EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000016878 (Gene tree)
Gene ID: 100304733
Gene Symbol: eif3c
Alias: eif3s8|fi37c04|wu:fb34a08|wu:fi37c04|zgc:66128
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 18440 bases
Position: chr13:25076775-25095214
Accession: 100304733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000024997	eIF-3c_N	PF05470.12	4.6e-252	1	1
ENSIPUP00000025060	eIF-3c_N	PF05470.12	2e-232	1	2
ENSIPUP00000025060	eIF-3c_N	PF05470.12	2e-232	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000026099	-	2595	-	ENSIPUP00000025060	864 (aa)	-	-
ENSIPUT00000026035	-	4647	XM_017482996	ENSIPUP00000024997	931 (aa)	XP_017338485	A0A2D0S8C9

Gene Model

Click here to download ENSIPUG00000016878's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000016878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000016878	eif3c	97	84.502	ENSG00000205609	EIF3CL	99	75.326	Homo_sapiens
ENSIPUG00000016878	eif3c	98	76.304	ENSG00000184110	EIF3C	100	83.544	Homo_sapiens
ENSIPUG00000016878	eif3c	99	86.845	ENSAPOG00000024092	eif3c	92	94.410	Acanthochromis_polyacanthus
ENSIPUG00000016878	eif3c	98	76.605	ENSAMEG00000015454	-	99	75.896	Ailuropoda_melanoleuca
ENSIPUG00000016878	eif3c	99	81.985	ENSACIG00000015082	eif3c	94	91.396	Amphilophus_citrinellus
ENSIPUG00000016878	eif3c	99	87.487	ENSAOCG00000021466	eif3c	94	92.033	Amphiprion_ocellaris
ENSIPUG00000016878	eif3c	99	87.487	ENSAPEG00000010521	eif3c	94	92.033	Amphiprion_percula
ENSIPUG00000016878	eif3c	99	86.845	ENSATEG00000019001	eif3c	99	86.417	Anabas_testudineus
ENSIPUG00000016878	eif3c	100	76.791	ENSACAG00000005937	-	100	76.282	Anolis_carolinensis
ENSIPUG00000016878	eif3c	98	76.304	ENSANAG00000020640	-	99	75.435	Aotus_nancymaae
ENSIPUG00000016878	eif3c	99	81.745	ENSACLG00000009347	eif3c	90	93.789	Astatotilapia_calliptera
ENSIPUG00000016878	eif3c	88	90.065	ENSACLG00000009322	eif3c	92	90.065	Astatotilapia_calliptera
ENSIPUG00000016878	eif3c	99	89.462	ENSAMXG00000020949	eif3c	99	88.077	Astyanax_mexicanus
ENSIPUG00000016878	eif3c	98	76.471	ENSBTAG00000006543	EIF3CL	99	75.978	Bos_taurus
ENSIPUG00000016878	eif3c	99	42.044	WBGene00001226	eif-3.C	68	46.519	Caenorhabditis_elegans
ENSIPUG00000016878	eif3c	98	76.413	ENSCJAG00000006341	-	100	77.717	Callithrix_jacchus
ENSIPUG00000016878	eif3c	98	76.605	ENSCAFG00000017143	-	99	75.570	Canis_familiaris
ENSIPUG00000016878	eif3c	98	76.605	ENSCAFG00020017587	-	99	75.787	Canis_lupus_dingo
ENSIPUG00000016878	eif3c	98	76.522	ENSCHIG00000024795	-	99	76.030	Capra_hircus
