EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000016694 (Gene tree)
Gene ID: 108260459
Gene Symbol: si:ch211-11k18.4 (1 of many)
Alias: -
Full Name: uncharacterized LOC108260459
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 6972 bases
Position: chr2:5694422-5701393
Accession: 108260459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000024674	MMR_HSR1	PF01926.23	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000025706	-	1495	XM_017460780	ENSIPUP00000024674	448 (aa)	XP_017316269	-

Gene Model

Click here to download ENSIPUG00000016694's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000016694's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000016694	si:ch211-11k18.4	80	79.781	ENSIPUG00000016678	si:ch211-11k18.4	90	79.781
ENSIPUG00000016694	si:ch211-11k18.4	70	63.492	ENSIPUG00000019981	si:dkey-98f17.5	70	63.492

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000016694	si:ch211-11k18.4	81	59.178	ENSAPOG00000010378	si:dkey-98f17.5	85	59.178	Acanthochromis_polyacanthus
ENSIPUG00000016694	si:ch211-11k18.4	89	69.059	ENSAPOG00000018833	si:ch211-11k18.4	89	72.118	Acanthochromis_polyacanthus
ENSIPUG00000016694	si:ch211-11k18.4	84	68.930	ENSACIG00000006696	si:ch211-11k18.4	90	67.079	Amphilophus_citrinellus
ENSIPUG00000016694	si:ch211-11k18.4	83	58.201	ENSACIG00000017719	si:dkey-98f17.5	84	58.201	Amphilophus_citrinellus
ENSIPUG00000016694	si:ch211-11k18.4	81	59.452	ENSAOCG00000008661	si:dkey-98f17.5	81	59.452	Amphiprion_ocellaris
ENSIPUG00000016694	si:ch211-11k18.4	89	69.802	ENSAOCG00000014284	si:ch211-11k18.4	90	69.802	Amphiprion_ocellaris
ENSIPUG00000016694	si:ch211-11k18.4	89	69.554	ENSAPEG00000014910	si:ch211-11k18.4	90	69.554	Amphiprion_percula
ENSIPUG00000016694	si:ch211-11k18.4	81	59.452	ENSAPEG00000022447	si:dkey-98f17.5	81	59.452	Amphiprion_percula
ENSIPUG00000016694	si:ch211-11k18.4	84	70.157	ENSATEG00000004775	si:ch211-11k18.4	90	68.317	Anabas_testudineus
ENSIPUG00000016694	si:ch211-11k18.4	83	58.933	ENSATEG00000007188	si:dkey-98f17.5	84	58.933	Anabas_testudineus
ENSIPUG00000016694	si:ch211-11k18.4	81	59.452	ENSACAG00000028632	-	85	58.442	Anolis_carolinensis
ENSIPUG00000016694	si:ch211-11k18.4	83	58.777	ENSACLG00000001308	si:dkey-98f17.5	84	58.777	Astatotilapia_calliptera
ENSIPUG00000016694	si:ch211-11k18.4	84	70.157	ENSACLG00000007907	si:ch211-11k18.4	90	68.069	Astatotilapia_calliptera
ENSIPUG00000016694	si:ch211-11k18.4	84	58.115	ENSAMXG00000001190	si:dkey-98f17.5	85	58.115	Astyanax_mexicanus
ENSIPUG00000016694	si:ch211-11k18.4	88	70.927	ENSAMXG00000017817	si:ch211-11k18.4	89	70.927	Astyanax_mexicanus
ENSIPUG00000016694	si:ch211-11k18.4	80	59.178	ENSCING00000020807	-	96	59.178	Ciona_intestinalis
ENSIPUG00000016694	si:ch211-11k18.4	82	57.682	ENSCSAVG00000009987	-	88	55.696	Ciona_savignyi
ENSIPUG00000016694	si:ch211-11k18.4	81	68.293	ENSCSEG00000017661	si:ch211-11k18.4	89	64.851	Cynoglossus_semilaevis
