EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000016448 (Gene tree)
Gene ID: 108259266
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 39537 bases
Position: chr27:3862847-3902383
Accession: 108259266
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000024724	ResIII	PF04851.15	7.6e-06	1	1
ENSIPUP00000024795	BRK	PF07533.16	6.3e-33	1	2
ENSIPUP00000024795	BRK	PF07533.16	6.3e-33	2	2
ENSIPUP00000024724	BRK	PF07533.16	4.7e-32	1	2
ENSIPUP00000024724	BRK	PF07533.16	4.7e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000025829	-	2754	-	ENSIPUP00000024795	917 (aa)	-	-
ENSIPUT00000025756	-	7227	XM_017458575	ENSIPUP00000024724	2408 (aa)	XP_017314064	-
ENSIPUT00000025859	-	1446	-	ENSIPUP00000024825	481 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000016448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000016448's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000016448	chd9	74	59.388	ENSIPUG00000019891	chd8	71	60.472
ENSIPUG00000016448	chd9	90	52.349	ENSIPUG00000007585	chd7	60	64.793
ENSIPUG00000016448	chd9	69	65.969	ENSIPUG00000003692	chd6	61	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000016448	chd9	97	73.358	ENSG00000177200	CHD9	97	72.263	Homo_sapiens
ENSIPUG00000016448	chd9	97	81.071	ENSAPOG00000023034	chd9	99	78.095	Acanthochromis_polyacanthus
ENSIPUG00000016448	chd9	98	72.727	ENSAMEG00000016232	CHD9	80	70.331	Ailuropoda_melanoleuca
ENSIPUG00000016448	chd9	97	81.429	ENSACIG00000004097	chd9	82	75.072	Amphilophus_citrinellus
ENSIPUG00000016448	chd9	97	80.986	ENSAOCG00000005487	chd9	99	78.068	Amphiprion_ocellaris
ENSIPUG00000016448	chd9	97	81.851	ENSAPEG00000009859	chd9	99	78.068	Amphiprion_percula
ENSIPUG00000016448	chd9	97	83.688	ENSATEG00000002748	chd9	83	78.243	Anabas_testudineus
ENSIPUG00000016448	chd9	97	73.723	ENSAPLG00000002826	CHD9	82	70.278	Anas_platyrhynchos
ENSIPUG00000016448	chd9	98	73.551	ENSACAG00000016150	CHD9	78	71.256	Anolis_carolinensis
ENSIPUG00000016448	chd9	97	73.358	ENSANAG00000015630	CHD9	97	72.263	Aotus_nancymaae
ENSIPUG00000016448	chd9	97	80.488	ENSACLG00000016899	chd9	84	76.121	Astatotilapia_calliptera
ENSIPUG00000016448	chd9	98	83.005	ENSAMXG00000005652	chd9	98	84.824	Astyanax_mexicanus
ENSIPUG00000016448	chd9	97	73.358	ENSBTAG00000002287	CHD9	82	69.081	Bos_taurus
ENSIPUG00000016448	chd9	97	73.723	ENSCJAG00000001573	CHD9	97	72.628	Callithrix_jacchus
ENSIPUG00000016448	chd9	97	73.358	ENSCAFG00000009699	CHD9	80	70.216	Canis_familiaris
ENSIPUG00000016448	chd9	97	73.358	ENSCAFG00020002879	CHD9	92	72.263	Canis_lupus_dingo
ENSIPUG00000016448	chd9	97	69.343	ENSCHIG00000021000	CHD9	81	67.680	Capra_hircus
ENSIPUG00000016448	chd9	97	73.358	ENSTSYG00000007693	CHD9	92	72.263	Carlito_syrichta
