EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000017079 (Gene tree)
Gene ID: 108269967
Gene Symbol: gnl2
Alias: wu:fc15c12|zgc:65800|zgc:77319
Full Name: G protein nucleolar 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 26538 bases
Position: chr1:21700918-21727455
Accession: 108269967
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000025277	MMR_HSR1	PF01926.23	5.8e-16	1	1
ENSIPUP00000025301	MMR_HSR1	PF01926.23	6.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000026323	-	4249	XM_017476159	ENSIPUP00000025277	731 (aa)	XP_017331648	A0A2D0RMA5
ENSIPUT00000026349	-	2133	-	ENSIPUP00000025301	710 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000017079's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000017079's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000017079	gnl2	99	67.116	ENSG00000134697	GNL2	99	80.000	Homo_sapiens
ENSIPUG00000017079	gnl2	99	75.782	ENSAPOG00000024507	gnl2	99	75.984	Acanthochromis_polyacanthus
ENSIPUG00000017079	gnl2	98	68.176	ENSAMEG00000001032	GNL2	96	67.270	Ailuropoda_melanoleuca
ENSIPUG00000017079	gnl2	100	71.429	ENSACIG00000018346	gnl2	99	71.566	Amphilophus_citrinellus
ENSIPUG00000017079	gnl2	99	76.327	ENSAOCG00000014396	gnl2	99	76.463	Amphiprion_ocellaris
ENSIPUG00000017079	gnl2	99	76.327	ENSAPEG00000005375	gnl2	99	76.463	Amphiprion_percula
ENSIPUG00000017079	gnl2	99	76.124	ENSATEG00000009311	gnl2	99	75.664	Anabas_testudineus
ENSIPUG00000017079	gnl2	97	67.549	ENSAPLG00000006508	GNL2	96	67.507	Anas_platyrhynchos
ENSIPUG00000017079	gnl2	97	64.802	ENSACAG00000017224	GNL2	96	64.490	Anolis_carolinensis
ENSIPUG00000017079	gnl2	99	66.846	ENSANAG00000023449	GNL2	96	67.545	Aotus_nancymaae
ENSIPUG00000017079	gnl2	92	87.365	ENSAMXG00000020288	gnl2	100	77.716	Astyanax_mexicanus
ENSIPUG00000017079	gnl2	99	67.483	ENSBTAG00000003849	GNL2	96	67.639	Bos_taurus
ENSIPUG00000017079	gnl2	65	56.616	WBGene00003596	ngp-1	73	57.175	Caenorhabditis_elegans
ENSIPUG00000017079	gnl2	99	67.248	ENSCJAG00000001980	GNL2	96	67.822	Callithrix_jacchus
ENSIPUG00000017079	gnl2	98	67.125	ENSCAFG00000003289	GNL2	96	67.549	Canis_familiaris
ENSIPUG00000017079	gnl2	98	67.400	ENSCAFG00020008050	GNL2	96	67.827	Canis_lupus_dingo
ENSIPUG00000017079	gnl2	99	67.611	ENSCHIG00000015731	GNL2	96	68.194	Capra_hircus
ENSIPUG00000017079	gnl2	99	67.246	ENSTSYG00000004537	GNL2	96	67.541	Carlito_syrichta
ENSIPUG00000017079	gnl2	97	58.941	ENSCAPG00000017481	GNL2	95	59.820	Cavia_aperea
ENSIPUG00000017079	gnl2	97	67.361	ENSCPOG00000026804	GNL2	96	68.058	Cavia_porcellus
ENSIPUG00000017079	gnl2	99	66.980	ENSCCAG00000034952	GNL2	96	67.684	Cebus_capucinus
ENSIPUG00000017079	gnl2	99	66.712	ENSCATG00000026503	GNL2	99	65.633	Cercocebus_atys
