EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000016780 (Gene tree)
Gene ID: -
Gene Symbol: slbp
Alias: cb157|sb:cb157|si:dkey-102m7.2
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 4292 bases
Position: chr8:4188974-4193265
Accession: 108268671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000024802	SLBP_RNA_bind	PF15247.6	6.6e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000025837	-	783	XM_017473749	ENSIPUP00000024802	260 (aa)	XP_017329238	-

Gene Model

Click here to download ENSIPUG00000016780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000016780's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000016780	slbp	72	66.138	ENSG00000163950	SLBP	81	59.868	Homo_sapiens
ENSIPUG00000016780	slbp	92	55.512	ENSAPOG00000004953	slbp	89	55.512	Acanthochromis_polyacanthus
ENSIPUG00000016780	slbp	59	71.242	ENSAMEG00000016915	SLBP	73	69.565	Ailuropoda_melanoleuca
ENSIPUG00000016780	slbp	91	55.422	ENSACIG00000022308	slbp	83	60.829	Amphilophus_citrinellus
ENSIPUG00000016780	slbp	88	55.967	ENSAOCG00000024545	slbp	85	55.967	Amphiprion_ocellaris
ENSIPUG00000016780	slbp	92	54.331	ENSAPEG00000017629	slbp	89	54.331	Amphiprion_percula
ENSIPUG00000016780	slbp	88	58.367	ENSATEG00000016358	slbp	75	63.134	Anabas_testudineus
ENSIPUG00000016780	slbp	61	64.417	ENSAPLG00000015989	-	73	67.901	Anas_platyrhynchos
ENSIPUG00000016780	slbp	72	63.077	ENSANAG00000034769	SLBP	65	70.588	Aotus_nancymaae
ENSIPUG00000016780	slbp	87	55.187	ENSACLG00000007036	-	78	58.559	Astatotilapia_calliptera
ENSIPUG00000016780	slbp	92	68.826	ENSAMXG00000014527	slbp	91	68.826	Astyanax_mexicanus
ENSIPUG00000016780	slbp	74	65.306	ENSBTAG00000001328	SLBP	70	64.796	Bos_taurus
ENSIPUG00000016780	slbp	84	58.407	ENSCJAG00000001790	SLBP	69	61.340	Callithrix_jacchus
ENSIPUG00000016780	slbp	74	64.796	ENSCAFG00000015016	SLBP	70	64.796	Canis_familiaris
ENSIPUG00000016780	slbp	74	64.796	ENSCAFG00020012334	SLBP	70	64.796	Canis_lupus_dingo
ENSIPUG00000016780	slbp	74	64.975	ENSCHIG00000019364	SLBP	70	64.467	Capra_hircus
ENSIPUG00000016780	slbp	62	70.988	ENSTSYG00000000376	SLBP	65	71.242	Carlito_syrichta
ENSIPUG00000016780	slbp	65	67.052	ENSCPOG00000000031	SLBP	69	64.646	Cavia_porcellus
ENSIPUG00000016780	slbp	72	66.138	ENSCATG00000029173	SLBP	65	70.588	Cercocebus_atys
ENSIPUG00000016780	slbp	63	69.461	ENSCLAG00000008157	SLBP	70	65.816	Chinchilla_lanigera
ENSIPUG00000016780	slbp	64	51.190	ENSCSAG00000015628	SLBP	60	51.705	Chlorocebus_sabaeus
ENSIPUG00000016780	slbp	74	62.500	ENSCPBG00000000746	SLBP	70	62.500	Chrysemys_picta_bellii
ENSIPUG00000016780	slbp	59	71.242	ENSCANG00000041008	SLBP	72	70.588	Colobus_angolensis_palliatus
ENSIPUG00000016780	slbp	74	67.172	ENSCGRG00001009760	-	70	67.172	Cricetulus_griseus_chok1gshd
ENSIPUG00000016780	slbp	74	66.667	ENSCGRG00001012991	-	71	66.667	Cricetulus_griseus_chok1gshd
ENSIPUG00000016780	slbp	74	67.172	ENSCGRG00000004506	Slbp	70	67.172	Cricetulus_griseus_crigri
ENSIPUG00000016780	slbp	90	57.317	ENSCSEG00000020337	-	75	63.380	Cynoglossus_semilaevis
ENSIPUG00000016780	slbp	82	57.399	ENSCVAG00000019592	-	80	58.525	Cyprinodon_variegatus
