EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000016649 (Gene tree)
Gene ID: 108255656
Gene Symbol: atxn2
Alias: si:dkey-165i4.1
Full Name: ataxin 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 42732 bases
Position: chr22:11492353-11535084
Accession: 108255656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000024693	PAM2	PF07145.15	7.8e-06	1	1
ENSIPUP00000024653	PAM2	PF07145.15	8.1e-06	1	1
ENSIPUP00000024615	PAM2	PF07145.15	8.1e-06	1	1
ENSIPUP00000024693	LsmAD	PF06741.13	3.4e-17	1	1
ENSIPUP00000024653	LsmAD	PF06741.13	3.5e-17	1	1
ENSIPUP00000024615	LsmAD	PF06741.13	3.5e-17	1	1
ENSIPUP00000024693	SM-ATX	PF14438.6	2.5e-20	1	1
ENSIPUP00000024653	SM-ATX	PF14438.6	2.6e-20	1	1
ENSIPUP00000024615	SM-ATX	PF14438.6	2.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000025685	-	3764	XM_017451760	ENSIPUP00000024653	1045 (aa)	XP_017307249	-
ENSIPUT00000025725	-	3677	XM_017451763	ENSIPUP00000024693	1016 (aa)	XP_017307252	-
ENSIPUT00000025646	-	3782	XM_017451757	ENSIPUP00000024615	1051 (aa)	XP_017307246	-

Gene Model

Click here to download ENSIPUG00000016649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000016649's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000016649	atxn2	100	69.353	ENSAPOG00000014663	atxn2	97	70.789	Acanthochromis_polyacanthus
ENSIPUG00000016649	atxn2	99	69.867	ENSAOCG00000001107	atxn2	97	70.691	Amphiprion_ocellaris
ENSIPUG00000016649	atxn2	100	69.260	ENSAPEG00000020250	atxn2	97	70.691	Amphiprion_percula
ENSIPUG00000016649	atxn2	93	79.298	ENSACLG00000013359	atxn2	90	79.298	Astatotilapia_calliptera
ENSIPUG00000016649	atxn2	99	77.575	ENSAMXG00000002342	atxn2	100	76.482	Astyanax_mexicanus
ENSIPUG00000016649	atxn2	73	77.586	ENSCAPG00000013332	ATXN2	83	77.586	Cavia_aperea
ENSIPUG00000016649	atxn2	67	62.802	ENSCHOG00000004284	ATXN2	69	62.802	Choloepus_hoffmanni
ENSIPUG00000016649	atxn2	94	57.409	ENSCPBG00000003465	ATXN2	100	57.436	Chrysemys_picta_bellii
ENSIPUG00000016649	atxn2	100	66.075	ENSCSEG00000018366	atxn2	97	67.343	Cynoglossus_semilaevis
ENSIPUG00000016649	atxn2	100	65.666	ENSCSEG00000009072	-	97	66.214	Cynoglossus_semilaevis
ENSIPUG00000016649	atxn2	95	73.469	ENSCVAG00000020160	atxn2	97	67.278	Cyprinodon_variegatus
ENSIPUG00000016649	atxn2	85	59.184	ENSDORG00000000808	Atxn2	87	34.520	Dipodomys_ordii
ENSIPUG00000016649	atxn2	89	58.013	ENSETEG00000005224	ATXN2	72	58.013	Echinops_telfairi
ENSIPUG00000016649	atxn2	96	57.380	ENSEASG00005012077	ATXN2	99	56.715	Equus_asinus_asinus
