EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000016782 (Gene tree)
Gene ID: 108277913
Gene Symbol: mrm3
Alias: rnmtl1|rnmtl1a|zgc:112452
Full Name: mitochondrial rRNA methyltransferase 3
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 6181 bases
Position: chr17:21884332-21890512
Accession: 108277913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000024808	SpoU_methylase	PF00588.19	5.2e-18	1	1
ENSIPUP00000024817	SpoU_methylase	PF00588.19	6.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000025851	-	1350	XM_017490968	ENSIPUP00000024817	449 (aa)	XP_017346457	A0A2D0SUU0
ENSIPUT00000025842	-	1254	-	ENSIPUP00000024808	417 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000016782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000016782's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000016782	mrm3	90	44.366	ENSIPUG00000005839	mrm3b	73	51.220

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000016782	mrm3	100	50.749	ENSAPOG00000002497	mrm3b	99	50.749	Acanthochromis_polyacanthus
ENSIPUG00000016782	mrm3	98	54.525	ENSACIG00000007921	mrm3b	97	53.863	Amphilophus_citrinellus
ENSIPUG00000016782	mrm3	98	54.447	ENSAOCG00000023615	mrm3b	97	54.013	Amphiprion_ocellaris
ENSIPUG00000016782	mrm3	98	54.367	ENSAPEG00000009402	mrm3b	97	53.930	Amphiprion_percula
ENSIPUG00000016782	mrm3	99	50.216	ENSATEG00000022280	mrm3b	96	47.204	Anabas_testudineus
ENSIPUG00000016782	mrm3	94	44.292	ENSACAG00000015977	-	81	50.606	Anolis_carolinensis
ENSIPUG00000016782	mrm3	98	52.851	ENSACLG00000005833	mrm3b	95	52.193	Astatotilapia_calliptera
ENSIPUG00000016782	mrm3	71	51.170	ENSAMXG00000044018	mrm3b	76	50.877	Astyanax_mexicanus
ENSIPUG00000016782	mrm3	99	60.899	ENSAMXG00000030559	mrm3a	98	60.899	Astyanax_mexicanus
ENSIPUG00000016782	mrm3	92	47.170	ENSBTAG00000019162	MRM3	90	47.761	Bos_taurus
ENSIPUG00000016782	mrm3	91	48.750	ENSCPBG00000015794	-	69	54.079	Chrysemys_picta_bellii
ENSIPUG00000016782	mrm3	99	49.356	ENSCSEG00000013521	mrm3b	98	49.571	Cynoglossus_semilaevis
ENSIPUG00000016782	mrm3	97	42.706	ENSDARG00000069082	mrm3b	74	51.929	Danio_rerio
ENSIPUG00000016782	mrm3	99	61.124	ENSDARG00000016543	mrm3a	98	61.048	Danio_rerio
ENSIPUG00000016782	mrm3	82	30.990	FBgn0036889	CG14100	86	30.591	Drosophila_melanogaster
ENSIPUG00000016782	mrm3	99	50.427	ENSFHEG00000003298	mrm3b	99	51.709	Fundulus_heteroclitus
ENSIPUG00000016782	mrm3	98	50.773	ENSGAFG00000012768	mrm3b	97	51.778	Gambusia_affinis
ENSIPUG00000016782	mrm3	99	52.790	ENSHBUG00000017040	mrm3b	97	52.146	Haplochromis_burtoni
ENSIPUG00000016782	mrm3	96	51.852	ENSHCOG00000015618	mrm3b	80	58.092	Hippocampus_comes
ENSIPUG00000016782	mrm3	98	53.111	ENSKMAG00000019066	mrm3b	97	53.452	Kryptolebias_marmoratus
ENSIPUG00000016782	mrm3	99	52.268	ENSLBEG00000021262	mrm3b	99	52.052	Labrus_bergylta
ENSIPUG00000016782	mrm3	94	52.620	ENSMAMG00000018298	mrm3b	91	53.555	Mastacembelus_armatus
ENSIPUG00000016782	mrm3	98	52.838	ENSMZEG00005007844	mrm3b	96	52.183	Maylandia_zebra
ENSIPUG00000016782	mrm3	99	54.382	ENSMALG00000017429	mrm3b	98	54.382	Monopterus_albus
ENSIPUG00000016782	mrm3	99	52.298	ENSNBRG00000020148	mrm3b	97	51.641	Neolamprologus_brichardi
ENSIPUG00000016782	mrm3	98	53.187	ENSONIG00000013152	mrm3b	98	52.723	Oreochromis_niloticus
ENSIPUG00000016782	mrm3	98	52.980	ENSORLG00000028441	mrm3b	97	52.980	Oryzias_latipes
ENSIPUG00000016782	mrm3	98	52.097	ENSORLG00020009301	mrm3b	97	52.097	Oryzias_latipes_hni
ENSIPUG00000016782	mrm3	98	52.318	ENSORLG00015014199	mrm3b	97	52.318	Oryzias_latipes_hsok
ENSIPUG00000016782	mrm3	98	53.125	ENSOMEG00000000985	mrm3b	89	54.167	Oryzias_melastigma
ENSIPUG00000016782	mrm3	97	50.776	ENSPMGG00000013075	mrm3b	97	50.776	Periophthalmus_magnuspinnatus
ENSIPUG00000016782	mrm3	99	51.316	ENSPFOG00000010323	mrm3b	98	51.316	Poecilia_formosa
ENSIPUG00000016782	mrm3	99	49.573	ENSPLAG00000019061	mrm3b	98	50.545	Poecilia_latipinna
ENSIPUG00000016782	mrm3	99	49.786	ENSPMEG00000000747	mrm3b	98	50.763	Poecilia_mexicana
ENSIPUG00000016782	mrm3	96	53.244	ENSPNYG00000016809	-	95	52.980	Pundamilia_nyererei
ENSIPUG00000016782	mrm3	98	53.097	ENSPNYG00000001035	-	98	53.097	Pundamilia_nyererei
ENSIPUG00000016782	mrm3	71	51.045	ENSPNAG00000003152	mrm3b	77	50.588	Pygocentrus_nattereri
ENSIPUG00000016782	mrm3	100	49.691	ENSSFOG00015004931	mrm3	91	51.910	Scleropages_formosus
ENSIPUG00000016782	mrm3	98	54.684	ENSSMAG00000007212	mrm3b	97	53.813	Scophthalmus_maximus
ENSIPUG00000016782	mrm3	99	53.348	ENSSLDG00000010991	-	98	53.132	Seriola_lalandi_dorsalis
ENSIPUG00000016782	mrm3	99	53.348	ENSSLDG00000011064	-	98	53.132	Seriola_lalandi_dorsalis
ENSIPUG00000016782	mrm3	100	50.625	ENSSPAG00000022282	mrm3b	99	53.004	Stegastes_partitus
ENSIPUG00000016782	mrm3	98	51.316	ENSXMAG00000019121	mrm3b	97	51.096	Xiphophorus_maculatus