ENSIPUG00000016780	slbp	92	64.372	ENSDARG00000100558	slbp	81	64.372	Danio_rerio
ENSIPUG00000016780	slbp	74	59.406	ENSDNOG00000047539	SLBP	72	61.386	Dasypus_novemcinctus
ENSIPUG00000016780	slbp	61	65.217	ENSDORG00000003028	Slbp	92	68.212	Dipodomys_ordii
ENSIPUG00000016780	slbp	73	58.247	ENSETEG00000004641	SLBP	83	61.421	Echinops_telfairi
ENSIPUG00000016780	slbp	52	72.263	ENSEASG00005022714	SLBP	70	68.613	Equus_asinus_asinus
ENSIPUG00000016780	slbp	72	66.129	ENSECAG00000011689	SLBP	59	66.129	Equus_caballus
ENSIPUG00000016780	slbp	77	68.396	ENSELUG00000012854	slbp	75	68.396	Esox_lucius
ENSIPUG00000016780	slbp	63	68.452	ENSFCAG00000000169	SLBP	67	69.565	Felis_catus
ENSIPUG00000016780	slbp	74	59.296	ENSFALG00000010003	-	71	59.296	Ficedula_albicollis
ENSIPUG00000016780	slbp	64	69.231	ENSFDAG00000007592	SLBP	75	65.816	Fukomys_damarensis
ENSIPUG00000016780	slbp	90	54.286	ENSFHEG00000007497	slbp	78	57.009	Fundulus_heteroclitus
ENSIPUG00000016780	slbp	57	66.013	ENSGMOG00000015352	slbp	97	66.013	Gadus_morhua
ENSIPUG00000016780	slbp	74	62.562	ENSGALG00000015712	SLBP	71	62.562	Gallus_gallus
ENSIPUG00000016780	slbp	91	55.285	ENSGAFG00000019577	slbp	79	60.287	Gambusia_affinis
ENSIPUG00000016780	slbp	79	58.685	ENSGACG00000019596	slbp	83	59.346	Gasterosteus_aculeatus
ENSIPUG00000016780	slbp	85	56.195	ENSGAGG00000012096	SLBP	80	62.000	Gopherus_agassizii
ENSIPUG00000016780	slbp	72	66.138	ENSGGOG00000003167	SLBP	65	70.588	Gorilla_gorilla
ENSIPUG00000016780	slbp	87	55.187	ENSHBUG00000003338	-	78	58.559	Haplochromis_burtoni
ENSIPUG00000016780	slbp	53	66.901	ENSHGLG00000005955	-	90	56.383	Heterocephalus_glaber_female
ENSIPUG00000016780	slbp	72	56.316	ENSHGLG00000008313	-	70	54.592	Heterocephalus_glaber_female
ENSIPUG00000016780	slbp	63	63.473	ENSHGLG00000010461	-	72	57.292	Heterocephalus_glaber_female
ENSIPUG00000016780	slbp	62	69.565	ENSHGLG00100014018	-	91	64.894	Heterocephalus_glaber_male
ENSIPUG00000016780	slbp	63	63.473	ENSHGLG00100014906	-	72	57.292	Heterocephalus_glaber_male
ENSIPUG00000016780	slbp	72	57.368	ENSHGLG00100010510	-	70	55.612	Heterocephalus_glaber_male
ENSIPUG00000016780	slbp	94	54.331	ENSHCOG00000013425	slbp	74	62.559	Hippocampus_comes
ENSIPUG00000016780	slbp	67	67.978	ENSSTOG00000003262	SLBP	70	65.990	Ictidomys_tridecemlineatus
ENSIPUG00000016780	slbp	74	66.162	ENSJJAG00000020549	-	70	65.657	Jaculus_jaculus
ENSIPUG00000016780	slbp	74	66.162	ENSJJAG00000002394	-	71	65.657	Jaculus_jaculus
ENSIPUG00000016780	slbp	77	60.465	ENSKMAG00000008187	slbp	76	61.111	Kryptolebias_marmoratus
ENSIPUG00000016780	slbp	88	59.833	ENSLBEG00000024709	slbp	85	59.833	Labrus_bergylta
ENSIPUG00000016780	slbp	82	56.109	ENSLACG00000014623	SLBP	78	56.164	Latimeria_chalumnae
ENSIPUG00000016780	slbp	85	62.609	ENSLOCG00000011027	slbp	72	64.679	Lepisosteus_oculatus
ENSIPUG00000016780	slbp	73	63.918	ENSLAFG00000012933	SLBP	82	62.500	Loxodonta_africana
ENSIPUG00000016780	slbp	72	66.138	ENSMFAG00000030130	SLBP	60	65.608	Macaca_fascicularis
ENSIPUG00000016780	slbp	72	63.776	ENSMMUG00000032303	SLBP	68	70.588	Macaca_mulatta
