albicollis
ENSIPUG00000016424CNOT29683.804ENSFDAG00000008421CNOT210086.593Fukomys_damarensis
ENSIPUG00000016424CNOT29572.593ENSFHEG00000012921-10072.407Fundulus_heteroclitus
ENSIPUG00000016424CNOT29379.767ENSFHEG00000009600cnot29880.739Fundulus_heteroclitus
ENSIPUG00000016424CNOT29581.749ENSGMOG00000016382cnot210082.700Gadus_morhua
ENSIPUG00000016424CNOT29584.645ENSGALG00000010042CNOT210084.645Gallus_gallus
ENSIPUG00000016424CNOT29573.134ENSGAFG00000018811-10073.134Gambusia_affinis
ENSIPUG00000016424CNOT29379.767ENSGAFG00000021852cnot29981.237Gambusia_affinis
ENSIPUG00000016424CNOT29581.629ENSGACG00000013517cnot210082.955Gasterosteus_aculeatus
ENSIPUG00000016424CNOT29574.200ENSGACG00000015711-10074.200Gasterosteus_aculeatus
ENSIPUG00000016424CNOT29584.381ENSGAGG00000025593CNOT29984.381Gopherus_agassizii
ENSIPUG00000016424CNOT29982.569ENSGGOG00000027402CNOT210094.505Gorilla_gorilla
ENSIPUG00000016424CNOT29581.298ENSHBUG00000000166cnot210082.252Haplochromis_burtoni
ENSIPUG00000016424CNOT29577.989ENSHBUG00000016226CNOT210077.256Haplochromis_burtoni
ENSIPUG00000016424CNOT29683.804ENSHGLG00000007294CNOT210086.593Heterocephalus_glaber_female
ENSIPUG00000016424CNOT29683.804ENSHGLG00100014317CNOT210086.593Heterocephalus_glaber_male
ENSIPUG00000016424CNOT29580.762ENSHCOG00000008229cnot210082.095Hippocampus_comes
ENSIPUG00000016424CNOT29684.151ENSSTOG00000011114CNOT29984.959Ictidomys_tridecemlineatus
ENSIPUG00000016424CNOT29683.616ENSJJAG00000021519Cnot29984.553Jaculus_jaculus
ENSIPUG00000016424CNOT29571.218ENSKMAG00000008167-10072.509Kryptolebias_marmoratus
ENSIPUG00000016424CNOT29579.771ENSKMAG00000000577cnot210080.725Kryptolebias_marmoratus
ENSIPUG00000016424CNOT29581.870ENSLBEG00000004046cnot210082.824Labrus_bergylta
ENSIPUG00000016424CNOT29576.545ENSLBEG00000014428-10080.488Labrus_bergylta
ENSIPUG00000016424CNOT29583.908ENSLACG00000007016CNOT210083.908Latimeria_chalumnae
ENSIPUG00000016424CNOT29587.262ENSLOCG00000016216cnot29887.262Lepisosteus_oculatus
ENSIPUG00000016424CNOT29683.992ENSLAFG00000004789CNOT29883.992Loxodonta_africana
ENSIPUG00000016424CNOT29684.280ENSMFAG00000034373CNOT29891.049Macaca_fascicularis
ENSIPUG00000016424CNOT29684.280ENSMMUG00000014853CNOT29891.049Macaca_mulatta
ENSIPUG00000016424CNOT29683.992ENSMNEG00000045426CNOT210095.812Macaca_nemestrina
ENSIPUG00000016424CNOT29684.280ENSMLEG00000041145CNOT29891.049Mandrillus_leucophaeus
ENSIPUG00000016424CNOT29582.061ENSMAMG00000002615cnot210083.015Mastacembelus_armatus
ENSIPUG00000016424CNOT29575.556ENSMAMG00000019519CNOT210089.264Mastacembelus_armatus
ENSIPUG00000016424CNOT29581.298ENSMZEG00005017275cnot210089.815Maylandia_zebra