ENSIPUG00000016649	atxn2	75	67.524	ENSEEUG00000014635	-	70	67.524	Erinaceus_europaeus
ENSIPUG00000016649	atxn2	99	66.923	ENSELUG00000019632	atxn2	94	73.563	Esox_lucius
ENSIPUG00000016649	atxn2	90	67.389	ENSFHEG00000019561	atxn2	95	67.975	Fundulus_heteroclitus
ENSIPUG00000016649	atxn2	87	81.633	ENSGMOG00000007412	atxn2	85	81.695	Gadus_morhua
ENSIPUG00000016649	atxn2	95	68.245	ENSGAFG00000003302	atxn2	97	68.380	Gambusia_affinis
ENSIPUG00000016649	atxn2	95	80.952	ENSGACG00000006295	atxn2	93	80.952	Gasterosteus_aculeatus
ENSIPUG00000016649	atxn2	94	58.859	ENSGAGG00000005014	ATXN2	100	58.882	Gopherus_agassizii
ENSIPUG00000016649	atxn2	60	68.562	ENSGGOG00000002137	ATXN2	59	68.197	Gorilla_gorilla
ENSIPUG00000016649	atxn2	99	69.896	ENSHBUG00000002921	atxn2	97	70.068	Haplochromis_burtoni
ENSIPUG00000016649	atxn2	99	65.728	ENSHCOG00000005278	atxn2	94	66.634	Hippocampus_comes
ENSIPUG00000016649	atxn2	66	53.683	ENSSTOG00000000978	ATXN2	100	51.950	Ictidomys_tridecemlineatus
ENSIPUG00000016649	atxn2	100	68.520	ENSKMAG00000000980	atxn2	97	70.049	Kryptolebias_marmoratus
ENSIPUG00000016649	atxn2	58	60.877	ENSLBEG00000017484	atxn2	94	61.047	Labrus_bergylta
ENSIPUG00000016649	atxn2	100	67.614	ENSLACG00000012531	ATXN2	100	48.677	Latimeria_chalumnae
ENSIPUG00000016649	atxn2	99	72.334	ENSLOCG00000007880	atxn2	99	68.281	Lepisosteus_oculatus
ENSIPUG00000016649	atxn2	64	52.478	ENSLAFG00000007416	ATXN2	98	51.379	Loxodonta_africana
ENSIPUG00000016649	atxn2	95	69.374	ENSMAMG00000019160	atxn2	96	69.246	Mastacembelus_armatus
ENSIPUG00000016649	atxn2	99	69.991	ENSMZEG00005008476	atxn2	97	70.165	Maylandia_zebra
ENSIPUG00000016649	atxn2	64	53.363	ENSMAUG00000008223	-	98	51.020	Mesocricetus_auratus
ENSIPUG00000016649	atxn2	57	53.719	ENSMICG00000013541	ATXN2	99	51.540	Microcebus_murinus
ENSIPUG00000016649	atxn2	70	47.222	ENSMOCG00000005219	Atxn2	98	50.729	Microtus_ochrogaster
ENSIPUG00000016649	atxn2	94	79.298	ENSMMOG00000013189	atxn2	93	79.298	Mola_mola
ENSIPUG00000016649	atxn2	99	66.920	ENSMALG00000018529	atxn2	96	68.079	Monopterus_albus
ENSIPUG00000016649	atxn2	64	53.070	ENSMUSG00000042605	Atxn2	94	58.654	Mus_musculus
ENSIPUG00000016649	atxn2	86	65.803	MGP_PahariEiJ_G0024272	Atxn2	98	51.462	Mus_pahari
ENSIPUG00000016649	atxn2	64	53.801	MGP_SPRETEiJ_G0028690	Atxn2	94	57.692	Mus_spretus
ENSIPUG00000016649	atxn2	93	80.351	ENSNBRG00000015794	atxn2	92	80.351	Neolamprologus_brichardi
ENSIPUG00000016649	atxn2	76	72.727	ENSMEUG00000012244	-	80	72.727	Notamacropus_eugenii