ENSIPUG00000016780	slbp	53	57.823	ENSMNEG00000008082	SLBP	63	55.782	Macaca_nemestrina
ENSIPUG00000016780	slbp	67	65.143	ENSMLEG00000024639	SLBP	70	64.571	Mandrillus_leucophaeus
ENSIPUG00000016780	slbp	88	55.738	ENSMAMG00000001046	-	76	59.259	Mastacembelus_armatus
ENSIPUG00000016780	slbp	87	55.187	ENSMZEG00005017261	-	78	58.559	Maylandia_zebra
ENSIPUG00000016780	slbp	61	69.565	ENSMGAG00000013085	SLBP	73	69.565	Meleagris_gallopavo
ENSIPUG00000016780	slbp	74	67.172	ENSMAUG00000009490	Slbp	70	67.172	Mesocricetus_auratus
ENSIPUG00000016780	slbp	62	69.753	ENSMICG00000014244	SLBP	65	69.935	Microcebus_murinus
ENSIPUG00000016780	slbp	74	67.172	ENSMOCG00000015826	Slbp	86	67.368	Microtus_ochrogaster
ENSIPUG00000016780	slbp	75	61.111	ENSMMOG00000010181	slbp	84	59.804	Mola_mola
ENSIPUG00000016780	slbp	72	58.115	ENSMODG00000004304	SLBP	77	55.446	Monodelphis_domestica
ENSIPUG00000016780	slbp	92	55.686	ENSMALG00000013883	-	62	54.902	Monopterus_albus
ENSIPUG00000016780	slbp	74	67.172	MGP_CAROLIEiJ_G0027117	Slbp	83	67.368	Mus_caroli
ENSIPUG00000016780	slbp	74	67.172	ENSMUSG00000004642	Slbp	84	67.368	Mus_musculus
ENSIPUG00000016780	slbp	74	67.172	MGP_PahariEiJ_G0016901	Slbp	83	67.368	Mus_pahari
ENSIPUG00000016780	slbp	74	67.172	MGP_SPRETEiJ_G0028113	Slbp	84	67.368	Mus_spretus
ENSIPUG00000016780	slbp	61	66.460	ENSMLUG00000004425	SLBP	68	66.460	Myotis_lucifugus
ENSIPUG00000016780	slbp	73	65.285	ENSNGAG00000020799	Slbp	68	65.285	Nannospalax_galili
ENSIPUG00000016780	slbp	85	55.274	ENSNBRG00000006044	-	83	57.658	Neolamprologus_brichardi
ENSIPUG00000016780	slbp	72	63.776	ENSNLEG00000000048	SLBP	65	70.588	Nomascus_leucogenys
ENSIPUG00000016780	slbp	59	64.706	ENSMEUG00000002501	SLBP	91	60.976	Notamacropus_eugenii
ENSIPUG00000016780	slbp	63	68.862	ENSODEG00000012641	SLBP	71	64.286	Octodon_degus
ENSIPUG00000016780	slbp	97	51.493	ENSONIG00000017469	-	78	59.009	Oreochromis_niloticus
ENSIPUG00000016780	slbp	64	65.294	ENSOANG00000014243	SLBP	73	65.294	Ornithorhynchus_anatinus
ENSIPUG00000016780	slbp	82	58.904	ENSORLG00000024887	-	79	59.722	Oryzias_latipes
ENSIPUG00000016780	slbp	81	59.908	ENSORLG00020007798	slbp	79	60.185	Oryzias_latipes_hni
ENSIPUG00000016780	slbp	81	59.447	ENSORLG00015016656	slbp	78	59.722	Oryzias_latipes_hsok
ENSIPUG00000016780	slbp	81	60.829	ENSOMEG00000010818	slbp	78	61.111	Oryzias_melastigma
ENSIPUG00000016780	slbp	60	70.064	ENSOGAG00000009750	SLBP	68	63.684	Otolemur_garnettii
ENSIPUG00000016780	slbp	61	70.186	ENSOARG00000016090	SLBP	73	67.081	Ovis_aries
ENSIPUG00000016780	slbp	72	66.138	ENSPPAG00000033300	SLBP	65	70.588	Pan_paniscus
ENSIPUG00000016780	slbp	63	67.857	ENSPPRG00000016897	SLBP	77	63.776	Panthera_pardus
ENSIPUG00000016780	slbp	52	70.803	ENSPTIG00000015057	SLBP	70	67.883	Panthera_tigris_altaica
ENSIPUG00000016780	slbp	72	66.138	ENSPTRG00000015832	SLBP	65	70.588	Pan_troglodytes
ENSIPUG00000016780	slbp	71	64.062	ENSPANG00000004932	SLBP	65	70.588	Papio_anubis
ENSIPUG00000016780	slbp	88	60.924	ENSPKIG00000006183	slbp	73	64.623	Paramormyrops_kingsleyae
ENSIPUG00000016780	slbp	77	58.768	ENSPMGG00000017684	-	92	58.768	Periophthalmus_magnuspinnatus