ENSIPUG00000016694	si:ch211-11k18.4	83	58.777	ENSCSEG00000017512	si:dkey-98f17.5	86	57.909	Cynoglossus_semilaevis
ENSIPUG00000016694	si:ch211-11k18.4	85	70.984	ENSCVAG00000015346	si:ch211-11k18.4	90	70.789	Cyprinodon_variegatus
ENSIPUG00000016694	si:ch211-11k18.4	80	59.557	ENSCVAG00000011351	si:dkey-98f17.5	81	59.557	Cyprinodon_variegatus
ENSIPUG00000016694	si:ch211-11k18.4	84	73.037	ENSDARG00000087869	si:ch211-11k18.4	100	83.673	Danio_rerio
ENSIPUG00000016694	si:ch211-11k18.4	83	57.447	ENSDARG00000068863	si:dkey-98f17.5	85	57.447	Danio_rerio
ENSIPUG00000016694	si:ch211-11k18.4	78	51.831	ENSEBUG00000007620	si:dkey-98f17.5	93	51.831	Eptatretus_burgeri
ENSIPUG00000016694	si:ch211-11k18.4	83	57.672	ENSELUG00000003365	si:dkey-98f17.5	83	63.312	Esox_lucius
ENSIPUG00000016694	si:ch211-11k18.4	89	69.307	ENSFHEG00000019820	si:ch211-11k18.4	90	69.307	Fundulus_heteroclitus
ENSIPUG00000016694	si:ch211-11k18.4	80	59.780	ENSFHEG00000012744	si:dkey-98f17.5	81	59.780	Fundulus_heteroclitus
ENSIPUG00000016694	si:ch211-11k18.4	89	64.109	ENSGMOG00000003492	si:ch211-11k18.4	100	64.356	Gadus_morhua
ENSIPUG00000016694	si:ch211-11k18.4	84	68.586	ENSGAFG00000005677	si:ch211-11k18.4	90	66.584	Gambusia_affinis
ENSIPUG00000016694	si:ch211-11k18.4	80	59.444	ENSGAFG00000012362	si:dkey-98f17.5	72	59.444	Gambusia_affinis
ENSIPUG00000016694	si:ch211-11k18.4	53	71.730	ENSGACG00000009399	si:dkey-98f17.5	92	71.730	Gasterosteus_aculeatus
ENSIPUG00000016694	si:ch211-11k18.4	84	70.681	ENSGACG00000013134	si:ch211-11k18.4	100	68.812	Gasterosteus_aculeatus
ENSIPUG00000016694	si:ch211-11k18.4	83	59.043	ENSHBUG00000008331	si:dkey-98f17.5	84	59.043	Haplochromis_burtoni
ENSIPUG00000016694	si:ch211-11k18.4	84	70.419	ENSHBUG00000020638	si:ch211-11k18.4	90	68.317	Haplochromis_burtoni
ENSIPUG00000016694	si:ch211-11k18.4	81	59.615	ENSHCOG00000016505	si:dkey-98f17.5	82	59.615	Hippocampus_comes
ENSIPUG00000016694	si:ch211-11k18.4	89	67.079	ENSHCOG00000014773	si:ch211-11k18.4	90	68.069	Hippocampus_comes
ENSIPUG00000016694	si:ch211-11k18.4	80	59.003	ENSKMAG00000014997	si:dkey-98f17.5	81	59.003	Kryptolebias_marmoratus
ENSIPUG00000016694	si:ch211-11k18.4	85	69.689	ENSKMAG00000009327	si:ch211-11k18.4	90	68.317	Kryptolebias_marmoratus
ENSIPUG00000016694	si:ch211-11k18.4	83	57.713	ENSLBEG00000012756	si:dkey-98f17.5	84	57.713	Labrus_bergylta
ENSIPUG00000016694	si:ch211-11k18.4	85	59.580	ENSLACG00000004899	-	85	59.580	Latimeria_chalumnae
ENSIPUG00000016694	si:ch211-11k18.4	84	56.771	ENSLACG00000017433	si:dkey-98f17.5	83	57.031	Latimeria_chalumnae
ENSIPUG00000016694	si:ch211-11k18.4	83	61.170	ENSLACG00000006280	si:ch211-11k18.4	89	60.149	Latimeria_chalumnae
ENSIPUG00000016694	si:ch211-11k18.4	85	57.031	ENSLOCG00000003824	si:dkey-98f17.5	85	57.031	Lepisosteus_oculatus
ENSIPUG00000016694	si:ch211-11k18.4	84	70.942	ENSMAMG00000002536	si:ch211-11k18.4	93	69.059	Mastacembelus_armatus
ENSIPUG00000016694	si:ch211-11k18.4	83	58.730	ENSMAMG00000014528	si:dkey-98f17.5	84	58.730	Mastacembelus_armatus
