EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSIPUG00000016896 (Gene tree)
Gene ID
108272935
Gene Symbol
rbfox2
Alias
rbm9|zgc:85694
Full Name
RNA binding protein fox-1 homolog 2-like
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Minus strand
Length
70154 bases
Position
chr12:6488963-6559116
Accession
108272935
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000025032Fox-1_CPF12414.85.9e-3811
ENSIPUP00000024998Fox-1_CPF12414.86.7e-3811
ENSIPUP00000024980Fox-1_CPF12414.89e-3811
ENSIPUP00000024974Fox-1_CPF12414.81.1e-2411
ENSIPUP00000024974RRM_1PF00076.221.4e-1811
ENSIPUP00000025032RRM_1PF00076.221.8e-1811
ENSIPUP00000024998RRM_1PF00076.221.9e-1811
ENSIPUP00000024980RRM_1PF00076.222.6e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000026010-4699XM_017481810ENSIPUP00000024974305 (aa)XP_017337299-
ENSIPUT00000026034-1185XM_017481811ENSIPUP00000024998394 (aa)XP_017337300-
ENSIPUT00000026070-1113XM_017481812ENSIPUP00000025032370 (aa)XP_017337301-
ENSIPUT00000026016-1392XM_017481804ENSIPUP00000024980463 (aa)XP_017337293-
Gene Model
Click here to download ENSIPUG00000016896's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000016896's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSIPUG00000016896rbfox28954.579ENSIPUG00000021966rbfox3b8754.688
ENSIPUG00000016896rbfox27160.150ENSIPUG00000000065rbfox1l7059.489
ENSIPUG00000016896rbfox29557.426ENSIPUG00000015215rbfox19654.054
ENSIPUG00000016896rbfox28658.175ENSIPUG00000012010rbfox3a8655.627
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000016896rbfox28959.409ENSG00000100320RBFOX29962.800Homo_sapiens
ENSIPUG00000016896rbfox210077.027ENSAPOG00000004877rbfox210072.766Acanthochromis_polyacanthus
ENSIPUG00000016896rbfox29476.866ENSAPOG00000021561-10067.641Acanthochromis_polyacanthus
ENSIPUG00000016896rbfox27863.889ENSAMEG00000007228RBFOX29962.346Ailuropoda_melanoleuca
ENSIPUG00000016896rbfox25588.623ENSACIG00000022922-7988.623Amphilophus_citrinellus
ENSIPUG00000016896rbfox26273.913ENSACIG00000001690rbfox28072.124Amphilophus_citrinellus
ENSIPUG00000016896rbfox29380.755ENSAOCG00000015358-10069.538Amphiprion_ocellaris
ENSIPUG00000016896rbfox29385.441ENSAOCG00000013752rbfox210074.200Amphiprion_ocellaris
ENSIPUG00000016896rbfox29382.061ENSAPEG00000022359rbfox210072.553Amphiprion_percula
ENSIPUG00000016896rbfox29380.755ENSAPEG00000013905-10069.538Amphiprion_percula
ENSIPUG00000016896rbfox29479.401ENSATEG00000009959-10069.937Anabas_testudineus
ENSIPUG00000016896rbfox29380.153ENSATEG00000021951rbfox210071.064Anabas_testudineus
ENSIPUG00000016896rbfox28958.630ENSAPLG00000007609RBFOX29158.082Anas_platyrhynchos
ENSIPUG00000016896rbfox28958.630ENSACAG00000016535RBFOX29653.305Anolis_carolinensis