ENSIPUG00000016424CNOT29577.989ENSMZEG00005016159CNOT210077.256Maylandia_zebra
ENSIPUG00000016424CNOT29579.238ENSMGAG00000010615CNOT29779.238Meleagris_gallopavo
ENSIPUG00000016424CNOT29683.992ENSMAUG00000012049Cnot210086.813Mesocricetus_auratus
ENSIPUG00000016424CNOT29684.151ENSMICG00000001644CNOT29791.049Microcebus_murinus
ENSIPUG00000016424CNOT29683.992ENSMOCG00000011255Cnot210086.813Microtus_ochrogaster
ENSIPUG00000016424CNOT29581.298ENSMMOG00000018877cnot210082.252Mola_mola
ENSIPUG00000016424CNOT29578.383ENSMMOG00000006017CNOT210079.135Mola_mola
ENSIPUG00000016424CNOT29783.521ENSMODG00000020387CNOT29683.521Monodelphis_domestica
ENSIPUG00000016424CNOT29576.015ENSMALG00000008200CNOT210076.568Monopterus_albus
ENSIPUG00000016424CNOT29581.453ENSMALG00000013354cnot210082.409Monopterus_albus
ENSIPUG00000016424CNOT29683.774MGP_CAROLIEiJ_G0015822Cnot29984.553Mus_caroli
ENSIPUG00000016424CNOT29683.804ENSMUSG00000020166Cnot210086.593Mus_musculus
ENSIPUG00000016424CNOT29683.396MGP_PahariEiJ_G0031265Cnot29984.146Mus_pahari
ENSIPUG00000016424CNOT29683.962MGP_SPRETEiJ_G0016644Cnot29984.756Mus_spretus
ENSIPUG00000016424CNOT29683.992ENSMPUG00000017494CNOT29883.992Mustela_putorius_furo
ENSIPUG00000016424CNOT29683.992ENSMLUG00000012301CNOT29883.992Myotis_lucifugus
ENSIPUG00000016424CNOT29683.804ENSNGAG00000020842Cnot210086.593Nannospalax_galili
ENSIPUG00000016424CNOT29577.989ENSNBRG00000015257CNOT210077.256Neolamprologus_brichardi
ENSIPUG00000016424CNOT29683.992ENSNLEG00000004064CNOT29791.049Nomascus_leucogenys
ENSIPUG00000016424CNOT29661.770ENSOPRG00000002600CNOT29861.770Ochotona_princeps
ENSIPUG00000016424CNOT29683.992ENSODEG00000004532CNOT29883.992Octodon_degus
ENSIPUG00000016424CNOT29576.822ENSONIG00000009907CNOT210077.383Oreochromis_niloticus
ENSIPUG00000016424CNOT29581.298ENSONIG00000010467cnot210082.252Oreochromis_niloticus
ENSIPUG00000016424CNOT29683.992ENSOANG00000005959CNOT29683.992Ornithorhynchus_anatinus
ENSIPUG00000016424CNOT29683.992ENSOCUG00000009951CNOT29683.992Oryctolagus_cuniculus
ENSIPUG00000016424CNOT29675.000ENSORLG00000017361CNOT29980.165Oryzias_latipes
ENSIPUG00000016424CNOT29580.000ENSORLG00000016454cnot210082.582Oryzias_latipes
ENSIPUG00000016424CNOT29580.725ENSORLG00020009002cnot210080.725Oryzias_latipes_hni
ENSIPUG00000016424CNOT29675.184ENSORLG00020005328CNOT29980.372Oryzias_latipes_hni
ENSIPUG00000016424CNOT28177.181ENSORLG00015022502cnot29777.181Oryzias_latipes_hsok
ENSIPUG00000016424CNOT29675.000ENSORLG00015004707CNOT29979.503Oryzias_latipes_hsok
ENSIPUG00000016424CNOT29579.389ENSOMEG00000023230cnot210080.344Oryzias_melastigma
