EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSIPUG00000016851 (Gene tree)
Gene ID
108259999
Gene Symbol
srek1
Alias
zgc:100974
Full Name
splicing regulatory glutamic acid and lysine rich protein 1
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Plus strand
Length
14471 bases
Position
chr28:14149385-14163855
Accession
108259999
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000024903RRM_1PF00076.221.5e-2112
ENSIPUP00000024903RRM_1PF00076.221.5e-2122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000025937-2323XM_017459894ENSIPUP00000024903512 (aa)XP_017315383A0A2D0Q9L6
Gene Model
Click here to download ENSIPUG00000016851's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000016851's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000016851srek15480.287ENSG00000153914SREK18582.353Homo_sapiens
ENSIPUG00000016851srek15546.996ENSG00000116754SRSF116669.412Homo_sapiens
ENSIPUG00000016851srek15480.287ENSAMEG00000011327SREK19051.376Ailuropoda_melanoleuca
ENSIPUG00000016851srek18160.964ENSAOCG00000024379srek19557.656Amphiprion_ocellaris
ENSIPUG00000016851srek15444.404ENSAOCG00000010541-9036.468Amphiprion_ocellaris
ENSIPUG00000016851srek15444.404ENSAPEG00000003142SRSF118570.732Amphiprion_percula
ENSIPUG00000016851srek15444.404ENSATEG00000011691srsf117671.951Anabas_testudineus
ENSIPUG00000016851srek15444.604ENSATEG00000007534-9464.423Anabas_testudineus
ENSIPUG00000016851srek18161.557ENSATEG00000009450srek19557.416Anabas_testudineus
ENSIPUG00000016851srek15480.000ENSAPLG00000003948-9967.413Anas_platyrhynchos
ENSIPUG00000016851srek15547.350ENSACAG00000013654SRSF119039.839Anolis_carolinensis
ENSIPUG00000016851srek15546.996ENSANAG00000018690-8439.228Aotus_nancymaae
ENSIPUG00000016851srek15480.287ENSANAG00000031358SREK19178.652Aotus_nancymaae
ENSIPUG00000016851srek15583.099ENSACLG00000026754srek19683.099Astatotilapia_calliptera
ENSIPUG00000016851srek15444.043ENSAMXG00000008655-8437.917Astyanax_mexicanus
ENSIPUG00000016851srek110069.392ENSAMXG00000043877srek19972.885Astyanax_mexicanus
ENSIPUG00000016851srek15480.645ENSBTAG00000007321SREK18582.353Bos_taurus
ENSIPUG00000016851srek15546.643ENSBTAG00000015474SRSF118439.024Bos_taurus
ENSIPUG00000016851srek15546.643ENSCJAG00000017704SRSF118436.561Callithrix_jacchus
ENSIPUG00000016851srek15480.287ENSCJAG00000015950SREK19178.652Callithrix_jacchus
ENSIPUG00000016851srek15480.287ENSCAFG00000007560SREK18549.887Canis_familiaris
ENSIPUG00000016851srek15446.403ENSCHIG00000025295SRSF117567.045Capra_hircus
ENSIPUG00000016851srek15480.645ENSTSYG00000036957SREK19178.333Carlito_syrichta
ENSIPUG00000016851srek15543.509ENSTSYG00000033270-6566.304Carlito_syrichta
ENSIPUG00000016851srek15345.588ENSCPOG00000009554SRSF118438.115Cavia_porcellus
ENSIPUG00000016851srek15479.715ENSCPOG00000008925SREK19456.762Cavia_porcellus
ENSIPUG00000016851srek15546.996ENSCCAG00000036133-8738.812Cebus_capucinus
ENSIPUG00000016851srek15480.287ENSCCAG00000020591SREK18582.353Cebus_capucinus
ENSIPUG00000016851srek15480.287ENSCATG00000031482SREK19178.652Cercocebus_atys
ENSIPUG00000016851srek15546.996ENSCATG00000043613SRSF118439.228Cercocebus_atys
ENSIPUG00000016851srek15480.071ENSCLAG00000005024SREK16466.925Chinchilla_lanigera
