EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000017053 (Gene tree)
Gene ID: 108255448
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR domain zinc finger protein 12-like
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 3167 bases
Position: chr22:11608512-11611678
Accession: 108255448
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000025238	zf-C2H2	PF00096.26	1.4e-09	1	2
ENSIPUP00000025238	zf-C2H2	PF00096.26	1.4e-09	2	2
ENSIPUP00000025238	zf-met	PF12874.7	7.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000026283	-	1107	XM_017451390	ENSIPUP00000025238	368 (aa)	XP_017306879	A0A2D0PLK6

Gene Model

Click here to download ENSIPUG00000017053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000017053's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000017053	prdm12b	100	80.163	ENSIPUG00000019544	PRDM12	100	80.163
ENSIPUG00000017053	prdm12b	71	42.105	ENSIPUG00000001248	prdm5	97	40.000
ENSIPUG00000017053	prdm12b	70	45.000	ENSIPUG00000023513	-	69	40.449
ENSIPUG00000017053	prdm12b	70	42.667	ENSIPUG00000017575	-	84	44.000
ENSIPUG00000017053	prdm12b	68	44.737	ENSIPUG00000003011	-	65	42.683

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000017053	prdm12b	90	87.651	ENSG00000130711	PRDM12	99	80.585	Homo_sapiens
ENSIPUG00000017053	prdm12b	100	83.594	ENSAPOG00000016051	prdm12b	100	83.854	Acanthochromis_polyacanthus
ENSIPUG00000017053	prdm12b	100	68.617	ENSAPOG00000018234	-	100	68.351	Acanthochromis_polyacanthus
ENSIPUG00000017053	prdm12b	89	85.106	ENSAMEG00000016234	PRDM12	99	84.802	Ailuropoda_melanoleuca
ENSIPUG00000017053	prdm12b	100	82.850	ENSACIG00000019578	prdm12b	100	83.113	Amphilophus_citrinellus
ENSIPUG00000017053	prdm12b	100	79.688	ENSACIG00000005193	-	100	78.571	Amphilophus_citrinellus
ENSIPUG00000017053	prdm12b	100	83.947	ENSAOCG00000015040	prdm12b	100	84.211	Amphiprion_ocellaris
ENSIPUG00000017053	prdm12b	100	75.258	ENSAPEG00000022849	-	99	77.062	Amphiprion_percula
ENSIPUG00000017053	prdm12b	100	84.881	ENSAPEG00000015092	prdm12b	100	85.561	Amphiprion_percula
ENSIPUG00000017053	prdm12b	100	81.299	ENSATEG00000014595	-	100	81.299	Anabas_testudineus
ENSIPUG00000017053	prdm12b	94	85.303	ENSANAG00000020616	PRDM12	96	87.126	Aotus_nancymaae
ENSIPUG00000017053	prdm12b	100	78.934	ENSACLG00000007631	-	100	79.949	Astatotilapia_calliptera
ENSIPUG00000017053	prdm12b	100	82.703	ENSACLG00000011876	prdm12b	100	82.703	Astatotilapia_calliptera
ENSIPUG00000017053	prdm12b	100	82.880	ENSAMXG00000008540	PRDM12	100	82.880	Astyanax_mexicanus
ENSIPUG00000017053	prdm12b	100	92.432	ENSAMXG00000033665	prdm12b	100	92.973	Astyanax_mexicanus
ENSIPUG00000017053	prdm12b	91	87.425	ENSBTAG00000023797	PRDM12	99	82.703	Bos_taurus
ENSIPUG00000017053	prdm12b	91	87.126	ENSCJAG00000020540	PRDM12	99	82.385	Callithrix_jacchus