ENSIPUG00000017079	gnl2	99	66.577	ENSCLAG00000012504	GNL2	96	67.358	Chinchilla_lanigera
ENSIPUG00000017079	gnl2	99	66.981	ENSCSAG00000001110	GNL2	99	65.903	Chlorocebus_sabaeus
ENSIPUG00000017079	gnl2	72	69.388	ENSCHOG00000009509	GNL2	69	69.388	Choloepus_hoffmanni
ENSIPUG00000017079	gnl2	97	67.545	ENSCPBG00000018483	GNL2	99	65.276	Chrysemys_picta_bellii
ENSIPUG00000017079	gnl2	75	56.957	ENSCING00000010696	-	95	57.224	Ciona_intestinalis
ENSIPUG00000017079	gnl2	97	44.475	ENSCSAVG00000001583	-	95	43.687	Ciona_savignyi
ENSIPUG00000017079	gnl2	99	63.477	ENSCANG00000036748	GNL2	99	62.668	Colobus_angolensis_palliatus
ENSIPUG00000017079	gnl2	99	65.814	ENSCGRG00001016733	Gnl2	96	66.203	Cricetulus_griseus_chok1gshd
ENSIPUG00000017079	gnl2	99	65.814	ENSCGRG00000017418	Gnl2	96	66.203	Cricetulus_griseus_crigri
ENSIPUG00000017079	gnl2	99	74.355	ENSCSEG00000020296	gnl2	99	74.049	Cynoglossus_semilaevis
ENSIPUG00000017079	gnl2	85	71.178	ENSCVAG00000017712	gnl2	99	69.891	Cyprinodon_variegatus
ENSIPUG00000017079	gnl2	100	77.657	ENSDARG00000098080	gnl2	100	94.737	Danio_rerio
ENSIPUG00000017079	gnl2	98	67.490	ENSDNOG00000016466	-	96	67.733	Dasypus_novemcinctus
ENSIPUG00000017079	gnl2	98	67.215	ENSDNOG00000033314	-	96	67.177	Dasypus_novemcinctus
ENSIPUG00000017079	gnl2	99	61.898	ENSDORG00000014429	Gnl2	96	61.878	Dipodomys_ordii
ENSIPUG00000017079	gnl2	98	47.368	FBgn0034243	Ns2	74	54.894	Drosophila_melanogaster
ENSIPUG00000017079	gnl2	89	66.407	ENSETEG00000016674	GNL2	100	65.170	Echinops_telfairi
ENSIPUG00000017079	gnl2	98	58.060	ENSEBUG00000005300	gnl2	96	60.031	Eptatretus_burgeri
ENSIPUG00000017079	gnl2	98	66.895	ENSEASG00005012227	GNL2	96	67.406	Equus_asinus_asinus
ENSIPUG00000017079	gnl2	98	67.168	ENSECAG00000008068	GNL2	96	67.545	Equus_caballus
ENSIPUG00000017079	gnl2	99	61.465	ENSEEUG00000011345	GNL2	99	60.598	Erinaceus_europaeus
ENSIPUG00000017079	gnl2	100	71.542	ENSELUG00000000675	gnl2	100	71.184	Esox_lucius
ENSIPUG00000017079	gnl2	98	67.808	ENSFCAG00000008760	GNL2	96	67.083	Felis_catus
ENSIPUG00000017079	gnl2	97	66.759	ENSFALG00000000909	GNL2	96	66.853	Ficedula_albicollis
ENSIPUG00000017079	gnl2	99	66.890	ENSFDAG00000013274	GNL2	96	67.917	Fukomys_damarensis
ENSIPUG00000017079	gnl2	70	71.372	ENSFHEG00000022857	gnl2	96	70.858	Fundulus_heteroclitus
ENSIPUG00000017079	gnl2	100	70.112	ENSGMOG00000004427	gnl2	100	69.391	Gadus_morhua
ENSIPUG00000017079	gnl2	97	68.156	ENSGALG00000001973	GNL2	88	67.782	Gallus_gallus
ENSIPUG00000017079	gnl2	100	74.390	ENSGAFG00000008794	gnl2	99	74.526	Gambusia_affinis
ENSIPUG00000017079	gnl2	99	71.467	ENSGACG00000013692	gnl2	99	71.739	Gasterosteus_aculeatus
ENSIPUG00000017079	gnl2	83	65.484	ENSGAGG00000003905	GNL2	99	62.441	Gopherus_agassizii