ENSIPUG00000016448	chd9	76	80.328	ENSCAPG00000011604	CHD9	60	61.034	Cavia_aperea
ENSIPUG00000016448	chd9	97	72.993	ENSCPOG00000036544	CHD9	81	65.947	Cavia_porcellus
ENSIPUG00000016448	chd9	97	74.453	ENSCCAG00000036178	CHD9	97	73.358	Cebus_capucinus
ENSIPUG00000016448	chd9	97	74.088	ENSCATG00000036753	CHD9	92	72.993	Cercocebus_atys
ENSIPUG00000016448	chd9	98	73.723	ENSCLAG00000007137	CHD9	96	80.401	Chinchilla_lanigera
ENSIPUG00000016448	chd9	97	74.088	ENSCSAG00000005311	CHD9	82	69.154	Chlorocebus_sabaeus
ENSIPUG00000016448	chd9	63	90.885	ENSCHOG00000003935	CHD9	55	90.885	Choloepus_hoffmanni
ENSIPUG00000016448	chd9	91	79.349	ENSCPBG00000012459	CHD9	81	80.169	Chrysemys_picta_bellii
ENSIPUG00000016448	chd9	97	74.088	ENSCANG00000030349	CHD9	92	72.993	Colobus_angolensis_palliatus
ENSIPUG00000016448	chd9	97	72.628	ENSCGRG00001016150	Chd9	81	69.815	Cricetulus_griseus_chok1gshd
ENSIPUG00000016448	chd9	97	72.628	ENSCGRG00000012850	Chd9	95	81.513	Cricetulus_griseus_crigri
ENSIPUG00000016448	chd9	97	75.542	ENSCSEG00000009209	chd9	99	74.929	Cynoglossus_semilaevis
ENSIPUG00000016448	chd9	94	77.656	ENSCVAG00000016195	chd9	83	76.691	Cyprinodon_variegatus
ENSIPUG00000016448	chd9	98	80.769	ENSDARG00000074498	chd9	99	81.837	Danio_rerio
ENSIPUG00000016448	chd9	97	73.091	ENSDNOG00000006045	CHD9	99	69.536	Dasypus_novemcinctus
ENSIPUG00000016448	chd9	99	73.723	ENSDORG00000008523	-	96	69.894	Dipodomys_ordii
ENSIPUG00000016448	chd9	87	92.063	ENSETEG00000009565	CHD9	73	92.063	Echinops_telfairi
ENSIPUG00000016448	chd9	98	72.993	ENSEASG00005014832	CHD9	96	80.984	Equus_asinus_asinus
ENSIPUG00000016448	chd9	98	72.993	ENSECAG00000011505	CHD9	80	69.898	Equus_caballus
ENSIPUG00000016448	chd9	76	86.344	ENSEEUG00000014515	CHD9	68	83.978	Erinaceus_europaeus
ENSIPUG00000016448	chd9	91	84.452	ENSELUG00000006031	chd9	99	74.180	Esox_lucius
ENSIPUG00000016448	chd9	97	73.723	ENSFCAG00000022534	CHD9	92	72.628	Felis_catus
ENSIPUG00000016448	chd9	97	74.638	ENSFALG00000013276	CHD9	98	70.178	Ficedula_albicollis
ENSIPUG00000016448	chd9	98	73.723	ENSFDAG00000021037	CHD9	80	70.114	Fukomys_damarensis
ENSIPUG00000016448	chd9	96	77.975	ENSFHEG00000006068	chd9	98	77.691	Fundulus_heteroclitus
ENSIPUG00000016448	chd9	80	83.299	ENSGMOG00000006040	chd9	84	83.571	Gadus_morhua
ENSIPUG00000016448	chd9	93	71.762	ENSGALG00000039178	CHD9	81	71.766	Gallus_gallus
ENSIPUG00000016448	chd9	96	77.902	ENSGAFG00000010014	chd9	99	76.852	Gambusia_affinis
ENSIPUG00000016448	chd9	99	60.021	ENSGAGG00000001048	-	91	70.896	Gopherus_agassizii
ENSIPUG00000016448	chd9	97	73.723	ENSGGOG00000014816	CHD9	97	72.628	Gorilla_gorilla
ENSIPUG00000016448	chd9	97	81.818	ENSHBUG00000023322	chd9	99	77.374	Haplochromis_burtoni