ENSIPUG00000017053	prdm12b	79	88.316	ENSCAFG00000023076	PRDM12	99	82.121	Canis_familiaris
ENSIPUG00000017053	prdm12b	91	87.425	ENSCAFG00020024046	PRDM12	99	82.038	Canis_lupus_dingo
ENSIPUG00000017053	prdm12b	91	87.425	ENSCHIG00000025005	PRDM12	99	82.480	Capra_hircus
ENSIPUG00000017053	prdm12b	91	83.284	ENSCPOG00000005901	PRDM12	99	83.036	Cavia_porcellus
ENSIPUG00000017053	prdm12b	91	87.126	ENSCCAG00000037485	PRDM12	99	81.720	Cebus_capucinus
ENSIPUG00000017053	prdm12b	91	87.126	ENSCATG00000020327	PRDM12	99	81.720	Cercocebus_atys
ENSIPUG00000017053	prdm12b	91	87.126	ENSCLAG00000005499	PRDM12	90	87.126	Chinchilla_lanigera
ENSIPUG00000017053	prdm12b	91	87.126	ENSCSAG00000014756	PRDM12	99	81.501	Chlorocebus_sabaeus
ENSIPUG00000017053	prdm12b	100	84.511	ENSCPBG00000022628	PRDM12	99	84.239	Chrysemys_picta_bellii
ENSIPUG00000017053	prdm12b	91	87.126	ENSCGRG00001015005	Prdm12	99	81.671	Cricetulus_griseus_chok1gshd
ENSIPUG00000017053	prdm12b	100	78.974	ENSCVAG00000000944	-	100	80.000	Cyprinodon_variegatus
ENSIPUG00000017053	prdm12b	100	83.871	ENSCVAG00000017166	prdm12b	100	84.409	Cyprinodon_variegatus
ENSIPUG00000017053	prdm12b	100	90.489	ENSDARG00000007430	prdm12b	100	89.946	Danio_rerio
ENSIPUG00000017053	prdm12b	90	86.866	ENSDNOG00000042302	PRDM12	99	81.843	Dasypus_novemcinctus
ENSIPUG00000017053	prdm12b	88	66.377	ENSEBUG00000016780	prdm12b	82	64.151	Eptatretus_burgeri
ENSIPUG00000017053	prdm12b	94	85.591	ENSEASG00005008472	PRDM12	99	82.480	Equus_asinus_asinus
ENSIPUG00000017053	prdm12b	94	85.591	ENSECAG00000005933	PRDM12	99	82.480	Equus_caballus
ENSIPUG00000017053	prdm12b	100	79.620	ENSELUG00000013674	PRDM12	100	80.159	Esox_lucius
ENSIPUG00000017053	prdm12b	100	87.601	ENSELUG00000009905	prdm12b	100	87.601	Esox_lucius
ENSIPUG00000017053	prdm12b	91	87.425	ENSFCAG00000043086	PRDM12	99	81.793	Felis_catus
ENSIPUG00000017053	prdm12b	100	85.326	ENSFALG00000001445	PRDM12	89	84.783	Ficedula_albicollis
ENSIPUG00000017053	prdm12b	100	78.734	ENSFHEG00000007746	-	100	79.082	Fundulus_heteroclitus
ENSIPUG00000017053	prdm12b	100	83.467	ENSFHEG00000003944	prdm12b	100	84.267	Fundulus_heteroclitus
ENSIPUG00000017053	prdm12b	100	81.769	ENSGMOG00000011797	prdm12b	100	80.429	Gadus_morhua
ENSIPUG00000017053	prdm12b	100	85.326	ENSGALG00000003895	PRDM12	99	84.783	Gallus_gallus
ENSIPUG00000017053	prdm12b	100	82.759	ENSGAFG00000010827	prdm12b	99	82.353	Gambusia_affinis
ENSIPUG00000017053	prdm12b	100	83.378	ENSGACG00000016713	prdm12b	99	83.378	Gasterosteus_aculeatus
ENSIPUG00000017053	prdm12b	100	84.783	ENSGAGG00000014083	PRDM12	99	84.511	Gopherus_agassizii
ENSIPUG00000017053	prdm12b	90	87.349	ENSGGOG00000010568	PRDM12	99	81.132	Gorilla_gorilla
ENSIPUG00000017053	prdm12b	100	78.934	ENSHBUG00000022537	-	93	79.949	Haplochromis_burtoni
ENSIPUG00000017053	prdm12b	100	83.554	ENSHBUG00000022878	prdm12b	100	83.554	Haplochromis_burtoni