ENSIPUG00000016694	si:ch211-11k18.4	84	69.895	ENSMZEG00005008941	si:ch211-11k18.4	90	67.822	Maylandia_zebra
ENSIPUG00000016694	si:ch211-11k18.4	83	59.043	ENSMZEG00005016572	si:dkey-98f17.5	84	59.043	Maylandia_zebra
ENSIPUG00000016694	si:ch211-11k18.4	89	64.851	ENSMMOG00000012485	si:ch211-11k18.4	89	64.851	Mola_mola
ENSIPUG00000016694	si:ch211-11k18.4	83	58.621	ENSMALG00000012761	si:dkey-98f17.5	86	58.621	Monopterus_albus
ENSIPUG00000016694	si:ch211-11k18.4	84	70.942	ENSMALG00000019735	si:ch211-11k18.4	90	68.812	Monopterus_albus
ENSIPUG00000016694	si:ch211-11k18.4	84	70.681	ENSNBRG00000002220	si:ch211-11k18.4	92	68.564	Neolamprologus_brichardi
ENSIPUG00000016694	si:ch211-11k18.4	83	59.043	ENSNBRG00000006068	si:dkey-98f17.5	84	59.043	Neolamprologus_brichardi
ENSIPUG00000016694	si:ch211-11k18.4	84	70.681	ENSONIG00000019412	si:ch211-11k18.4	90	68.564	Oreochromis_niloticus
ENSIPUG00000016694	si:ch211-11k18.4	83	59.043	ENSONIG00000013568	si:dkey-98f17.5	84	59.043	Oreochromis_niloticus
ENSIPUG00000016694	si:ch211-11k18.4	81	57.576	ENSORLG00000007958	si:dkey-98f17.5	84	57.576	Oryzias_latipes
ENSIPUG00000016694	si:ch211-11k18.4	85	69.689	ENSORLG00000012015	si:ch211-11k18.4	90	68.317	Oryzias_latipes
ENSIPUG00000016694	si:ch211-11k18.4	84	69.531	ENSORLG00020012386	si:ch211-11k18.4	90	67.822	Oryzias_latipes_hni
ENSIPUG00000016694	si:ch211-11k18.4	83	57.181	ENSORLG00020013350	si:dkey-98f17.5	84	57.181	Oryzias_latipes_hni
ENSIPUG00000016694	si:ch211-11k18.4	83	57.447	ENSORLG00015002000	si:dkey-98f17.5	84	57.447	Oryzias_latipes_hsok
ENSIPUG00000016694	si:ch211-11k18.4	85	69.689	ENSORLG00015022862	si:ch211-11k18.4	90	68.317	Oryzias_latipes_hsok
ENSIPUG00000016694	si:ch211-11k18.4	83	57.181	ENSOMEG00000003154	si:dkey-98f17.5	87	57.181	Oryzias_melastigma
ENSIPUG00000016694	si:ch211-11k18.4	85	68.912	ENSOMEG00000018686	si:ch211-11k18.4	90	67.574	Oryzias_melastigma
ENSIPUG00000016694	si:ch211-11k18.4	84	68.421	ENSPKIG00000023918	-	88	66.667	Paramormyrops_kingsleyae
ENSIPUG00000016694	si:ch211-11k18.4	88	56.784	ENSPKIG00000024621	si:dkey-98f17.5	89	56.784	Paramormyrops_kingsleyae
ENSIPUG00000016694	si:ch211-11k18.4	83	70.899	ENSPKIG00000018807	si:ch211-11k18.4	90	70.050	Paramormyrops_kingsleyae
ENSIPUG00000016694	si:ch211-11k18.4	89	69.307	ENSPMGG00000016507	si:ch211-11k18.4	90	69.307	Periophthalmus_magnuspinnatus
ENSIPUG00000016694	si:ch211-11k18.4	83	58.511	ENSPMGG00000019065	si:dkey-98f17.5	84	58.511	Periophthalmus_magnuspinnatus
ENSIPUG00000016694	si:ch211-11k18.4	85	70.466	ENSPFOG00000007976	si:ch211-11k18.4	88	69.674	Poecilia_formosa
ENSIPUG00000016694	si:ch211-11k18.4	80	58.791	ENSPFOG00000015142	si:dkey-98f17.5	81	58.791	Poecilia_formosa
ENSIPUG00000016694	si:ch211-11k18.4	80	59.003	ENSPLAG00000003709	si:dkey-98f17.5	81	59.003	Poecilia_latipinna
ENSIPUG00000016694	si:ch211-11k18.4	85	70.466	ENSPLAG00000019794	si:ch211-11k18.4	88	69.674	Poecilia_latipinna