ENSIPUG00000016780	slbp	74	67.172	ENSPEMG00000018369	Slbp	70	67.172	Peromyscus_maniculatus_bairdii
ENSIPUG00000016780	slbp	74	57.895	ENSPCIG00000013575	SLBP	60	57.895	Phascolarctos_cinereus
ENSIPUG00000016780	slbp	91	56.098	ENSPFOG00000000462	slbp	89	56.098	Poecilia_formosa
ENSIPUG00000016780	slbp	91	56.098	ENSPLAG00000008300	slbp	89	56.098	Poecilia_latipinna
ENSIPUG00000016780	slbp	91	56.098	ENSPMEG00000020807	slbp	89	56.098	Poecilia_mexicana
ENSIPUG00000016780	slbp	91	55.691	ENSPREG00000004561	slbp	89	55.691	Poecilia_reticulata
ENSIPUG00000016780	slbp	72	66.138	ENSPPYG00000014529	SLBP	73	62.319	Pongo_abelii
ENSIPUG00000016780	slbp	62	69.753	ENSPCOG00000017399	SLBP	65	69.935	Propithecus_coquereli
ENSIPUG00000016780	slbp	73	58.049	ENSPVAG00000002807	SLBP	77	60.000	Pteropus_vampyrus
ENSIPUG00000016780	slbp	87	55.187	ENSPNYG00000005451	-	78	58.559	Pundamilia_nyererei
ENSIPUG00000016780	slbp	89	73.222	ENSPNAG00000018503	slbp	90	67.717	Pygocentrus_nattereri
ENSIPUG00000016780	slbp	74	67.172	ENSRNOG00000037162	Slbp	70	67.172	Rattus_norvegicus
ENSIPUG00000016780	slbp	72	66.138	ENSRBIG00000039159	SLBP	65	70.588	Rhinopithecus_bieti
ENSIPUG00000016780	slbp	72	66.138	ENSRROG00000030081	SLBP	70	65.608	Rhinopithecus_roxellana
ENSIPUG00000016780	slbp	50	74.419	ENSSBOG00000033897	SLBP	68	70.543	Saimiri_boliviensis_boliviensis
ENSIPUG00000016780	slbp	74	57.416	ENSSHAG00000013939	SLBP	70	59.330	Sarcophilus_harrisii
ENSIPUG00000016780	slbp	88	61.373	ENSSFOG00015019429	slbp	73	67.488	Scleropages_formosus
ENSIPUG00000016780	slbp	92	54.118	ENSSMAG00000016028	-	89	54.118	Scophthalmus_maximus
ENSIPUG00000016780	slbp	91	56.452	ENSSDUG00000000855	-	89	57.028	Seriola_dumerili
ENSIPUG00000016780	slbp	87	39.662	ENSSLDG00000007554	-	67	39.631	Seriola_lalandi_dorsalis
ENSIPUG00000016780	slbp	53	59.722	ENSSLDG00000022893	-	84	60.690	Seriola_lalandi_dorsalis
ENSIPUG00000016780	slbp	87	50.206	ENSSPUG00000016007	SLBP	73	57.143	Sphenodon_punctatus
ENSIPUG00000016780	slbp	88	56.379	ENSSPAG00000004021	slbp	84	60.092	Stegastes_partitus
ENSIPUG00000016780	slbp	74	65.306	ENSSSCG00000008676	SLBP	70	64.796	Sus_scrofa
ENSIPUG00000016780	slbp	74	59.091	ENSTGUG00000010626	-	75	59.596	Taeniopygia_guttata
ENSIPUG00000016780	slbp	92	56.048	ENSTRUG00000000688	slbp	89	56.627	Takifugu_rubripes
ENSIPUG00000016780	slbp	88	56.223	ENSTNIG00000000484	-	82	60.377	Tetraodon_nigroviridis
ENSIPUG00000016780	slbp	60	66.038	ENSTTRG00000004010	-	89	63.354	Tursiops_truncatus
ENSIPUG00000016780	slbp	60	71.069	ENSTTRG00000010901	-	74	67.702	Tursiops_truncatus
ENSIPUG00000016780	slbp	72	65.957	ENSUAMG00000012990	SLBP	69	64.796	Ursus_americanus
ENSIPUG00000016780	slbp	50	72.868	ENSUMAG00000006119	SLBP	74	68.613	Ursus_maritimus
ENSIPUG00000016780	slbp	74	63.776	ENSVVUG00000015578	-	70	63.776	Vulpes_vulpes
ENSIPUG00000016780	slbp	78	55.825	ENSXETG00000003876	slbp	74	58.947	Xenopus_tropicalis
ENSIPUG00000016780	slbp	85	56.466	ENSXCOG00000008275	slbp	81	58.796	Xiphophorus_couchianus
ENSIPUG00000016780	slbp	94	54.941	ENSXMAG00000001331	-	90	54.941	Xiphophorus_maculatus