ENSIPUG00000016896rbfox27864.375ENSANAG00000015245RBFOX29762.813Aotus_nancymaae
ENSIPUG00000016896rbfox29382.443ENSACLG00000009744rbfox210072.128Astatotilapia_calliptera
ENSIPUG00000016896rbfox210069.231ENSACLG00000017380-10067.223Astatotilapia_calliptera
ENSIPUG00000016896rbfox210092.992ENSAMXG00000011451rbfox210092.992Astyanax_mexicanus
ENSIPUG00000016896rbfox28959.574ENSBTAG00000020125RBFOX29357.600Bos_taurus
ENSIPUG00000016896rbfox28958.602ENSCJAG00000038886-8857.258Callithrix_jacchus
ENSIPUG00000016896rbfox28959.043ENSCJAG00000019456-9653.277Callithrix_jacchus
ENSIPUG00000016896rbfox28958.871ENSCAFG00000001701RBFOX29157.527Canis_familiaris
ENSIPUG00000016896rbfox28953.825ENSCAFG00020004541RBFOX29648.922Canis_lupus_dingo
ENSIPUG00000016896rbfox28959.409ENSCHIG00000014027RBFOX29655.635Capra_hircus
ENSIPUG00000016896rbfox29856.824ENSTSYG00000014123RBFOX210055.107Carlito_syrichta
ENSIPUG00000016896rbfox27963.366ENSCAPG00000014308RBFOX27163.475Cavia_aperea
ENSIPUG00000016896rbfox28264.072ENSCPOG00000022180RBFOX28262.575Cavia_porcellus
ENSIPUG00000016896rbfox28959.043ENSCCAG00000036584RBFOX29653.277Cebus_capucinus
ENSIPUG00000016896rbfox28959.946ENSCATG00000038655RBFOX29756.115Cercocebus_atys
ENSIPUG00000016896rbfox28958.760ENSCLAG00000017106RBFOX29258.221Chinchilla_lanigera
ENSIPUG00000016896rbfox28658.170ENSCSAG00000008110RBFOX28752.312Chlorocebus_sabaeus
ENSIPUG00000016896rbfox28557.807ENSCHOG00000002887RBFOX29656.811Choloepus_hoffmanni
ENSIPUG00000016896rbfox28958.871ENSCPBG00000023144RBFOX29658.333Chrysemys_picta_bellii
ENSIPUG00000016896rbfox28959.409ENSCANG00000035832RBFOX210055.344Colobus_angolensis_palliatus
ENSIPUG00000016896rbfox29757.426ENSCGRG00001017727Rbfox29158.333Cricetulus_griseus_chok1gshd
ENSIPUG00000016896rbfox28959.677ENSCGRG00000014237Rbfox29158.333Cricetulus_griseus_crigri
ENSIPUG00000016896rbfox210068.008ENSCSEG00000007748rbfox210068.209Cynoglossus_semilaevis
ENSIPUG00000016896rbfox29473.379ENSCSEG00000007360-10065.992Cynoglossus_semilaevis
ENSIPUG00000016896rbfox26179.204ENSCVAG00000004491rbfox29479.904Cyprinodon_variegatus
ENSIPUG00000016896rbfox29858.621ENSCVAG00000016503-9960.471Cyprinodon_variegatus
ENSIPUG00000016896rbfox26482.231ENSDARG00000052182rbfox210083.884Danio_rerio
ENSIPUG00000016896rbfox28958.602ENSDNOG00000004372RBFOX28757.796Dasypus_novemcinctus
ENSIPUG00000016896rbfox28957.258ENSDORG00000015003Rbfox29656.720Dipodomys_ordii
ENSIPUG00000016896rbfox28952.342ENSETEG00000005638RBFOX210049.755Echinops_telfairi
ENSIPUG00000016896rbfox28959.677ENSEASG00005018920RBFOX29654.158Equus_asinus_asinus
ENSIPUG00000016896rbfox28959.677ENSECAG00000018923RBFOX29654.158Equus_caballus
ENSIPUG00000016896rbfox28652.210ENSEEUG00000004549RBFOX29649.231Erinaceus_europaeus
ENSIPUG00000016896rbfox27272.273ENSELUG00000000102rbfox210070.417Esox_lucius