ENSIPUG00000016694	si:ch211-11k18.4	85	70.466	ENSPMEG00000024198	si:ch211-11k18.4	92	69.674	Poecilia_mexicana
ENSIPUG00000016694	si:ch211-11k18.4	80	59.280	ENSPMEG00000018709	si:dkey-98f17.5	76	59.280	Poecilia_mexicana
ENSIPUG00000016694	si:ch211-11k18.4	89	67.901	ENSPREG00000015319	si:ch211-11k18.4	92	67.901	Poecilia_reticulata
ENSIPUG00000016694	si:ch211-11k18.4	80	58.449	ENSPREG00000000708	si:dkey-98f17.5	82	58.449	Poecilia_reticulata
ENSIPUG00000016694	si:ch211-11k18.4	84	70.419	ENSPNYG00000017099	si:ch211-11k18.4	90	68.317	Pundamilia_nyererei
ENSIPUG00000016694	si:ch211-11k18.4	83	59.043	ENSPNYG00000017266	si:dkey-98f17.5	84	59.043	Pundamilia_nyererei
ENSIPUG00000016694	si:ch211-11k18.4	85	72.280	ENSPNAG00000022138	si:ch211-11k18.4	89	71.429	Pygocentrus_nattereri
ENSIPUG00000016694	si:ch211-11k18.4	84	57.592	ENSPNAG00000021352	si:dkey-98f17.5	85	57.592	Pygocentrus_nattereri
ENSIPUG00000016694	si:ch211-11k18.4	88	54.887	ENSSFOG00015017965	si:dkey-98f17.5	89	54.887	Scleropages_formosus
ENSIPUG00000016694	si:ch211-11k18.4	89	67.990	ENSSFOG00015000985	si:ch211-11k18.4	85	67.990	Scleropages_formosus
ENSIPUG00000016694	si:ch211-11k18.4	85	69.171	ENSSMAG00000009651	si:ch211-11k18.4	90	67.822	Scophthalmus_maximus
ENSIPUG00000016694	si:ch211-11k18.4	88	56.030	ENSSMAG00000011905	si:dkey-98f17.5	90	56.030	Scophthalmus_maximus
ENSIPUG00000016694	si:ch211-11k18.4	83	57.937	ENSSDUG00000013457	si:dkey-98f17.5	84	57.937	Seriola_dumerili
ENSIPUG00000016694	si:ch211-11k18.4	89	68.812	ENSSDUG00000016411	si:ch211-11k18.4	90	68.812	Seriola_dumerili
ENSIPUG00000016694	si:ch211-11k18.4	89	68.564	ENSSLDG00000019145	si:ch211-11k18.4	90	68.564	Seriola_lalandi_dorsalis
ENSIPUG00000016694	si:ch211-11k18.4	83	57.447	ENSSLDG00000025395	si:dkey-98f17.5	84	57.447	Seriola_lalandi_dorsalis
ENSIPUG00000016694	si:ch211-11k18.4	71	61.491	ENSSPUG00000010096	-	87	59.884	Sphenodon_punctatus
ENSIPUG00000016694	si:ch211-11k18.4	81	59.452	ENSSPAG00000018800	si:dkey-98f17.5	81	59.452	Stegastes_partitus
ENSIPUG00000016694	si:ch211-11k18.4	85	70.725	ENSSPAG00000010697	si:ch211-11k18.4	90	69.554	Stegastes_partitus
ENSIPUG00000016694	si:ch211-11k18.4	80	59.167	ENSTRUG00000021287	si:dkey-98f17.5	80	59.167	Takifugu_rubripes
ENSIPUG00000016694	si:ch211-11k18.4	85	70.984	ENSTRUG00000020291	si:ch211-11k18.4	90	69.554	Takifugu_rubripes
ENSIPUG00000016694	si:ch211-11k18.4	88	59.553	ENSXETG00000031783	-	89	59.553	Xenopus_tropicalis
ENSIPUG00000016694	si:ch211-11k18.4	74	63.253	ENSXCOG00000017002	si:dkey-98f17.5	74	63.253	Xiphophorus_couchianus
ENSIPUG00000016694	si:ch211-11k18.4	81	70.732	ENSXCOG00000018094	si:ch211-11k18.4	83	70.732	Xiphophorus_couchianus
ENSIPUG00000016694	si:ch211-11k18.4	80	59.722	ENSXMAG00000007688	si:dkey-98f17.5	76	59.722	Xiphophorus_maculatus
ENSIPUG00000016694	si:ch211-11k18.4	85	69.689	ENSXMAG00000021235	si:ch211-11k18.4	90	68.317	Xiphophorus_maculatus