ENSIPUG00000017079	gnl2	99	66.846	ENSGGOG00000007704	GNL2	96	67.131	Gorilla_gorilla
ENSIPUG00000017079	gnl2	97	58.790	ENSHGLG00000007433	-	96	58.850	Heterocephalus_glaber_female
ENSIPUG00000017079	gnl2	99	68.059	ENSHGLG00000013728	GNL2	99	66.712	Heterocephalus_glaber_female
ENSIPUG00000017079	gnl2	99	68.059	ENSHGLG00100002593	GNL2	99	66.712	Heterocephalus_glaber_male
ENSIPUG00000017079	gnl2	85	71.498	ENSHGLG00100016036	-	91	71.498	Heterocephalus_glaber_male
ENSIPUG00000017079	gnl2	97	58.790	ENSHGLG00100001365	-	96	58.850	Heterocephalus_glaber_male
ENSIPUG00000017079	gnl2	100	65.642	ENSHCOG00000012109	gnl2	100	65.282	Hippocampus_comes
ENSIPUG00000017079	gnl2	99	66.040	ENSSTOG00000005217	GNL2	96	66.667	Ictidomys_tridecemlineatus
ENSIPUG00000017079	gnl2	99	67.341	ENSJJAG00000010798	Gnl2	96	66.898	Jaculus_jaculus
ENSIPUG00000017079	gnl2	99	73.442	ENSKMAG00000018855	gnl2	99	73.541	Kryptolebias_marmoratus
ENSIPUG00000017079	gnl2	99	72.999	ENSLBEG00000008518	gnl2	99	73.684	Labrus_bergylta
ENSIPUG00000017079	gnl2	97	68.524	ENSLACG00000016998	GNL2	96	68.768	Latimeria_chalumnae
ENSIPUG00000017079	gnl2	99	66.444	ENSLAFG00000018723	GNL2	96	66.989	Loxodonta_africana
ENSIPUG00000017079	gnl2	99	67.470	ENSMFAG00000039033	GNL2	99	66.399	Macaca_fascicularis
ENSIPUG00000017079	gnl2	99	66.981	ENSMMUG00000008419	GNL2	99	65.903	Macaca_mulatta
ENSIPUG00000017079	gnl2	99	67.114	ENSMNEG00000043438	GNL2	99	66.040	Macaca_nemestrina
ENSIPUG00000017079	gnl2	99	64.603	ENSMLEG00000044421	GNL2	99	63.661	Mandrillus_leucophaeus
ENSIPUG00000017079	gnl2	100	75.034	ENSMAMG00000007823	gnl2	100	75.815	Mastacembelus_armatus
ENSIPUG00000017079	gnl2	99	73.343	ENSMZEG00005007393	gnl2	99	74.184	Maylandia_zebra
ENSIPUG00000017079	gnl2	78	79.211	ENSMZEG00005008412	GNL2	80	80.072	Maylandia_zebra
ENSIPUG00000017079	gnl2	97	63.231	ENSMGAG00000003267	GNL2	96	62.275	Meleagris_gallopavo
ENSIPUG00000017079	gnl2	99	64.721	ENSMAUG00000018529	Gnl2	96	66.435	Mesocricetus_auratus
ENSIPUG00000017079	gnl2	77	82.655	ENSMOCG00000016365	Gnl2	90	82.655	Microtus_ochrogaster
ENSIPUG00000017079	gnl2	99	72.067	ENSMMOG00000018551	gnl2	99	72.563	Mola_mola
ENSIPUG00000017079	gnl2	97	67.877	ENSMODG00000017773	GNL2	96	67.967	Monodelphis_domestica
ENSIPUG00000017079	gnl2	98	74.757	ENSMALG00000011736	gnl2	96	75.105	Monopterus_albus
ENSIPUG00000017079	gnl2	99	66.577	MGP_CAROLIEiJ_G0026458	Gnl2	99	65.949	Mus_caroli
ENSIPUG00000017079	gnl2	99	66.353	ENSMUSG00000028869	Gnl2	99	65.680	Mus_musculus
ENSIPUG00000017079	gnl2	99	66.533	MGP_PahariEiJ_G0028789	Gnl2	99	65.863	Mus_pahari
ENSIPUG00000017079	gnl2	99	66.443	MGP_SPRETEiJ_G0027437	Gnl2	99	65.772	Mus_spretus
ENSIPUG00000017079	gnl2	98	67.671	ENSMPUG00000014709	GNL2	96	67.036	Mustela_putorius_furo