ENSIPUG00000016448	chd9	97	73.723	ENSHGLG00000014938	CHD9	96	80.401	Heterocephalus_glaber_female
ENSIPUG00000016448	chd9	97	58.867	ENSHGLG00100007620	-	93	68.248	Heterocephalus_glaber_male
ENSIPUG00000016448	chd9	98	79.094	ENSHCOG00000000937	chd9	99	76.505	Hippocampus_comes
ENSIPUG00000016448	chd9	97	74.453	ENSSTOG00000022273	CHD9	96	80.638	Ictidomys_tridecemlineatus
ENSIPUG00000016448	chd9	97	73.358	ENSJJAG00000015741	-	96	70.188	Jaculus_jaculus
ENSIPUG00000016448	chd9	96	77.934	ENSKMAG00000016784	chd9	99	76.942	Kryptolebias_marmoratus
ENSIPUG00000016448	chd9	96	77.906	ENSLBEG00000012077	chd9	99	77.056	Labrus_bergylta
ENSIPUG00000016448	chd9	95	66.457	ENSLACG00000005557	CHD9	81	65.078	Latimeria_chalumnae
ENSIPUG00000016448	chd9	97	79.078	ENSLOCG00000007225	chd9	99	74.990	Lepisosteus_oculatus
ENSIPUG00000016448	chd9	92	72.143	ENSLAFG00000015374	CHD9	80	69.595	Loxodonta_africana
ENSIPUG00000016448	chd9	97	74.088	ENSMFAG00000041354	CHD9	95	70.178	Macaca_fascicularis
ENSIPUG00000016448	chd9	97	74.088	ENSMMUG00000016310	CHD9	92	72.993	Macaca_mulatta
ENSIPUG00000016448	chd9	97	74.088	ENSMNEG00000031494	CHD9	81	72.214	Macaca_nemestrina
ENSIPUG00000016448	chd9	97	74.088	ENSMLEG00000043219	CHD9	92	72.993	Mandrillus_leucophaeus
ENSIPUG00000016448	chd9	97	81.404	ENSMAMG00000003909	chd9	82	77.751	Mastacembelus_armatus
ENSIPUG00000016448	chd9	97	81.818	ENSMZEG00005006581	chd9	99	78.133	Maylandia_zebra
ENSIPUG00000016448	chd9	97	73.358	ENSMGAG00000004642	CHD9	59	71.817	Meleagris_gallopavo
ENSIPUG00000016448	chd9	90	62.599	ENSMAUG00000000526	-	92	72.112	Mesocricetus_auratus
ENSIPUG00000016448	chd9	97	74.453	ENSMICG00000016679	CHD9	92	73.358	Microcebus_murinus
ENSIPUG00000016448	chd9	92	62.822	ENSMOCG00000010691	-	92	71.898	Microtus_ochrogaster
ENSIPUG00000016448	chd9	97	81.139	ENSMMOG00000016406	chd9	83	76.868	Mola_mola
ENSIPUG00000016448	chd9	98	65.157	ENSMODG00000013142	-	99	77.167	Monodelphis_domestica
ENSIPUG00000016448	chd9	94	78.194	ENSMALG00000013306	chd9	82	76.645	Monopterus_albus
ENSIPUG00000016448	chd9	92	73.358	MGP_CAROLIEiJ_G0031364	Chd9	80	70.508	Mus_caroli
ENSIPUG00000016448	chd9	97	72.628	ENSMUSG00000056608	Chd9	95	81.513	Mus_musculus
ENSIPUG00000016448	chd9	92	72.628	MGP_PahariEiJ_G0022964	Chd9	79	69.484	Mus_pahari
ENSIPUG00000016448	chd9	97	72.263	MGP_SPRETEiJ_G0032483	Chd9	80	70.440	Mus_spretus
ENSIPUG00000016448	chd9	98	73.723	ENSMPUG00000003285	CHD9	80	70.391	Mustela_putorius_furo
ENSIPUG00000016448	chd9	97	73.358	ENSMLUG00000004456	CHD9	82	69.056	Myotis_lucifugus
ENSIPUG00000016448	chd9	92	62.222	ENSNGAG00000015820	-	92	71.898	Nannospalax_galili
ENSIPUG00000016448	chd9	97	82.686	ENSNBRG00000009423	chd9	99	77.216	Neolamprologus_brichardi