ENSIPUG00000017053	prdm12b	91	86.826	ENSHGLG00000013939	PRDM12	99	81.081	Heterocephalus_glaber_female
ENSIPUG00000017053	prdm12b	90	84.211	ENSHCOG00000003663	prdm12b	100	77.551	Hippocampus_comes
ENSIPUG00000017053	prdm12b	100	74.005	ENSHCOG00000021167	-	100	72.414	Hippocampus_comes
ENSIPUG00000017053	prdm12b	94	85.303	ENSSTOG00000005986	PRDM12	86	87.126	Ictidomys_tridecemlineatus
ENSIPUG00000017053	prdm12b	91	87.126	ENSJJAG00000005424	Prdm12	99	87.126	Jaculus_jaculus
ENSIPUG00000017053	prdm12b	100	78.218	ENSKMAG00000016921	prdm12b	100	77.970	Kryptolebias_marmoratus
ENSIPUG00000017053	prdm12b	99	79.515	ENSKMAG00000021205	-	99	79.245	Kryptolebias_marmoratus
ENSIPUG00000017053	prdm12b	100	83.333	ENSLBEG00000017769	prdm12b	100	83.333	Labrus_bergylta
ENSIPUG00000017053	prdm12b	100	80.000	ENSLBEG00000007776	-	100	80.789	Labrus_bergylta
ENSIPUG00000017053	prdm12b	100	85.598	ENSLACG00000017560	PRDM12	99	85.326	Latimeria_chalumnae
ENSIPUG00000017053	prdm12b	100	87.500	ENSLOCG00000005429	prdm12b	99	89.130	Lepisosteus_oculatus
ENSIPUG00000017053	prdm12b	91	85.882	ENSLAFG00000006979	PRDM12	90	85.841	Loxodonta_africana
ENSIPUG00000017053	prdm12b	91	86.826	ENSMFAG00000040322	PRDM12	99	80.851	Macaca_fascicularis
ENSIPUG00000017053	prdm12b	91	87.126	ENSMNEG00000037234	PRDM12	99	81.720	Macaca_nemestrina
ENSIPUG00000017053	prdm12b	100	84.267	ENSMAMG00000013212	prdm12b	100	84.267	Mastacembelus_armatus
ENSIPUG00000017053	prdm12b	100	76.396	ENSMAMG00000018988	-	100	78.426	Mastacembelus_armatus
ENSIPUG00000017053	prdm12b	100	78.535	ENSMZEG00005000415	PRDM12	100	79.545	Maylandia_zebra
ENSIPUG00000017053	prdm12b	98	85.083	ENSMGAG00000005438	PRDM12	98	84.530	Meleagris_gallopavo
ENSIPUG00000017053	prdm12b	100	80.475	ENSMAUG00000013040	Prdm12	99	81.283	Mesocricetus_auratus
ENSIPUG00000017053	prdm12b	95	85.100	ENSMICG00000015480	PRDM12	99	81.793	Microcebus_murinus
ENSIPUG00000017053	prdm12b	97	83.380	ENSMOCG00000021026	Prdm12	90	87.425	Microtus_ochrogaster
ENSIPUG00000017053	prdm12b	100	84.553	ENSMODG00000012108	PRDM12	99	84.282	Monodelphis_domestica
ENSIPUG00000017053	prdm12b	86	80.374	ENSMALG00000021901	prdm12b	99	71.850	Monopterus_albus
ENSIPUG00000017053	prdm12b	90	87.651	MGP_CAROLIEiJ_G0023414	Prdm12	99	81.551	Mus_caroli
ENSIPUG00000017053	prdm12b	90	87.651	ENSMUSG00000079466	Prdm12	99	81.551	Mus_musculus
ENSIPUG00000017053	prdm12b	90	87.651	MGP_PahariEiJ_G0024871	Prdm12	99	81.551	Mus_pahari
ENSIPUG00000017053	prdm12b	90	87.651	MGP_SPRETEiJ_G0024331	Prdm12	99	81.551	Mus_spretus
ENSIPUG00000017053	prdm12b	90	87.349	ENSNGAG00000018480	Prdm12	99	81.250	Nannospalax_galili
ENSIPUG00000017053	prdm12b	100	82.632	ENSNBRG00000006727	prdm12b	100	82.895	Neolamprologus_brichardi
ENSIPUG00000017053	prdm12b	100	74.339	ENSNBRG00000024312	-	100	74.868	Neolamprologus_brichardi