ENSIPUG00000017079	gnl2	98	67.394	ENSMLUG00000017139	GNL2	96	67.082	Myotis_lucifugus
ENSIPUG00000017079	gnl2	99	66.533	ENSNGAG00000005990	Gnl2	96	67.082	Nannospalax_galili
ENSIPUG00000017079	gnl2	99	73.243	ENSNBRG00000010291	gnl2	99	74.185	Neolamprologus_brichardi
ENSIPUG00000017079	gnl2	99	66.846	ENSNLEG00000011599	GNL2	96	67.409	Nomascus_leucogenys
ENSIPUG00000017079	gnl2	93	60.557	ENSMEUG00000015141	GNL2	99	60.206	Notamacropus_eugenii
ENSIPUG00000017079	gnl2	98	59.783	ENSOPRG00000002625	GNL2	96	58.953	Ochotona_princeps
ENSIPUG00000017079	gnl2	98	65.235	ENSOANG00000002057	GNL2	95	65.686	Ornithorhynchus_anatinus
ENSIPUG00000017079	gnl2	100	66.442	ENSOCUG00000010877	GNL2	96	67.222	Oryctolagus_cuniculus
ENSIPUG00000017079	gnl2	100	72.778	ENSORLG00000014645	gnl2	99	73.279	Oryzias_latipes
ENSIPUG00000017079	gnl2	100	73.194	ENSORLG00020018867	gnl2	99	73.889	Oryzias_latipes_hni
ENSIPUG00000017079	gnl2	100	73.472	ENSORLG00015003936	gnl2	99	74.444	Oryzias_latipes_hsok
ENSIPUG00000017079	gnl2	100	74.932	ENSOMEG00000019611	gnl2	99	74.966	Oryzias_melastigma
ENSIPUG00000017079	gnl2	98	64.411	ENSOGAG00000008643	GNL2	96	64.552	Otolemur_garnettii
ENSIPUG00000017079	gnl2	99	67.564	ENSOARG00000019788	GNL2	96	67.857	Ovis_aries
ENSIPUG00000017079	gnl2	99	67.651	ENSPPAG00000001559	GNL2	88	67.961	Pan_paniscus
ENSIPUG00000017079	gnl2	98	67.671	ENSPPRG00000010528	GNL2	96	66.944	Panthera_pardus
ENSIPUG00000017079	gnl2	98	67.808	ENSPTIG00000015095	GNL2	96	67.083	Panthera_tigris_altaica
ENSIPUG00000017079	gnl2	99	67.383	ENSPTRG00000000549	GNL2	96	67.684	Pan_troglodytes
ENSIPUG00000017079	gnl2	99	66.846	ENSPANG00000025285	GNL2	99	65.768	Papio_anubis
ENSIPUG00000017079	gnl2	100	71.156	ENSPKIG00000005438	gnl2	100	70.476	Paramormyrops_kingsleyae
ENSIPUG00000017079	gnl2	94	67.192	ENSPSIG00000007800	GNL2	96	67.385	Pelodiscus_sinensis
ENSIPUG00000017079	gnl2	99	69.945	ENSPMGG00000002306	gnl2	99	70.056	Periophthalmus_magnuspinnatus
ENSIPUG00000017079	gnl2	99	66.577	ENSPEMG00000021234	Gnl2	96	66.992	Peromyscus_maniculatus_bairdii
ENSIPUG00000017079	gnl2	97	60.858	ENSPMAG00000000974	gnl2	99	60.243	Petromyzon_marinus
ENSIPUG00000017079	gnl2	97	67.742	ENSPCIG00000000135	GNL2	96	68.163	Phascolarctos_cinereus
ENSIPUG00000017079	gnl2	100	74.425	ENSPFOG00000012893	gnl2	99	74.696	Poecilia_formosa
ENSIPUG00000017079	gnl2	96	74.435	ENSPLAG00000012483	gnl2	99	74.718	Poecilia_latipinna
ENSIPUG00000017079	gnl2	96	74.079	ENSPMEG00000019133	gnl2	99	74.716	Poecilia_mexicana
ENSIPUG00000017079	gnl2	100	73.684	ENSPREG00000005988	gnl2	99	73.954	Poecilia_reticulata
ENSIPUG00000017079	gnl2	99	66.712	ENSPPYG00000001529	GNL2	99	66.442	Pongo_abelii