ENSIPUG00000016448	chd9	71	73.723	ENSNLEG00000001026	CHD9	81	72.383	Nomascus_leucogenys
ENSIPUG00000016448	chd9	73	96.992	ENSMEUG00000008222	-	69	91.083	Notamacropus_eugenii
ENSIPUG00000016448	chd9	81	85.075	ENSOPRG00000011168	CHD9	66	87.006	Ochotona_princeps
ENSIPUG00000016448	chd9	97	73.091	ENSODEG00000004466	CHD9	82	69.362	Octodon_degus
ENSIPUG00000016448	chd9	97	81.818	ENSONIG00000002816	chd9	98	78.128	Oreochromis_niloticus
ENSIPUG00000016448	chd9	97	72.628	ENSOANG00000013401	CHD9	80	71.024	Ornithorhynchus_anatinus
ENSIPUG00000016448	chd9	97	73.455	ENSOCUG00000001016	CHD9	97	69.208	Oryctolagus_cuniculus
ENSIPUG00000016448	chd9	96	78.332	ENSORLG00000013810	chd9	97	77.600	Oryzias_latipes
ENSIPUG00000016448	chd9	96	77.934	ENSORLG00020020665	chd9	82	76.881	Oryzias_latipes_hni
ENSIPUG00000016448	chd9	96	77.741	ENSORLG00015019126	chd9	98	76.660	Oryzias_latipes_hsok
ENSIPUG00000016448	chd9	55	83.845	ENSOMEG00000015978	chd9	73	83.845	Oryzias_melastigma
ENSIPUG00000016448	chd9	97	73.723	ENSOGAG00000002110	CHD9	80	70.195	Otolemur_garnettii
ENSIPUG00000016448	chd9	97	72.202	ENSOARG00000017664	CHD9	82	69.014	Ovis_aries
ENSIPUG00000016448	chd9	97	73.723	ENSPPAG00000039388	-	98	69.205	Pan_paniscus
ENSIPUG00000016448	chd9	97	73.455	ENSPPRG00000004801	CHD9	92	72.364	Panthera_pardus
ENSIPUG00000016448	chd9	97	63.869	ENSPTIG00000021854	CHD9	92	62.774	Panthera_tigris_altaica
ENSIPUG00000016448	chd9	97	73.723	ENSPTRG00000008113	CHD9	97	72.628	Pan_troglodytes
ENSIPUG00000016448	chd9	97	74.088	ENSPANG00000019307	CHD9	98	69.183	Papio_anubis
ENSIPUG00000016448	chd9	94	72.222	ENSPKIG00000025401	-	87	68.395	Paramormyrops_kingsleyae
ENSIPUG00000016448	chd9	96	77.303	ENSPKIG00000021876	chd9	99	76.841	Paramormyrops_kingsleyae
ENSIPUG00000016448	chd9	56	77.193	ENSPSIG00000008099	CHD9	72	78.190	Pelodiscus_sinensis
ENSIPUG00000016448	chd9	97	70.183	ENSPMGG00000021802	chd9	98	80.783	Periophthalmus_magnuspinnatus
ENSIPUG00000016448	chd9	97	60.190	ENSPEMG00000021464	-	92	71.898	Peromyscus_maniculatus_bairdii
ENSIPUG00000016448	chd9	66	58.304	ENSPMAG00000006035	-	66	70.822	Petromyzon_marinus
ENSIPUG00000016448	chd9	86	71.769	ENSPCIG00000017215	CHD9	98	72.977	Phascolarctos_cinereus
ENSIPUG00000016448	chd9	96	77.736	ENSPFOG00000015839	chd9	82	76.852	Poecilia_formosa
ENSIPUG00000016448	chd9	96	78.616	ENSPLAG00000011118	chd9	99	77.539	Poecilia_latipinna
ENSIPUG00000016448	chd9	96	77.694	ENSPMEG00000015106	chd9	83	76.675	Poecilia_mexicana
ENSIPUG00000016448	chd9	96	78.302	ENSPREG00000006473	chd9	99	76.426	Poecilia_reticulata
ENSIPUG00000016448	chd9	97	73.723	ENSPPYG00000007348	CHD9	82	69.499	Pongo_abelii