ENSIPUG00000016878	eif3c	98	76.170	ENSTSYG00000003486	-	99	75.353	Carlito_syrichta
ENSIPUG00000016878	eif3c	95	69.369	ENSCAPG00000015887	-	99	68.427	Cavia_aperea
ENSIPUG00000016878	eif3c	98	76.279	ENSCPOG00000007533	-	99	75.570	Cavia_porcellus
ENSIPUG00000016878	eif3c	98	76.035	ENSCCAG00000034928	-	86	84.390	Cebus_capucinus
ENSIPUG00000016878	eif3c	98	71.895	ENSCCAG00000027724	-	99	70.435	Cebus_capucinus
ENSIPUG00000016878	eif3c	97	65.601	ENSCCAG00000029099	-	67	73.710	Cebus_capucinus
ENSIPUG00000016878	eif3c	98	76.362	ENSCATG00000032673	-	99	75.490	Cercocebus_atys
ENSIPUG00000016878	eif3c	97	84.502	ENSCLAG00000011094	-	99	75.461	Chinchilla_lanigera
ENSIPUG00000016878	eif3c	98	76.362	ENSCSAG00000006297	-	99	75.490	Chlorocebus_sabaeus
ENSIPUG00000016878	eif3c	58	70.270	ENSCHOG00000003120	-	88	70.270	Choloepus_hoffmanni
ENSIPUG00000016878	eif3c	68	86.667	ENSCPBG00000012407	-	87	79.817	Chrysemys_picta_bellii
ENSIPUG00000016878	eif3c	91	49.491	ENSCSAVG00000006744	-	90	55.965	Ciona_savignyi
ENSIPUG00000016878	eif3c	98	76.362	ENSCANG00000033626	-	99	75.490	Colobus_angolensis_palliatus
ENSIPUG00000016878	eif3c	98	75.408	ENSCGRG00001015265	EIF3C	99	74.919	Cricetulus_griseus_chok1gshd
ENSIPUG00000016878	eif3c	99	84.722	ENSCSEG00000017770	eif3c	99	84.509	Cynoglossus_semilaevis
ENSIPUG00000016878	eif3c	99	85.561	ENSCVAG00000005402	eif3c	92	93.333	Cyprinodon_variegatus
ENSIPUG00000016878	eif3c	100	88.034	ENSDARG00000016443	eif3c	100	87.073	Danio_rerio
ENSIPUG00000016878	eif3c	98	76.496	ENSDNOG00000031497	-	99	75.679	Dasypus_novemcinctus
ENSIPUG00000016878	eif3c	98	75.952	ENSDORG00000016471	Eif3c	99	75.244	Dipodomys_ordii
ENSIPUG00000016878	eif3c	96	52.106	FBgn0034258	eIF3c	67	57.393	Drosophila_melanogaster
ENSIPUG00000016878	eif3c	90	85.253	ENSETEG00000013527	-	91	85.253	Echinops_telfairi
ENSIPUG00000016878	eif3c	97	64.039	ENSEBUG00000001629	eif3c	69	72.611	Eptatretus_burgeri
ENSIPUG00000016878	eif3c	98	76.387	ENSECAG00000008746	-	99	75.610	Equus_caballus
ENSIPUG00000016878	eif3c	66	56.119	ENSEEUG00000000726	-	64	55.877	Erinaceus_europaeus
ENSIPUG00000016878	eif3c	86	76.493	ENSEEUG00000006148	-	99	75.682	Erinaceus_europaeus
ENSIPUG00000016878	eif3c	100	85.790	ENSELUG00000022257	eif3c	93	93.212	Esox_lucius
ENSIPUG00000016878	eif3c	98	76.605	ENSFCAG00000015782	-	99	75.787	Felis_catus
ENSIPUG00000016878	eif3c	98	75.952	ENSFDAG00000003588	-	99	75.244	Fukomys_damarensis
ENSIPUG00000016878	eif3c	99	85.201	ENSFHEG00000014154	EIF3C	99	85.075	Fundulus_heteroclitus
ENSIPUG00000016878	eif3c	96	84.392	ENSGMOG00000016885	eif3c	100	84.727	Gadus_morhua