ENSIPUG00000017053	prdm12b	100	75.881	ENSMEUG00000003828	PRDM12	99	75.610	Notamacropus_eugenii
ENSIPUG00000017053	prdm12b	91	86.527	ENSOPRG00000008680	PRDM12	99	86.527	Ochotona_princeps
ENSIPUG00000017053	prdm12b	94	85.014	ENSODEG00000016282	PRDM12	62	86.826	Octodon_degus
ENSIPUG00000017053	prdm12b	63	83.190	ENSOANG00000001043	PRDM12	100	82.328	Ornithorhynchus_anatinus
ENSIPUG00000017053	prdm12b	84	85.484	ENSOCUG00000008241	PRDM12	97	85.484	Oryctolagus_cuniculus
ENSIPUG00000017053	prdm12b	100	79.231	ENSORLG00000017558	-	100	80.256	Oryzias_latipes
ENSIPUG00000017053	prdm12b	100	82.058	ENSORLG00000007114	prdm12b	99	82.322	Oryzias_latipes
ENSIPUG00000017053	prdm12b	100	79.284	ENSORLG00020013167	-	100	80.051	Oryzias_latipes_hni
ENSIPUG00000017053	prdm12b	100	82.368	ENSORLG00020019565	prdm12b	99	82.632	Oryzias_latipes_hni
ENSIPUG00000017053	prdm12b	100	82.058	ENSORLG00015007621	prdm12b	99	82.322	Oryzias_latipes_hsok
ENSIPUG00000017053	prdm12b	100	79.231	ENSORLG00015003435	-	100	80.256	Oryzias_latipes_hsok
ENSIPUG00000017053	prdm12b	100	79.481	ENSOMEG00000007762	-	100	79.481	Oryzias_melastigma
ENSIPUG00000017053	prdm12b	100	81.414	ENSOMEG00000004134	prdm12b	99	81.675	Oryzias_melastigma
ENSIPUG00000017053	prdm12b	91	87.425	ENSOGAG00000007557	PRDM12	98	87.425	Otolemur_garnettii
ENSIPUG00000017053	prdm12b	79	85.616	ENSPPAG00000031506	-	99	84.228	Pan_paniscus
ENSIPUG00000017053	prdm12b	100	75.335	ENSPPRG00000023024	PRDM12	92	75.067	Panthera_pardus
ENSIPUG00000017053	prdm12b	90	87.651	ENSPTRG00000043324	-	99	81.402	Pan_troglodytes
ENSIPUG00000017053	prdm12b	90	87.651	ENSPTRG00000021475	PRDM12	99	81.402	Pan_troglodytes
ENSIPUG00000017053	prdm12b	91	87.126	ENSPANG00000025967	PRDM12	99	81.720	Papio_anubis
ENSIPUG00000017053	prdm12b	100	89.008	ENSPKIG00000007228	prdm12b	100	88.740	Paramormyrops_kingsleyae
ENSIPUG00000017053	prdm12b	94	79.772	ENSPKIG00000004305	PRDM12	94	82.727	Paramormyrops_kingsleyae
ENSIPUG00000017053	prdm12b	100	83.967	ENSPSIG00000006739	PRDM12	99	83.696	Pelodiscus_sinensis
ENSIPUG00000017053	prdm12b	100	83.288	ENSPMGG00000008867	prdm12b	99	83.558	Periophthalmus_magnuspinnatus
ENSIPUG00000017053	prdm12b	100	77.378	ENSPMGG00000002356	-	100	77.635	Periophthalmus_magnuspinnatus
ENSIPUG00000017053	prdm12b	91	87.126	ENSPEMG00000009969	Prdm12	90	87.126	Peromyscus_maniculatus_bairdii
ENSIPUG00000017053	prdm12b	100	84.553	ENSPCIG00000024119	PRDM12	99	84.282	Phascolarctos_cinereus
ENSIPUG00000017053	prdm12b	100	83.200	ENSPFOG00000019841	prdm12b	100	82.888	Poecilia_formosa
ENSIPUG00000017053	prdm12b	100	81.842	ENSPLAG00000016626	prdm12b	99	82.493	Poecilia_latipinna
ENSIPUG00000017053	prdm12b	96	81.967	ENSPMEG00000016698	prdm12b	99	82.645	Poecilia_mexicana
ENSIPUG00000017053	prdm12b	95	75.556	ENSPREG00000003211	-	94	75.556	Poecilia_reticulata