ENSIPUG00000016851srek15546.996ENSCSAG00000001375SRSF118439.228Chlorocebus_sabaeus
ENSIPUG00000016851srek15677.966ENSCPBG00000026866SREK18381.362Chrysemys_picta_bellii
ENSIPUG00000016851srek15449.829ENSCING00000022892-9446.512Ciona_intestinalis
ENSIPUG00000016851srek15546.996ENSCANG00000039796SRSF118439.228Colobus_angolensis_palliatus
ENSIPUG00000016851srek15480.287ENSCANG00000030421SREK19178.652Colobus_angolensis_palliatus
ENSIPUG00000016851srek15478.472ENSCGRG00001015222-8456.395Cricetulus_griseus_chok1gshd
ENSIPUG00000016851srek15545.745ENSCGRG00001012043Srsf118238.966Cricetulus_griseus_chok1gshd
ENSIPUG00000016851srek15478.472ENSCGRG00000002130-8456.395Cricetulus_griseus_crigri
ENSIPUG00000016851srek15444.043ENSCSEG00000010721-8737.500Cynoglossus_semilaevis
ENSIPUG00000016851srek15442.599ENSCSEG00000008551srsf118635.516Cynoglossus_semilaevis
ENSIPUG00000016851srek15442.446ENSCVAG00000010634-9339.053Cyprinodon_variegatus
ENSIPUG00000016851srek15444.604ENSCVAG00000006934-8737.475Cyprinodon_variegatus
ENSIPUG00000016851srek19968.714ENSDARG00000009764srek19966.219Danio_rerio
ENSIPUG00000016851srek15480.287ENSDNOG00000010327SREK16166.753Dasypus_novemcinctus
ENSIPUG00000016851srek15546.643ENSDNOG00000008603SRSF118738.614Dasypus_novemcinctus
ENSIPUG00000016851srek15546.643ENSDORG00000000669Srsf118738.614Dipodomys_ordii
ENSIPUG00000016851srek15539.298FBgn0024285Srp545439.298Drosophila_melanogaster
ENSIPUG00000016851srek15467.025ENSETEG00000012977SREK17249.170Echinops_telfairi
ENSIPUG00000016851srek15446.403ENSEASG00005007847SRSF117767.045Equus_asinus_asinus
ENSIPUG00000016851srek15546.127ENSEEUG00000002456SRSF116540.199Erinaceus_europaeus
ENSIPUG00000016851srek15444.043ENSELUG00000021268-8437.552Esox_lucius
ENSIPUG00000016851srek19860.187ENSELUG00000008230srek19862.709Esox_lucius
ENSIPUG00000016851srek15444.203ENSELUG00000023887srsf118637.323Esox_lucius
ENSIPUG00000016851srek15479.715ENSFDAG00000017844SREK19451.884Fukomys_damarensis
ENSIPUG00000016851srek15443.165ENSFHEG00000003732SRSF118637.732Fundulus_heteroclitus
ENSIPUG00000016851srek17558.656ENSFHEG00000020971srek19758.182Fundulus_heteroclitus
ENSIPUG00000016851srek15444.245ENSFHEG00000013348-8738.289Fundulus_heteroclitus
ENSIPUG00000016851srek15543.463ENSGMOG00000002255-8539.958Gadus_morhua
ENSIPUG00000016851srek15546.290ENSGALG00000011305SRSF117738.370Gallus_gallus
ENSIPUG00000016851srek15542.403ENSGACG00000017855-8637.628Gasterosteus_aculeatus
ENSIPUG00000016851srek15442.806ENSGACG00000009346srsf119333.526Gasterosteus_aculeatus
ENSIPUG00000016851srek17365.473ENSGAGG00000006087SREK16584.706Gopherus_agassizii
ENSIPUG00000016851srek15480.287ENSGGOG00000004737SREK19178.652Gorilla_gorilla
ENSIPUG00000016851srek15546.996ENSGGOG00000005774SRSF118439.228Gorilla_gorilla
ENSIPUG00000016851srek15966.476ENSHGLG00000001181SREK19453.427Heterocephalus_glaber_female
ENSIPUG00000016851srek15546.643ENSHGLG00000008682SRSF118538.821Heterocephalus_glaber_female
ENSIPUG00000016851srek15479.715ENSHGLG00100003207SREK19453.229Heterocephalus_glaber_male
ENSIPUG00000016851srek15546.154ENSHGLG00100018382SRSF119239.165Heterocephalus_glaber_male