ENSIPUG00000016896rbfox29673.559ENSELUG00000009404-10064.694Esox_lucius
ENSIPUG00000016896rbfox28959.517ENSFCAG00000010061RBFOX29652.966Felis_catus
ENSIPUG00000016896rbfox28958.630ENSFALG00000013111RBFOX29058.082Ficedula_albicollis
ENSIPUG00000016896rbfox29346.769ENSFDAG00000006204RBFOX29245.245Fukomys_damarensis
ENSIPUG00000016896rbfox25085.621ENSFHEG00000006384-9585.621Fundulus_heteroclitus
ENSIPUG00000016896rbfox29480.224ENSFHEG00000010546rbfox210071.125Fundulus_heteroclitus
ENSIPUG00000016896rbfox210063.198ENSGMOG00000005278rbfox210064.213Gadus_morhua
ENSIPUG00000016896rbfox28554.608ENSGALG00000012540RBFOX27554.795Gallus_gallus
ENSIPUG00000016896rbfox25058.974ENSGAFG00000017428-9555.823Gambusia_affinis
ENSIPUG00000016896rbfox26180.000ENSGAFG00000008448rbfox29480.769Gambusia_affinis
ENSIPUG00000016896rbfox29856.456ENSGACG00000007174-10057.722Gasterosteus_aculeatus
ENSIPUG00000016896rbfox210065.099ENSGACG00000015968rbfox210064.604Gasterosteus_aculeatus
ENSIPUG00000016896rbfox28764.364ENSGAGG00000025884RBFOX29158.871Gopherus_agassizii
ENSIPUG00000016896rbfox28959.043ENSGGOG00000037332RBFOX29653.277Gorilla_gorilla
ENSIPUG00000016896rbfox210067.442ENSHBUG00000000856-10069.247Haplochromis_burtoni
ENSIPUG00000016896rbfox29382.443ENSHBUG00000004356rbfox210072.128Haplochromis_burtoni
ENSIPUG00000016896rbfox28959.409ENSHGLG00000012907RBFOX29955.156Heterocephalus_glaber_female
ENSIPUG00000016896rbfox28958.491ENSHGLG00100009986RBFOX29157.951Heterocephalus_glaber_male
ENSIPUG00000016896rbfox210065.690ENSHCOG00000005662-10067.155Hippocampus_comes
ENSIPUG00000016896rbfox29381.679ENSHCOG00000016102rbfox210070.576Hippocampus_comes
ENSIPUG00000016896rbfox28959.946ENSSTOG00000014841RBFOX29158.602Ictidomys_tridecemlineatus
ENSIPUG00000016896rbfox28959.677ENSJJAG00000014885Rbfox29158.602Jaculus_jaculus
ENSIPUG00000016896rbfox29476.119ENSKMAG00000013354-8287.117Kryptolebias_marmoratus
ENSIPUG00000016896rbfox29980.277ENSKMAG00000021880-10071.949Kryptolebias_marmoratus
ENSIPUG00000016896rbfox25474.257ENSLBEG00000026187rbfox28574.257Labrus_bergylta
ENSIPUG00000016896rbfox25849.351ENSLBEG00000028310-6949.351Labrus_bergylta
ENSIPUG00000016896rbfox28952.910ENSLACG00000003339RBFOX29153.175Latimeria_chalumnae
ENSIPUG00000016896rbfox28957.713ENSLAFG00000027140RBFOX29356.383Loxodonta_africana
ENSIPUG00000016896rbfox28959.946ENSMFAG00000031994RBFOX29655.635Macaca_fascicularis
ENSIPUG00000016896rbfox28959.409ENSMMUG00000014010RBFOX29658.065Macaca_mulatta
ENSIPUG00000016896rbfox28959.574ENSMNEG00000034388RBFOX29755.819Macaca_nemestrina
ENSIPUG00000016896rbfox28959.043ENSMLEG00000005854RBFOX210055.344Mandrillus_leucophaeus
ENSIPUG00000016896rbfox29371.528ENSMAMG00000008980-10063.941Mastacembelus_armatus