ENSIPUG00000017079	gnl2	85	81.481	ENSPCAG00000015772	GNL2	81	81.481	Procavia_capensis
ENSIPUG00000017079	gnl2	99	67.162	ENSPCOG00000016681	GNL2	96	68.011	Propithecus_coquereli
ENSIPUG00000017079	gnl2	86	77.358	ENSPVAG00000010131	GNL2	84	77.358	Pteropus_vampyrus
ENSIPUG00000017079	gnl2	100	83.175	ENSPNAG00000005426	gnl2	100	83.446	Pygocentrus_nattereri
ENSIPUG00000017079	gnl2	99	65.906	ENSRNOG00000009430	Gnl2	96	65.840	Rattus_norvegicus
ENSIPUG00000017079	gnl2	98	67.582	ENSRBIG00000038390	GNL2	99	66.307	Rhinopithecus_bieti
ENSIPUG00000017079	gnl2	99	67.651	ENSRROG00000014347	GNL2	99	66.846	Rhinopithecus_roxellana
ENSIPUG00000017079	gnl2	62	57.143	YNR053C	NOG2	94	56.739	Saccharomyces_cerevisiae
ENSIPUG00000017079	gnl2	99	67.114	ENSSBOG00000020194	GNL2	99	64.966	Saimiri_boliviensis_boliviensis
ENSIPUG00000017079	gnl2	97	66.760	ENSSHAG00000012267	GNL2	96	66.852	Sarcophilus_harrisii
ENSIPUG00000017079	gnl2	100	73.297	ENSSFOG00015020300	gnl2	100	72.888	Scleropages_formosus
ENSIPUG00000017079	gnl2	99	73.431	ENSSMAG00000003472	gnl2	99	74.064	Scophthalmus_maximus
ENSIPUG00000017079	gnl2	100	75.804	ENSSDUG00000010382	gnl2	100	76.084	Seriola_dumerili
ENSIPUG00000017079	gnl2	100	75.408	ENSSLDG00000003122	gnl2	100	75.679	Seriola_lalandi_dorsalis
ENSIPUG00000017079	gnl2	98	66.437	ENSSARG00000011342	GNL2	96	65.969	Sorex_araneus
ENSIPUG00000017079	gnl2	97	67.927	ENSSPUG00000003826	GNL2	96	66.713	Sphenodon_punctatus
ENSIPUG00000017079	gnl2	99	76.087	ENSSPAG00000017473	gnl2	99	76.184	Stegastes_partitus
ENSIPUG00000017079	gnl2	99	65.831	ENSSSCG00000031631	GNL2	99	66.487	Sus_scrofa
ENSIPUG00000017079	gnl2	97	66.713	ENSTGUG00000001547	GNL2	96	66.528	Taeniopygia_guttata
ENSIPUG00000017079	gnl2	99	73.533	ENSTRUG00000009789	gnl2	99	73.469	Takifugu_rubripes
ENSIPUG00000017079	gnl2	100	72.838	ENSTNIG00000003733	gnl2	100	72.222	Tetraodon_nigroviridis
ENSIPUG00000017079	gnl2	98	61.528	ENSTBEG00000003443	GNL2	96	60.304	Tupaia_belangeri
ENSIPUG00000017079	gnl2	98	66.894	ENSTTRG00000008600	GNL2	96	66.989	Tursiops_truncatus
ENSIPUG00000017079	gnl2	98	67.852	ENSUAMG00000014123	GNL2	96	67.268	Ursus_americanus
ENSIPUG00000017079	gnl2	98	64.005	ENSUMAG00000000413	GNL2	96	63.512	Ursus_maritimus
ENSIPUG00000017079	gnl2	98	62.791	ENSVPAG00000001579	GNL2	96	61.997	Vicugna_pacos
ENSIPUG00000017079	gnl2	98	67.896	ENSVVUG00000023157	GNL2	96	67.867	Vulpes_vulpes
ENSIPUG00000017079	gnl2	97	68.436	ENSXETG00000002161	gnl2	96	67.967	Xenopus_tropicalis
ENSIPUG00000017079	gnl2	100	73.147	ENSXCOG00000001649	gnl2	99	73.427	Xiphophorus_couchianus
ENSIPUG00000017079	gnl2	100	73.848	ENSXMAG00000014898	gnl2	99	74.119	Xiphophorus_maculatus
ENSIPUG00000017079	gnl2	66	90.213	ENSXMAG00000026406	-	97	90.213	Xiphophorus_maculatus