ENSIPUG00000016424CNOT29575.746ENSOMEG00000022902CNOT29989.264Oryzias_melastigma
ENSIPUG00000016424CNOT29683.804ENSOGAG00000008391-9883.804Otolemur_garnettii
ENSIPUG00000016424CNOT29669.376ENSOGAG00000031982-9869.376Otolemur_garnettii
ENSIPUG00000016424CNOT29684.181ENSOARG00000020211CNOT29884.181Ovis_aries
ENSIPUG00000016424CNOT29981.901ENSPPAG00000042482CNOT29691.049Pan_paniscus
ENSIPUG00000016424CNOT29683.992ENSPPRG00000004080CNOT210095.812Panthera_pardus
ENSIPUG00000016424CNOT29683.992ENSPTIG00000007082CNOT29984.959Panthera_tigris_altaica
ENSIPUG00000016424CNOT29981.901ENSPTRG00000005216CNOT29691.049Pan_troglodytes
ENSIPUG00000016424CNOT29684.280ENSPANG00000018112CNOT29891.049Papio_anubis
ENSIPUG00000016424CNOT29585.057ENSPKIG00000022871CNOT210085.057Paramormyrops_kingsleyae
ENSIPUG00000016424CNOT29585.249ENSPKIG00000022757cnot210085.249Paramormyrops_kingsleyae
ENSIPUG00000016424CNOT29584.645ENSPSIG00000015414CNOT210084.645Pelodiscus_sinensis
ENSIPUG00000016424CNOT27386.510ENSPMGG00000016559CNOT210089.602Periophthalmus_magnuspinnatus
ENSIPUG00000016424CNOT29577.989ENSPMGG00000009456cnot210079.317Periophthalmus_magnuspinnatus
ENSIPUG00000016424CNOT29683.804ENSPEMG00000023296Cnot210086.593Peromyscus_maniculatus_bairdii
ENSIPUG00000016424CNOT29567.992ENSPMAG00000002220cnot210068.182Petromyzon_marinus
ENSIPUG00000016424CNOT29783.146ENSPCIG00000010670CNOT29884.000Phascolarctos_cinereus
ENSIPUG00000016424CNOT29379.572ENSPFOG00000012236cnot29880.545Poecilia_formosa
ENSIPUG00000016424CNOT29572.761ENSPFOG00000015440-10072.761Poecilia_formosa
ENSIPUG00000016424CNOT29379.377ENSPLAG00000006094cnot29880.350Poecilia_latipinna
ENSIPUG00000016424CNOT29572.761ENSPLAG00000007644-10072.761Poecilia_latipinna
ENSIPUG00000016424CNOT29572.761ENSPMEG00000023331-9888.957Poecilia_mexicana
ENSIPUG00000016424CNOT29379.572ENSPMEG00000012236cnot29880.545Poecilia_mexicana
ENSIPUG00000016424CNOT29573.645ENSPREG00000006034CNOT210073.458Poecilia_reticulata
ENSIPUG00000016424CNOT29379.183ENSPREG00000020804cnot29880.156Poecilia_reticulata
ENSIPUG00000016424CNOT28385.371ENSPPYG00000004765CNOT29885.371Pongo_abelii
ENSIPUG00000016424CNOT29684.181ENSPCAG00000000962CNOT29884.181Procavia_capensis
ENSIPUG00000016424CNOT29683.992ENSPCOG00000028865CNOT29991.049Propithecus_coquereli
ENSIPUG00000016424CNOT29676.083ENSPVAG00000007074CNOT29876.083Pteropus_vampyrus
ENSIPUG00000016424CNOT29581.298ENSPNYG00000021545cnot210082.252Pundamilia_nyererei
ENSIPUG00000016424CNOT29577.989ENSPNYG00000009888CNOT210077.383Pundamilia_nyererei
ENSIPUG00000016424CNOT29584.866ENSPNAG00000015107cnot210083.908Pygocentrus_nattereri
ENSIPUG00000016424CNOT29684.746ENSPNAG00000021540CNOT210086.011Pygocentrus_nattereri