ENSIPUG00000016851srek15444.765ENSHCOG00000019035-8937.022Hippocampus_comes
ENSIPUG00000016851srek15546.643ENSSTOG00000008675SRSF118738.614Ictidomys_tridecemlineatus
ENSIPUG00000016851srek15479.715ENSSTOG00000008850SREK18582.353Ictidomys_tridecemlineatus
ENSIPUG00000016851srek15546.643ENSJJAG00000017238Srsf119038.416Jaculus_jaculus
ENSIPUG00000016851srek15441.007ENSKMAG00000009775srsf119536.634Kryptolebias_marmoratus
ENSIPUG00000016851srek15443.416ENSLBEG00000024167srsf118470.732Labrus_bergylta
ENSIPUG00000016851srek15545.936ENSLACG00000006575SRSF118739.479Latimeria_chalumnae
ENSIPUG00000016851srek15445.683ENSLOCG00000009617srsf118438.017Lepisosteus_oculatus
ENSIPUG00000016851srek15581.272ENSLOCG00000010547srek16069.146Lepisosteus_oculatus
ENSIPUG00000016851srek16766.857ENSLAFG00000013853SREK110050.115Loxodonta_africana
ENSIPUG00000016851srek15546.643ENSLAFG00000015882SRSF118640.166Loxodonta_africana
ENSIPUG00000016851srek15480.287ENSMFAG00000039823SREK19178.652Macaca_fascicularis
ENSIPUG00000016851srek15546.996ENSMFAG00000043405SRSF118439.228Macaca_fascicularis
ENSIPUG00000016851srek15480.287ENSMMUG00000014586SREK17982.558Macaca_mulatta
ENSIPUG00000016851srek15546.996ENSMMUG00000013852SRSF118539.228Macaca_mulatta
ENSIPUG00000016851srek15546.996ENSMNEG00000029428SRSF118439.228Macaca_nemestrina
ENSIPUG00000016851srek15480.287ENSMNEG00000030723SREK19178.652Macaca_nemestrina
ENSIPUG00000016851srek15546.996ENSMLEG00000041592SRSF118439.228Mandrillus_leucophaeus
ENSIPUG00000016851srek15480.287ENSMLEG00000039078SREK19178.652Mandrillus_leucophaeus
ENSIPUG00000016851srek15444.404ENSMAMG00000000369srsf118636.694Mastacembelus_armatus
ENSIPUG00000016851srek15444.404ENSMAMG00000015002-9464.423Mastacembelus_armatus
ENSIPUG00000016851srek15478.671ENSMAUG00000010066-8960.638Mesocricetus_auratus
ENSIPUG00000016851srek15545.745ENSMAUG00000008832Srsf118538.235Mesocricetus_auratus
ENSIPUG00000016851srek15480.287ENSMICG00000034959SREK19178.652Microcebus_murinus
ENSIPUG00000016851srek15446.403ENSMICG00000005537SRSF118336.952Microcebus_murinus
ENSIPUG00000016851srek15545.745ENSMOCG00000011388Srsf118238.966Microtus_ochrogaster
ENSIPUG00000016851srek15666.474ENSMOCG00000001536-8461.940Microtus_ochrogaster
ENSIPUG00000016851srek15443.116ENSMMOG00000016751-9361.607Mola_mola
ENSIPUG00000016851srek19650.256ENSMODG00000019665SREK19556.212Monodelphis_domestica
ENSIPUG00000016851srek19759.600ENSMALG00000017086srek19883.908Monopterus_albus
ENSIPUG00000016851srek15444.245ENSMALG00000020833-8737.195Monopterus_albus
ENSIPUG00000016851srek15545.745MGP_CAROLIEiJ_G0025767Srsf118569.412Mus_caroli
ENSIPUG00000016851srek15545.745ENSMUSG00000055436Srsf118469.412Mus_musculus
ENSIPUG00000016851srek15545.745MGP_PahariEiJ_G0027217Srsf118569.412Mus_pahari
ENSIPUG00000016851srek15545.745MGP_SPRETEiJ_G0026719Srsf118569.412Mus_spretus
ENSIPUG00000016851srek15546.643ENSMPUG00000000892SRSF118439.024Mustela_putorius_furo
ENSIPUG00000016851srek15480.287ENSMPUG00000014736SREK17155.992Mustela_putorius_furo
ENSIPUG00000016851srek15546.290ENSMLUG00000026338-8736.905Myotis_lucifugus
ENSIPUG00000016851srek15545.745ENSMLUG00000006203-8739.641Myotis_lucifugus