ENSIPUG00000016896rbfox29385.878ENSMAMG00000004293rbfox210072.979Mastacembelus_armatus
ENSIPUG00000016896rbfox29385.441ENSMZEG00005023838rbfox210076.944Maylandia_zebra
ENSIPUG00000016896rbfox210069.231ENSMZEG00005004959-10069.102Maylandia_zebra
ENSIPUG00000016896rbfox25070.968ENSMGAG00000012724RBFOX210069.355Meleagris_gallopavo
ENSIPUG00000016896rbfox29857.568ENSMAUG00000018816Rbfox29158.333Mesocricetus_auratus
ENSIPUG00000016896rbfox28347.440ENSMICG00000046341-7344.816Microcebus_murinus
ENSIPUG00000016896rbfox28959.043ENSMICG00000035417RBFOX29653.277Microcebus_murinus
ENSIPUG00000016896rbfox28959.946ENSMOCG00000009327Rbfox29158.602Microtus_ochrogaster
ENSIPUG00000016896rbfox25588.690ENSMMOG00000007925-8589.286Mola_mola
ENSIPUG00000016896rbfox29055.614ENSMMOG00000008287rbfox210068.067Mola_mola
ENSIPUG00000016896rbfox28956.510ENSMODG00000001122RBFOX29355.990Monodelphis_domestica
ENSIPUG00000016896rbfox26480.417ENSMALG00000000623rbfox210080.000Monopterus_albus
ENSIPUG00000016896rbfox25584.431ENSMALG00000002264-7483.832Monopterus_albus
ENSIPUG00000016896rbfox28959.946MGP_CAROLIEiJ_G0019957Rbfox29953.138Mus_caroli
ENSIPUG00000016896rbfox28959.946ENSMUSG00000033565Rbfox29952.905Mus_musculus
ENSIPUG00000016896rbfox28959.946MGP_PahariEiJ_G0019967Rbfox29953.138Mus_pahari
ENSIPUG00000016896rbfox28959.946MGP_SPRETEiJ_G0020860Rbfox29953.138Mus_spretus
ENSIPUG00000016896rbfox28959.043ENSMPUG00000012555RBFOX29755.344Mustela_putorius_furo
ENSIPUG00000016896rbfox28958.047ENSMLUG00000002676RBFOX29854.717Myotis_lucifugus
ENSIPUG00000016896rbfox28958.760ENSNGAG00000020528Rbfox29158.177Nannospalax_galili
ENSIPUG00000016896rbfox29382.443ENSNBRG00000018155rbfox210072.128Neolamprologus_brichardi
ENSIPUG00000016896rbfox29872.607ENSNBRG00000001568-8868.895Neolamprologus_brichardi
ENSIPUG00000016896rbfox28959.043ENSNLEG00000034979RBFOX210054.875Nomascus_leucogenys
ENSIPUG00000016896rbfox28954.787ENSMEUG00000001547RBFOX210052.019Notamacropus_eugenii
ENSIPUG00000016896rbfox28168.478ENSOPRG00000014878RBFOX28466.304Ochotona_princeps
ENSIPUG00000016896rbfox28958.491ENSODEG00000009937RBFOX29653.419Octodon_degus
ENSIPUG00000016896rbfox29865.261ENSONIG00000017998rbfox29765.757Oreochromis_niloticus
ENSIPUG00000016896rbfox29759.194ENSONIG00000008341-9761.425Oreochromis_niloticus
ENSIPUG00000016896rbfox28558.219ENSOANG00000007489RBFOX28958.219Ornithorhynchus_anatinus
ENSIPUG00000016896rbfox28950.532ENSOCUG00000001349RBFOX29747.743Oryctolagus_cuniculus
ENSIPUG00000016896rbfox210077.966ENSORLG00000028082rbfox210071.338Oryzias_latipes
ENSIPUG00000016896rbfox29672.355ENSORLG00000014948-10067.715Oryzias_latipes
ENSIPUG00000016896rbfox210076.610ENSORLG00020008976rbfox210071.550Oryzias_latipes_hni