ENSIPUG00000016878	eif3c	95	86.456	ENSGACG00000007652	eif3c	99	84.194	Gasterosteus_aculeatus
ENSIPUG00000016878	eif3c	91	75.354	ENSGAGG00000006666	-	99	75.708	Gopherus_agassizii
ENSIPUG00000016878	eif3c	52	81.081	ENSGGOG00000022677	-	81	84.962	Gorilla_gorilla
ENSIPUG00000016878	eif3c	98	75.272	ENSGGOG00000026919	EIF3C	99	75.986	Gorilla_gorilla
ENSIPUG00000016878	eif3c	98	76.170	ENSHGLG00000011445	EIF3C	99	75.461	Heterocephalus_glaber_female
ENSIPUG00000016878	eif3c	98	76.170	ENSHGLG00100000217	EIF3C	99	75.461	Heterocephalus_glaber_male
ENSIPUG00000016878	eif3c	99	84.475	ENSHCOG00000019694	eif3c	99	84.047	Hippocampus_comes
ENSIPUG00000016878	eif3c	98	76.387	ENSSTOG00000021278	-	99	75.570	Ictidomys_tridecemlineatus
ENSIPUG00000016878	eif3c	98	75.027	ENSJJAG00000012722	Eif3c	85	82.764	Jaculus_jaculus
ENSIPUG00000016878	eif3c	98	86.105	ENSKMAG00000021662	eif3c	99	83.667	Kryptolebias_marmoratus
ENSIPUG00000016878	eif3c	100	84.936	ENSLBEG00000023370	eif3c	99	84.780	Labrus_bergylta
ENSIPUG00000016878	eif3c	97	80.979	ENSLACG00000000770	eif3c	100	79.055	Latimeria_chalumnae
ENSIPUG00000016878	eif3c	98	76.387	ENSLAFG00000027426	-	99	75.570	Loxodonta_africana
ENSIPUG00000016878	eif3c	98	76.362	ENSMFAG00000041930	-	99	75.490	Macaca_fascicularis
ENSIPUG00000016878	eif3c	98	76.362	ENSMMUG00000011798	-	99	75.490	Macaca_mulatta
ENSIPUG00000016878	eif3c	98	76.362	ENSMNEG00000023915	-	99	75.490	Macaca_nemestrina
ENSIPUG00000016878	eif3c	98	76.362	ENSMLEG00000027529	-	99	75.490	Mandrillus_leucophaeus
ENSIPUG00000016878	eif3c	99	87.366	ENSMAMG00000012512	eif3c	95	91.857	Mastacembelus_armatus
ENSIPUG00000016878	eif3c	99	82.460	ENSMZEG00005013699	eif3c	89	93.789	Maylandia_zebra
ENSIPUG00000016878	eif3c	88	90.065	ENSMZEG00005013685	eif3c	92	90.065	Maylandia_zebra
ENSIPUG00000016878	eif3c	98	75.408	ENSMAUG00000010621	Eif3c	99	74.810	Mesocricetus_auratus
ENSIPUG00000016878	eif3c	98	76.714	ENSMICG00000036748	-	99	75.787	Microcebus_murinus
ENSIPUG00000016878	eif3c	98	73.885	ENSMOCG00000004204	Eif3c	99	73.398	Microtus_ochrogaster
ENSIPUG00000016878	eif3c	99	80.161	ENSMMOG00000001572	eif3c	94	89.593	Mola_mola
ENSIPUG00000016878	eif3c	100	75.401	ENSMODG00000015579	-	100	74.545	Monodelphis_domestica
ENSIPUG00000016878	eif3c	99	81.159	ENSMALG00000008907	eif3c	93	93.210	Monopterus_albus
ENSIPUG00000016878	eif3c	98	75.490	MGP_CAROLIEiJ_G0030451	Eif3c	99	74.783	Mus_caroli
ENSIPUG00000016878	eif3c	98	75.599	ENSMUSG00000030738	Eif3c	99	74.891	Mus_musculus