ENSIPUG00000016851srek15546.643ENSNGAG00000010637Srsf118238.614Nannospalax_galili
ENSIPUG00000016851srek15546.996ENSNLEG00000009400SRSF118439.228Nomascus_leucogenys
ENSIPUG00000016851srek15480.287ENSNLEG00000003827SREK18582.353Nomascus_leucogenys
ENSIPUG00000016851srek15545.390ENSMEUG00000000319SRSF118634.953Notamacropus_eugenii
ENSIPUG00000016851srek15481.004ENSOPRG00000012111SREK17067.792Ochotona_princeps
ENSIPUG00000016851srek15546.643ENSODEG00000006289SRSF118938.431Octodon_degus
ENSIPUG00000016851srek15485.305ENSONIG00000011080srek19966.406Oreochromis_niloticus
ENSIPUG00000016851srek15545.745ENSOANG00000015528SRSF119037.992Ornithorhynchus_anatinus
ENSIPUG00000016851srek15546.290ENSOCUG00000024114-7141.162Oryctolagus_cuniculus
ENSIPUG00000016851srek15546.316ENSOCUG00000002001-6642.569Oryctolagus_cuniculus
ENSIPUG00000016851srek15481.004ENSOCUG00000001319SREK17157.764Oryctolagus_cuniculus
ENSIPUG00000016851srek15546.479ENSOCUG00000025440-8040.185Oryctolagus_cuniculus
ENSIPUG00000016851srek15443.772ENSORLG00000007753srsf119035.453Oryzias_latipes
ENSIPUG00000016851srek15443.772ENSORLG00020016204srsf119035.645Oryzias_latipes_hni
ENSIPUG00000016851srek15443.885ENSORLG00020009393-9062.136Oryzias_latipes_hni
ENSIPUG00000016851srek15443.772ENSORLG00015011944srsf119035.192Oryzias_latipes_hsok
ENSIPUG00000016851srek15443.885ENSORLG00015009374-9062.136Oryzias_latipes_hsok
ENSIPUG00000016851srek15574.113ENSOMEG00000015817srek19855.644Oryzias_melastigma
ENSIPUG00000016851srek15444.128ENSOMEG00000022450srsf119134.990Oryzias_melastigma
ENSIPUG00000016851srek15443.165ENSOMEG00000006172-9439.147Oryzias_melastigma
ENSIPUG00000016851srek15546.479ENSOGAG00000003392SRSF118438.618Otolemur_garnettii
ENSIPUG00000016851srek15480.645ENSOARG00000006005SREK15869.106Ovis_aries
ENSIPUG00000016851srek15546.643ENSOARG00000011887SRSF118539.024Ovis_aries
ENSIPUG00000016851srek15546.996ENSPPAG00000036149SRSF118439.228Pan_paniscus
ENSIPUG00000016851srek16170.920ENSPPAG00000031605SREK19178.652Pan_paniscus
ENSIPUG00000016851srek15480.287ENSPPRG00000024617SREK18582.353Panthera_pardus
ENSIPUG00000016851srek15546.643ENSPPRG00000002720SRSF118738.614Panthera_pardus
ENSIPUG00000016851srek15480.287ENSPTIG00000006608SREK18582.353Panthera_tigris_altaica
ENSIPUG00000016851srek15480.287ENSPTRG00000016936SREK19178.652Pan_troglodytes
ENSIPUG00000016851srek15546.996ENSPTRG00000000852SRSF118439.228Pan_troglodytes
ENSIPUG00000016851srek15480.287ENSPANG00000008953SREK19178.652Papio_anubis
ENSIPUG00000016851srek15546.996ENSPANG00000018677SRSF118439.228Papio_anubis
ENSIPUG00000016851srek19865.583ENSPKIG00000025563srek19865.649Paramormyrops_kingsleyae
ENSIPUG00000016851srek15546.099ENSPSIG00000005152SRSF119038.552Pelodiscus_sinensis
ENSIPUG00000016851srek15478.472ENSPEMG00000024051-9160.563Peromyscus_maniculatus_bairdii
ENSIPUG00000016851srek15545.745ENSPEMG00000014288Srsf118538.235Peromyscus_maniculatus_bairdii
ENSIPUG00000016851srek15446.595ENSPMAG00000004397srsf118540.385Petromyzon_marinus
ENSIPUG00000016851srek15545.745ENSPCIG00000002083SRSF118637.721Phascolarctos_cinereus
ENSIPUG00000016851srek15442.446ENSPLAG00000015578srsf119138.160Poecilia_latipinna