ENSIPUG00000016649	atxn2	96	78.526	ENSONIG00000014521	atxn2	92	78.526	Oreochromis_niloticus
ENSIPUG00000016649	atxn2	93	66.700	ENSORLG00000003606	atxn2	88	77.627	Oryzias_latipes
ENSIPUG00000016649	atxn2	99	66.032	ENSORLG00020000785	atxn2	99	65.403	Oryzias_latipes_hni
ENSIPUG00000016649	atxn2	99	66.098	ENSORLG00015012345	atxn2	97	66.829	Oryzias_latipes_hsok
ENSIPUG00000016649	atxn2	99	66.256	ENSOMEG00000020080	atxn2	97	67.221	Oryzias_melastigma
ENSIPUG00000016649	atxn2	97	71.640	ENSPKIG00000023134	atxn2	100	70.554	Paramormyrops_kingsleyae
ENSIPUG00000016649	atxn2	94	80.000	ENSPMGG00000005074	atxn2	93	80.000	Periophthalmus_magnuspinnatus
ENSIPUG00000016649	atxn2	64	53.363	ENSPEMG00000015340	Atxn2	98	51.020	Peromyscus_maniculatus_bairdii
ENSIPUG00000016649	atxn2	55	57.751	ENSPCIG00000006165	-	94	55.802	Phascolarctos_cinereus
ENSIPUG00000016649	atxn2	97	63.168	ENSPFOG00000005857	atxn2	97	63.557	Poecilia_formosa
ENSIPUG00000016649	atxn2	97	68.780	ENSPLAG00000015241	atxn2	97	68.482	Poecilia_latipinna
ENSIPUG00000016649	atxn2	97	68.683	ENSPMEG00000016681	atxn2	97	68.354	Poecilia_mexicana
ENSIPUG00000016649	atxn2	95	79.795	ENSPREG00000014825	atxn2	93	79.795	Poecilia_reticulata
ENSIPUG00000016649	atxn2	95	68.562	ENSPVAG00000013179	ATXN2	77	66.563	Pteropus_vampyrus
ENSIPUG00000016649	atxn2	54	64.329	ENSPNYG00000016981	atxn2	96	59.393	Pundamilia_nyererei
ENSIPUG00000016649	atxn2	100	78.897	ENSPNAG00000010889	atxn2	100	78.843	Pygocentrus_nattereri
ENSIPUG00000016649	atxn2	93	82.867	ENSSMAG00000004627	atxn2	93	82.867	Scophthalmus_maximus
ENSIPUG00000016649	atxn2	100	68.687	ENSSDUG00000001223	atxn2	97	69.516	Seriola_dumerili
ENSIPUG00000016649	atxn2	69	67.364	ENSSARG00000006291	ATXN2	67	67.364	Sorex_araneus
ENSIPUG00000016649	atxn2	92	80.657	ENSSPAG00000000377	atxn2	89	80.657	Stegastes_partitus
ENSIPUG00000016649	atxn2	95	58.061	ENSSSCG00000009834	ATXN2	94	57.226	Sus_scrofa
ENSIPUG00000016649	atxn2	96	56.954	ENSTGUG00000006497	ATXN2	100	56.927	Taeniopygia_guttata
ENSIPUG00000016649	atxn2	99	72.911	ENSTRUG00000016801	atxn2	91	77.244	Takifugu_rubripes
ENSIPUG00000016649	atxn2	79	66.667	ENSTBEG00000001985	ATXN2	78	66.667	Tupaia_belangeri
ENSIPUG00000016649	atxn2	84	65.552	ENSTTRG00000000952	ATXN2	72	64.353	Tursiops_truncatus
ENSIPUG00000016649	atxn2	87	67.742	ENSVPAG00000005940	ATXN2	92	67.368	Vicugna_pacos
ENSIPUG00000016649	atxn2	58	60.772	ENSXCOG00000010001	atxn2	99	61.290	Xiphophorus_couchianus
ENSIPUG00000016649	atxn2	97	67.895	ENSXMAG00000003481	atxn2	97	68.354	Xiphophorus_maculatus