ENSIPUG00000016878	eif3c	98	75.272	MGP_PahariEiJ_G0013661	Eif3c	99	74.457	Mus_pahari
ENSIPUG00000016878	eif3c	98	75.490	MGP_SPRETEiJ_G0031565	Eif3c	99	74.783	Mus_spretus
ENSIPUG00000016878	eif3c	95	77.088	ENSMPUG00000012732	-	99	76.351	Mustela_putorius_furo
ENSIPUG00000016878	eif3c	98	76.035	ENSMLUG00000015558	-	99	75.708	Myotis_lucifugus
ENSIPUG00000016878	eif3c	77	66.038	ENSNGAG00000010901	-	83	64.763	Nannospalax_galili
ENSIPUG00000016878	eif3c	98	76.004	ENSNGAG00000007177	-	99	75.298	Nannospalax_galili
ENSIPUG00000016878	eif3c	100	66.111	ENSNLEG00000001425	-	91	66.667	Nomascus_leucogenys
ENSIPUG00000016878	eif3c	99	63.597	ENSMEUG00000009939	-	100	62.730	Notamacropus_eugenii
ENSIPUG00000016878	eif3c	84	65.217	ENSMEUG00000005317	-	93	62.727	Notamacropus_eugenii
ENSIPUG00000016878	eif3c	98	75.843	ENSOPRG00000000931	-	99	75.027	Ochotona_princeps
ENSIPUG00000016878	eif3c	98	75.926	ENSODEG00000013508	-	99	75.599	Octodon_degus
ENSIPUG00000016878	eif3c	70	69.357	ENSONIG00000011434	eif3c	99	69.357	Oreochromis_niloticus
ENSIPUG00000016878	eif3c	100	72.708	ENSOANG00000011410	-	100	72.046	Ornithorhynchus_anatinus
ENSIPUG00000016878	eif3c	98	76.496	ENSOCUG00000022489	-	99	75.787	Oryctolagus_cuniculus
ENSIPUG00000016878	eif3c	97	85.903	ENSORLG00000006318	eif3c	99	81.508	Oryzias_latipes
ENSIPUG00000016878	eif3c	97	85.903	ENSORLG00020015713	eif3c	94	91.694	Oryzias_latipes_hni
ENSIPUG00000016878	eif3c	97	85.683	ENSORLG00015013772	eif3c	99	83.439	Oryzias_latipes_hsok
ENSIPUG00000016878	eif3c	99	85.944	ENSOMEG00000020450	eif3c	99	85.193	Oryzias_melastigma
ENSIPUG00000016878	eif3c	98	76.413	ENSOGAG00000012737	-	99	75.597	Otolemur_garnettii
ENSIPUG00000016878	eif3c	98	76.522	ENSOARG00000002892	-	99	76.030	Ovis_aries
ENSIPUG00000016878	eif3c	98	76.605	ENSPPRG00000012336	-	99	75.787	Panthera_pardus
ENSIPUG00000016878	eif3c	98	76.605	ENSPTIG00000011712	-	99	75.787	Panthera_tigris_altaica
ENSIPUG00000016878	eif3c	98	76.362	ENSPANG00000021151	-	99	75.490	Papio_anubis
ENSIPUG00000016878	eif3c	100	85.714	ENSPKIG00000002049	eif3c	100	85.577	Paramormyrops_kingsleyae
ENSIPUG00000016878	eif3c	89	92.974	ENSPMGG00000005409	eif3c	94	92.974	Periophthalmus_magnuspinnatus
ENSIPUG00000016878	eif3c	98	75.245	ENSPEMG00000010899	Eif3c	86	83.577	Peromyscus_maniculatus_bairdii
ENSIPUG00000016878	eif3c	100	75.401	ENSPCIG00000025206	-	100	74.652	Phascolarctos_cinereus
ENSIPUG00000016878	eif3c	99	86.218	ENSPFOG00000004476	eif3c	99	85.043	Poecilia_formosa
ENSIPUG00000016878	eif3c	88	95.604	ENSPLAG00000017480	eif3c	99	84.296	Poecilia_latipinna