ENSIPUG00000017053	prdm12b	100	81.890	ENSPREG00000015073	prdm12b	99	82.368	Poecilia_reticulata
ENSIPUG00000017053	prdm12b	93	85.217	ENSPPYG00000019694	PRDM12	93	87.387	Pongo_abelii
ENSIPUG00000017053	prdm12b	91	87.425	ENSPCOG00000022255	PRDM12	99	82.210	Propithecus_coquereli
ENSIPUG00000017053	prdm12b	91	87.126	ENSPVAG00000001511	PRDM12	99	81.671	Pteropus_vampyrus
ENSIPUG00000017053	prdm12b	100	82.850	ENSPNYG00000009607	prdm12b	100	82.850	Pundamilia_nyererei
ENSIPUG00000017053	prdm12b	100	78.535	ENSPNYG00000013589	-	100	79.545	Pundamilia_nyererei
ENSIPUG00000017053	prdm12b	100	77.454	ENSPNAG00000013396	PRDM12	100	77.632	Pygocentrus_nattereri
ENSIPUG00000017053	prdm12b	100	94.837	ENSPNAG00000024532	prdm12b	100	94.837	Pygocentrus_nattereri
ENSIPUG00000017053	prdm12b	90	87.651	ENSRNOG00000009218	Prdm12	99	81.551	Rattus_norvegicus
ENSIPUG00000017053	prdm12b	88	87.267	ENSRBIG00000042712	PRDM12	88	86.503	Rhinopithecus_bieti
ENSIPUG00000017053	prdm12b	89	87.423	ENSRROG00000043554	PRDM12	99	87.423	Rhinopithecus_roxellana
ENSIPUG00000017053	prdm12b	100	84.054	ENSSHAG00000015972	PRDM12	99	83.784	Sarcophilus_harrisii
ENSIPUG00000017053	prdm12b	100	78.920	ENSSMAG00000003754	prdm12b	100	80.051	Scophthalmus_maximus
ENSIPUG00000017053	prdm12b	100	82.902	ENSSDUG00000023498	prdm12b	100	82.902	Seriola_dumerili
ENSIPUG00000017053	prdm12b	100	81.723	ENSSDUG00000019071	-	100	81.771	Seriola_dumerili
ENSIPUG00000017053	prdm12b	100	80.759	ENSSLDG00000013562	-	100	81.030	Seriola_lalandi_dorsalis
ENSIPUG00000017053	prdm12b	100	83.812	ENSSLDG00000009557	prdm12b	100	83.812	Seriola_lalandi_dorsalis
ENSIPUG00000017053	prdm12b	100	85.326	ENSSPUG00000013424	PRDM12	99	84.783	Sphenodon_punctatus
ENSIPUG00000017053	prdm12b	100	72.351	ENSSPAG00000022420	-	100	73.902	Stegastes_partitus
ENSIPUG00000017053	prdm12b	100	83.465	ENSSPAG00000018824	prdm12b	100	83.727	Stegastes_partitus
ENSIPUG00000017053	prdm12b	91	87.425	ENSSSCG00000005703	PRDM12	99	82.038	Sus_scrofa
ENSIPUG00000017053	prdm12b	100	83.378	ENSTRUG00000018659	prdm12b	100	83.200	Takifugu_rubripes
ENSIPUG00000017053	prdm12b	100	80.323	ENSTRUG00000013239	-	100	80.323	Takifugu_rubripes
ENSIPUG00000017053	prdm12b	100	83.378	ENSTNIG00000009020	prdm12b	99	83.646	Tetraodon_nigroviridis
ENSIPUG00000017053	prdm12b	100	76.944	ENSTNIG00000005859	-	99	76.139	Tetraodon_nigroviridis
ENSIPUG00000017053	prdm12b	91	87.425	ENSUAMG00000009653	PRDM12	91	87.425	Ursus_americanus
ENSIPUG00000017053	prdm12b	91	87.425	ENSVVUG00000027662	PRDM12	78	87.425	Vulpes_vulpes
ENSIPUG00000017053	prdm12b	100	83.733	ENSXCOG00000002836	prdm12b	99	83.422	Xiphophorus_couchianus
ENSIPUG00000017053	prdm12b	100	84.000	ENSXMAG00000005537	prdm12b	100	84.000	Xiphophorus_maculatus
ENSIPUG00000017053	prdm12b	100	77.121	ENSXMAG00000028012	-	100	78.149	Xiphophorus_maculatus