ENSIPUG00000016896rbfox29672.014ENSORLG00020005676-10069.182Oryzias_latipes_hni
ENSIPUG00000016896rbfox210076.610ENSORLG00015007027rbfox210071.550Oryzias_latipes_hsok
ENSIPUG00000016896rbfox29672.014ENSORLG00015000797-10069.182Oryzias_latipes_hsok
ENSIPUG00000016896rbfox29382.443ENSOMEG00000015966rbfox210070.825Oryzias_melastigma
ENSIPUG00000016896rbfox29672.542ENSOMEG00000007909-10067.782Oryzias_melastigma
ENSIPUG00000016896rbfox28958.511ENSOGAG00000033250RBFOX29257.181Otolemur_garnettii
ENSIPUG00000016896rbfox28956.533ENSOARG00000018669RBFOX29155.200Ovis_aries
ENSIPUG00000016896rbfox28959.043ENSPPAG00000035653RBFOX29955.116Pan_paniscus
ENSIPUG00000016896rbfox28958.981ENSPPRG00000015635RBFOX29657.682Panthera_pardus
ENSIPUG00000016896rbfox28958.621ENSPTIG00000019147RBFOX29257.333Panthera_tigris_altaica
ENSIPUG00000016896rbfox28959.043ENSPTRG00000014305RBFOX29653.277Pan_troglodytes
ENSIPUG00000016896rbfox28959.151ENSPANG00000007030RBFOX29755.476Papio_anubis
ENSIPUG00000016896rbfox29473.519ENSPKIG00000006854-10061.638Paramormyrops_kingsleyae
ENSIPUG00000016896rbfox29859.536ENSPKIG00000010816-9959.115Paramormyrops_kingsleyae
ENSIPUG00000016896rbfox28957.951ENSPSIG00000017828RBFOX29158.333Pelodiscus_sinensis
ENSIPUG00000016896rbfox29669.625ENSPMGG00000016969-8969.625Periophthalmus_magnuspinnatus
ENSIPUG00000016896rbfox26479.832ENSPMGG00000007138rbfox210079.832Periophthalmus_magnuspinnatus
ENSIPUG00000016896rbfox28959.946ENSPEMG00000012542Rbfox29158.602Peromyscus_maniculatus_bairdii
ENSIPUG00000016896rbfox28958.981ENSPCIG00000021550RBFOX29657.641Phascolarctos_cinereus
ENSIPUG00000016896rbfox29382.824ENSPFOG00000014209rbfox210071.915Poecilia_formosa
ENSIPUG00000016896rbfox28074.494ENSPFOG00000001869-10069.817Poecilia_formosa
ENSIPUG00000016896rbfox25488.485ENSPLAG00000002710-10077.642Poecilia_latipinna
ENSIPUG00000016896rbfox26480.417ENSPLAG00000017308rbfox210080.000Poecilia_latipinna
ENSIPUG00000016896rbfox25060.000ENSPMEG00000018399-7560.645Poecilia_mexicana
ENSIPUG00000016896rbfox26480.833ENSPMEG00000007320rbfox210080.417Poecilia_mexicana
ENSIPUG00000016896rbfox25488.554ENSPMEG00000013663-10080.162Poecilia_mexicana
ENSIPUG00000016896rbfox26479.498ENSPREG00000012955rbfox210079.079Poecilia_reticulata
ENSIPUG00000016896rbfox25588.690ENSPREG00000016105-6289.286Poecilia_reticulata
ENSIPUG00000016896rbfox28959.043ENSPPYG00000011766RBFOX29653.277Pongo_abelii
ENSIPUG00000016896rbfox28955.376ENSPCOG00000016273RBFOX29253.495Propithecus_coquereli
ENSIPUG00000016896rbfox26463.704ENSPVAG00000015844RBFOX26662.593Pteropus_vampyrus
ENSIPUG00000016896rbfox29382.443ENSPNYG00000016161rbfox210072.340Pundamilia_nyererei
ENSIPUG00000016896rbfox29473.540ENSPNYG00000020595-10067.992Pundamilia_nyererei
ENSIPUG00000016896rbfox29662.327ENSPNAG00000014196-10056.221Pygocentrus_nattereri