ENSIPUG00000016424CNOT29683.804ENSRNOG00000004909Cnot29986.215Rattus_norvegicus
ENSIPUG00000016424CNOT29684.280ENSRBIG00000039989CNOT210095.812Rhinopithecus_bieti
ENSIPUG00000016424CNOT29683.992ENSRROG00000042572CNOT29891.049Rhinopithecus_roxellana
ENSIPUG00000016424CNOT29683.992ENSSBOG00000026423CNOT29891.049Saimiri_boliviensis_boliviensis
ENSIPUG00000016424CNOT29783.333ENSSHAG00000005001CNOT29784.190Sarcophilus_harrisii
ENSIPUG00000016424CNOT29586.590ENSSFOG00015005243cnot210086.590Scleropages_formosus
ENSIPUG00000016424CNOT29586.398ENSSFOG00015017789CNOT210086.398Scleropages_formosus
ENSIPUG00000016424CNOT29581.369ENSSMAG00000009857cnot210082.319Scophthalmus_maximus
ENSIPUG00000016424CNOT29576.981ENSSMAG00000006667CNOT210077.213Scophthalmus_maximus
ENSIPUG00000016424CNOT29582.634ENSSDUG00000020166cnot210083.588Seriola_dumerili
ENSIPUG00000016424CNOT29577.264ENSSDUG00000013716CNOT29789.877Seriola_dumerili
ENSIPUG00000016424CNOT29582.634ENSSLDG00000010952cnot210083.588Seriola_lalandi_dorsalis
ENSIPUG00000016424CNOT28878.357ENSSLDG00000009614-9976.172Seriola_lalandi_dorsalis
ENSIPUG00000016424CNOT28386.522ENSSARG00000001038CNOT28586.522Sorex_araneus
ENSIPUG00000016424CNOT29576.994ENSSPAG00000013982-9790.154Stegastes_partitus
ENSIPUG00000016424CNOT28286.062ENSSPAG00000006784cnot210086.062Stegastes_partitus
ENSIPUG00000016424CNOT29683.962ENSSSCG00000000502CNOT29891.049Sus_scrofa
ENSIPUG00000016424CNOT29584.381ENSTGUG00000007018CNOT210084.381Taeniopygia_guttata
ENSIPUG00000016424CNOT29580.344ENSTRUG00000002924cnot210080.725Takifugu_rubripes
ENSIPUG00000016424CNOT29679.887ENSTNIG00000008354cnot29880.263Tetraodon_nigroviridis
ENSIPUG00000016424CNOT29575.047ENSTNIG00000002496CNOT29775.047Tetraodon_nigroviridis
ENSIPUG00000016424CNOT29680.675ENSTTRG00000004829CNOT29880.675Tursiops_truncatus
ENSIPUG00000016424CNOT29584.837ENSUAMG00000016753CNOT210084.837Ursus_americanus
ENSIPUG00000016424CNOT29684.151ENSUMAG00000020863CNOT29891.049Ursus_maritimus
ENSIPUG00000016424CNOT29681.733ENSVPAG00000006870CNOT29881.733Vicugna_pacos
ENSIPUG00000016424CNOT29584.000ENSVVUG00000008840CNOT29984.242Vulpes_vulpes
ENSIPUG00000016424CNOT29577.273ENSXETG00000011385cnot210090.432Xenopus_tropicalis
ENSIPUG00000016424CNOT26087.688ENSXCOG00000013026CNOT210089.264Xiphophorus_couchianus
ENSIPUG00000016424CNOT28582.516ENSXCOG00000002160cnot29982.062Xiphophorus_couchianus
ENSIPUG00000016424CNOT29379.572ENSXMAG00000019279cnot29880.545Xiphophorus_maculatus
ENSIPUG00000016424CNOT29572.948ENSXMAG00000010366CNOT29589.264Xiphophorus_maculatus

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