ENSIPUG00000016448	chd9	69	80.183	ENSPCAG00000007564	CHD9	69	81.139	Procavia_capensis
ENSIPUG00000016448	chd9	97	73.358	ENSPCOG00000028433	CHD9	92	72.263	Propithecus_coquereli
ENSIPUG00000016448	chd9	90	85.075	ENSPVAG00000015617	CHD9	79	73.317	Pteropus_vampyrus
ENSIPUG00000016448	chd9	97	81.818	ENSPNYG00000010947	chd9	99	77.537	Pundamilia_nyererei
ENSIPUG00000016448	chd9	97	87.454	ENSPNAG00000024141	chd9	99	85.773	Pygocentrus_nattereri
ENSIPUG00000016448	chd9	81	69.663	ENSRNOG00000049302	Chd9	93	58.229	Rattus_norvegicus
ENSIPUG00000016448	chd9	97	74.088	ENSRBIG00000035553	CHD9	98	69.100	Rhinopithecus_bieti
ENSIPUG00000016448	chd9	97	74.088	ENSRROG00000033278	CHD9	99	69.202	Rhinopithecus_roxellana
ENSIPUG00000016448	chd9	97	74.453	ENSSBOG00000030240	CHD9	97	73.358	Saimiri_boliviensis_boliviensis
ENSIPUG00000016448	chd9	99	71.377	ENSSHAG00000002719	CHD9	80	70.259	Sarcophilus_harrisii
ENSIPUG00000016448	chd9	97	79.505	ENSSFOG00015001327	chd9	98	72.623	Scleropages_formosus
ENSIPUG00000016448	chd9	97	77.212	ENSSFOG00015020209	chd9	99	76.961	Scleropages_formosus
ENSIPUG00000016448	chd9	96	78.098	ENSSMAG00000008953	chd9	99	76.976	Scophthalmus_maximus
ENSIPUG00000016448	chd9	97	82.807	ENSSDUG00000006139	chd9	99	79.167	Seriola_dumerili
ENSIPUG00000016448	chd9	97	83.039	ENSSLDG00000017818	chd9	99	78.382	Seriola_lalandi_dorsalis
ENSIPUG00000016448	chd9	97	73.723	ENSSARG00000010632	CHD9	54	77.280	Sorex_araneus
ENSIPUG00000016448	chd9	91	64.679	ENSSPUG00000017465	-	91	72.826	Sphenodon_punctatus
ENSIPUG00000016448	chd9	97	81.690	ENSSPAG00000021649	chd9	99	78.037	Stegastes_partitus
ENSIPUG00000016448	chd9	98	73.358	ENSSSCG00000033591	CHD9	80	68.832	Sus_scrofa
ENSIPUG00000016448	chd9	87	73.039	ENSTGUG00000007476	CHD9	80	73.664	Taeniopygia_guttata
ENSIPUG00000016448	chd9	97	80.216	ENSTRUG00000009125	chd9	84	75.579	Takifugu_rubripes
ENSIPUG00000016448	chd9	76	75.524	ENSTNIG00000003825	chd9	89	83.486	Tetraodon_nigroviridis
ENSIPUG00000016448	chd9	65	93.220	ENSTBEG00000016052	-	67	93.220	Tupaia_belangeri
ENSIPUG00000016448	chd9	84	74.970	ENSTTRG00000012674	CHD9	72	71.022	Tursiops_truncatus
ENSIPUG00000016448	chd9	98	73.358	ENSUAMG00000022706	CHD9	96	67.565	Ursus_americanus
ENSIPUG00000016448	chd9	76	86.569	ENSUMAG00000004043	CHD9	94	87.740	Ursus_maritimus
ENSIPUG00000016448	chd9	98	73.723	ENSVPAG00000001374	CHD9	79	68.269	Vicugna_pacos
ENSIPUG00000016448	chd9	97	73.358	ENSVVUG00000019435	CHD9	80	70.169	Vulpes_vulpes
ENSIPUG00000016448	chd9	94	69.778	ENSXETG00000000349	chd9	78	75.976	Xenopus_tropicalis
ENSIPUG00000016448	chd9	96	78.521	ENSXCOG00000012997	chd9	99	77.297	Xiphophorus_couchianus
ENSIPUG00000016448	chd9	96	78.450	ENSXMAG00000016192	chd9	99	77.691	Xiphophorus_maculatus