ENSIPUG00000016896rbfox29979.784ENSPNAG00000000168rbfox210078.065Pygocentrus_nattereri
ENSIPUG00000016896rbfox28959.946ENSRNOG00000004688Rbfox29755.875Rattus_norvegicus
ENSIPUG00000016896rbfox28959.946ENSRBIG00000033696RBFOX29158.602Rhinopithecus_bieti
ENSIPUG00000016896rbfox28959.574ENSRROG00000035715RBFOX29658.245Rhinopithecus_roxellana
ENSIPUG00000016896rbfox28959.409ENSSBOG00000028291RBFOX29955.024Saimiri_boliviensis_boliviensis
ENSIPUG00000016896rbfox28958.177ENSSHAG00000006835RBFOX29755.263Sarcophilus_harrisii
ENSIPUG00000016896rbfox28072.840ENSSFOG00015013291-7772.803Scleropages_formosus
ENSIPUG00000016896rbfox210074.074ENSSFOG00015010482-10075.926Scleropages_formosus
ENSIPUG00000016896rbfox29478.909ENSSMAG00000004317-10067.360Scophthalmus_maximus
ENSIPUG00000016896rbfox29385.441ENSSMAG00000013662rbfox210072.921Scophthalmus_maximus
ENSIPUG00000016896rbfox29382.443ENSSDUG00000004292rbfox210072.340Seriola_dumerili
ENSIPUG00000016896rbfox29479.478ENSSDUG00000009511-10069.665Seriola_dumerili
ENSIPUG00000016896rbfox29476.119ENSSLDG00000018052-10068.410Seriola_lalandi_dorsalis
ENSIPUG00000016896rbfox29774.916ENSSLDG00000023983rbfox28172.165Seriola_lalandi_dorsalis
ENSIPUG00000016896rbfox28056.842ENSSPUG00000011797RBFOX27655.172Sphenodon_punctatus
ENSIPUG00000016896rbfox29385.441ENSSPAG00000013681rbfox210073.987Stegastes_partitus
ENSIPUG00000016896rbfox29476.493ENSSPAG00000016272-10068.410Stegastes_partitus
ENSIPUG00000016896rbfox28959.409ENSSSCG00000000152RBFOX29655.635Sus_scrofa
ENSIPUG00000016896rbfox28958.630ENSTGUG00000010808RBFOX29358.082Taeniopygia_guttata
ENSIPUG00000016896rbfox29856.072ENSTRUG00000007739-9755.814Takifugu_rubripes
ENSIPUG00000016896rbfox25074.286ENSTRUG00000002748rbfox210074.286Takifugu_rubripes
ENSIPUG00000016896rbfox27178.049ENSTBEG00000003297-6375.610Tupaia_belangeri
ENSIPUG00000016896rbfox28959.309ENSTTRG00000006922RBFOX210055.582Tursiops_truncatus
ENSIPUG00000016896rbfox28757.843ENSUAMG00000010612RBFOX28357.101Ursus_americanus
ENSIPUG00000016896rbfox28558.863ENSUMAG00000016785RBFOX27457.860Ursus_maritimus
ENSIPUG00000016896rbfox28558.416ENSVPAG00000002824RBFOX210051.306Vicugna_pacos
ENSIPUG00000016896rbfox28958.871ENSVVUG00000023561RBFOX29954.312Vulpes_vulpes
ENSIPUG00000016896rbfox28957.825ENSXETG00000000231rbfox29257.560Xenopus_tropicalis
ENSIPUG00000016896rbfox27475.556ENSXCOG00000015905-9856.164Xiphophorus_couchianus
ENSIPUG00000016896rbfox26077.477ENSXCOG00000013643rbfox210077.027Xiphophorus_couchianus
ENSIPUG00000016896rbfox29477.407ENSXMAG00000026769-10068.421Xiphophorus_maculatus
ENSIPUG00000016896rbfox210069.383ENSXMAG00000029498rbfox210069.136Xiphophorus_maculatus

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