ENSIPUG00000016851srek15442.806ENSPREG00000009065SRSF118736.992Poecilia_reticulata
ENSIPUG00000016851srek15442.806ENSPREG00000006016srsf117871.552Poecilia_reticulata
ENSIPUG00000016851srek15480.287ENSPPYG00000015515SREK15968.564Pongo_abelii
ENSIPUG00000016851srek15546.996ENSPPYG00000001245SRSF118439.228Pongo_abelii
ENSIPUG00000016851srek15546.643ENSPCAG00000012684SRSF118435.433Procavia_capensis
ENSIPUG00000016851srek15446.014ENSPCOG00000025365SRSF118337.398Propithecus_coquereli
ENSIPUG00000016851srek15480.287ENSPCOG00000026230SREK19178.652Propithecus_coquereli
ENSIPUG00000016851srek15480.287ENSPVAG00000009763SREK16168.571Pteropus_vampyrus
ENSIPUG00000016851srek16855.707ENSPNYG00000007160srek19854.318Pundamilia_nyererei
ENSIPUG00000016851srek110075.048ENSPNAG00000004328srek110075.573Pygocentrus_nattereri
ENSIPUG00000016851srek15545.745ENSRNOG00000029592Srsf118239.010Rattus_norvegicus
ENSIPUG00000016851srek15546.996ENSRBIG00000042971SRSF117463.542Rhinopithecus_bieti
ENSIPUG00000016851srek16169.940ENSRBIG00000033818SREK19176.923Rhinopithecus_bieti
ENSIPUG00000016851srek15546.996ENSRROG00000039667SRSF118439.228Rhinopithecus_roxellana
ENSIPUG00000016851srek15480.287ENSRROG00000017210SREK19178.652Rhinopithecus_roxellana
ENSIPUG00000016851srek15546.996ENSSBOG00000033461SRSF117463.542Saimiri_boliviensis_boliviensis
ENSIPUG00000016851srek15480.287ENSSBOG00000031230SREK19178.652Saimiri_boliviensis_boliviensis
ENSIPUG00000016851srek15545.745ENSSHAG00000012111SRSF119137.475Sarcophilus_harrisii
ENSIPUG00000016851srek15446.429ENSSFOG00015014887srsf118739.192Scleropages_formosus
ENSIPUG00000016851srek110064.098ENSSFOG00015004995srek19765.038Scleropages_formosus
ENSIPUG00000016851srek19762.897ENSSMAG00000011808srek19761.176Scophthalmus_maximus
ENSIPUG00000016851srek15442.806ENSSMAG00000019897-8736.640Scophthalmus_maximus
ENSIPUG00000016851srek15444.404ENSSDUG00000004582SRSF118636.694Seriola_dumerili
ENSIPUG00000016851srek15445.161ENSSLDG00000012105-9464.423Seriola_lalandi_dorsalis
ENSIPUG00000016851srek15579.859ENSSARG00000000795SREK15864.000Sorex_araneus
ENSIPUG00000016851srek15481.362ENSSPUG00000016553SREK18981.362Sphenodon_punctatus
ENSIPUG00000016851srek15546.996ENSSPUG00000016145SRSF119937.982Sphenodon_punctatus
ENSIPUG00000016851srek15444.404ENSSPAG00000005684srsf118734.866Stegastes_partitus
ENSIPUG00000016851srek15443.060ENSTRUG00000017369srsf118135.537Takifugu_rubripes
ENSIPUG00000016851srek15444.404ENSTNIG00000010494srsf118835.992Tetraodon_nigroviridis
ENSIPUG00000016851srek15483.154ENSTNIG00000013463srek16983.154Tetraodon_nigroviridis
ENSIPUG00000016851srek15446.403ENSTTRG00000015054SRSF118736.238Tursiops_truncatus
ENSIPUG00000016851srek15546.643ENSUMAG00000006618SRSF118938.182Ursus_maritimus
ENSIPUG00000016851srek15480.287ENSUMAG00000008191SREK15968.564Ursus_maritimus
ENSIPUG00000016851srek15546.479ENSXETG00000012371SRSF117541.860Xenopus_tropicalis
ENSIPUG00000016851srek15470.957ENSXETG00000021460srek19457.203Xenopus_tropicalis
ENSIPUG00000016851srek15442.446ENSXMAG00000005502srsf119137.573Xiphophorus_maculatus
ENSIPUG00000016851srek15442.806ENSXMAG00000019180SRSF117455.000Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us