ENSIPUG00000016878	eif3c	99	86.096	ENSPMEG00000019512	eif3c	99	85.348	Poecilia_mexicana
ENSIPUG00000016878	eif3c	99	82.200	ENSPREG00000023139	eif3c	70	93.322	Poecilia_reticulata
ENSIPUG00000016878	eif3c	98	73.913	ENSPPYG00000007227	-	99	73.261	Pongo_abelii
ENSIPUG00000016878	eif3c	70	84.080	ENSPCAG00000012710	-	100	84.080	Procavia_capensis
ENSIPUG00000016878	eif3c	98	76.605	ENSPCOG00000019289	-	93	84.804	Propithecus_coquereli
ENSIPUG00000016878	eif3c	98	76.496	ENSPVAG00000005804	-	99	75.679	Pteropus_vampyrus
ENSIPUG00000016878	eif3c	66	76.433	ENSPNYG00000016530	eif3c	82	91.018	Pundamilia_nyererei
ENSIPUG00000016878	eif3c	100	88.853	ENSPNAG00000024040	eif3c	100	88.424	Pygocentrus_nattereri
ENSIPUG00000016878	eif3c	98	75.817	ENSRNOG00000018761	Eif3c	99	75.000	Rattus_norvegicus
ENSIPUG00000016878	eif3c	95	76.768	ENSRBIG00000044009	-	98	73.951	Rhinopithecus_bieti
ENSIPUG00000016878	eif3c	98	76.362	ENSRROG00000043626	-	99	75.490	Rhinopithecus_roxellana
ENSIPUG00000016878	eif3c	72	31.900	YMR309C	-	81	31.900	Saccharomyces_cerevisiae
ENSIPUG00000016878	eif3c	98	76.304	ENSSBOG00000032155	-	99	75.435	Saimiri_boliviensis_boliviensis
ENSIPUG00000016878	eif3c	96	75.885	ENSSHAG00000011808	-	100	75.111	Sarcophilus_harrisii
ENSIPUG00000016878	eif3c	99	85.515	ENSSFOG00015021823	eif3c	99	83.638	Scleropages_formosus
ENSIPUG00000016878	eif3c	99	85.065	ENSSMAG00000016638	eif3c	97	85.635	Scophthalmus_maximus
ENSIPUG00000016878	eif3c	99	87.152	ENSSDUG00000023117	eif3c	95	93.789	Seriola_dumerili
ENSIPUG00000016878	eif3c	99	87.152	ENSSLDG00000009706	eif3c	93	93.789	Seriola_lalandi_dorsalis
ENSIPUG00000016878	eif3c	100	75.936	ENSSPUG00000016470	-	100	74.732	Sphenodon_punctatus
ENSIPUG00000016878	eif3c	99	86.203	ENSSPAG00000000426	eif3c	99	85.775	Stegastes_partitus
ENSIPUG00000016878	eif3c	98	76.061	ENSSSCG00000034927	-	99	75.353	Sus_scrofa
ENSIPUG00000016878	eif3c	97	90.080	ENSTRUG00000008951	eif3c	99	84.115	Takifugu_rubripes
ENSIPUG00000016878	eif3c	99	82.762	ENSTNIG00000015210	eif3c	99	82.976	Tetraodon_nigroviridis
ENSIPUG00000016878	eif3c	98	76.496	ENSTTRG00000005880	-	99	75.570	Tursiops_truncatus
ENSIPUG00000016878	eif3c	71	84.666	ENSUAMG00000001127	-	91	92.357	Ursus_americanus
ENSIPUG00000016878	eif3c	98	76.605	ENSUMAG00000010927	-	99	75.896	Ursus_maritimus
ENSIPUG00000016878	eif3c	97	82.871	ENSVVUG00000025970	-	99	74.619	Vulpes_vulpes
ENSIPUG00000016878	eif3c	100	76.635	ENSXETG00000002941	eif3c	100	76.527	Xenopus_tropicalis
ENSIPUG00000016878	eif3c	99	85.638	ENSXMAG00000013796	eif3c	99	84.345	Xiphophorus_maculatus