EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000017232 (Gene tree)
Gene ID: 108273482
Gene Symbol: tdrd1
Alias: im:7155161
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 10470 bases
Position: chr13:14087938-14098407
Accession: 108273482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000025490	TUDOR	PF00567.24	7e-114	1	4
ENSIPUP00000025490	TUDOR	PF00567.24	7e-114	2	4
ENSIPUP00000025490	TUDOR	PF00567.24	7e-114	3	4
ENSIPUP00000025490	TUDOR	PF00567.24	7e-114	4	4
ENSIPUP00000025537	TUDOR	PF00567.24	9.9e-114	1	4
ENSIPUP00000025537	TUDOR	PF00567.24	9.9e-114	2	4
ENSIPUP00000025537	TUDOR	PF00567.24	9.9e-114	3	4
ENSIPUP00000025537	TUDOR	PF00567.24	9.9e-114	4	4
ENSIPUP00000025537	SMN	PF06003.12	1.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000026595	-	3231	-	ENSIPUP00000025537	1076 (aa)	-	-
ENSIPUT00000026544	-	4431	XM_017482732	ENSIPUP00000025490	1153 (aa)	XP_017338221	A0A2D0S673

Gene Model

Click here to download ENSIPUG00000017232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000017232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000017232	tdrd1	79	30.769	ENSIPUG00000023805	tdrd6	75	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000017232	tdrd1	90	36.030	ENSG00000095627	TDRD1	82	35.814	Homo_sapiens
ENSIPUG00000017232	tdrd1	100	47.373	ENSAPOG00000023199	tdrd1	99	47.373	Acanthochromis_polyacanthus
ENSIPUG00000017232	tdrd1	88	33.636	ENSAMEG00000015182	TDRD1	86	33.467	Ailuropoda_melanoleuca
ENSIPUG00000017232	tdrd1	98	48.887	ENSACIG00000010576	tdrd1	96	47.749	Amphilophus_citrinellus
ENSIPUG00000017232	tdrd1	100	51.424	ENSAOCG00000007059	tdrd1	100	51.586	Amphiprion_ocellaris
ENSIPUG00000017232	tdrd1	100	46.271	ENSAPEG00000017049	tdrd1	98	46.401	Amphiprion_percula
ENSIPUG00000017232	tdrd1	96	50.094	ENSATEG00000021627	tdrd1	91	50.094	Anabas_testudineus
ENSIPUG00000017232	tdrd1	94	33.589	ENSAPLG00000012609	TDRD1	96	33.397	Anas_platyrhynchos
ENSIPUG00000017232	tdrd1	89	33.841	ENSACAG00000009854	TDRD1	79	33.581	Anolis_carolinensis
ENSIPUG00000017232	tdrd1	89	36.452	ENSANAG00000035710	TDRD1	84	36.452	Aotus_nancymaae
ENSIPUG00000017232	tdrd1	100	46.045	ENSACLG00000014107	tdrd1	99	46.045	Astatotilapia_calliptera
ENSIPUG00000017232	tdrd1	100	67.866	ENSAMXG00000015146	tdrd1	100	67.866	Astyanax_mexicanus
ENSIPUG00000017232	tdrd1	91	33.797	ENSBTAG00000006855	TDRD1	85	33.135	Bos_taurus
ENSIPUG00000017232	tdrd1	92	35.875	ENSCJAG00000019270	TDRD1	84	34.690	Callithrix_jacchus
ENSIPUG00000017232	tdrd1	90	33.532	ENSCAFG00000011266	TDRD1	87	33.333	Canis_familiaris
ENSIPUG00000017232	tdrd1	89	34.624	ENSCAFG00020012373	TDRD1	86	33.333	Canis_lupus_dingo
ENSIPUG00000017232	tdrd1	90	33.796	ENSCHIG00000012766	TDRD1	86	33.953	Capra_hircus
ENSIPUG00000017232	tdrd1	89	35.005	ENSTSYG00000004935	TDRD1	82	35.219	Carlito_syrichta
ENSIPUG00000017232	tdrd1	79	53.846	ENSCPOG00000004190	TDRD1	78	53.846	Cavia_porcellus
ENSIPUG00000017232	tdrd1	92	36.921	ENSCCAG00000027375	TDRD1	84	35.955	Cebus_capucinus
ENSIPUG00000017232	tdrd1	89	37.097	ENSCATG00000035999	TDRD1	85	36.774	Cercocebus_atys
ENSIPUG00000017232	tdrd1	88	35.041	ENSCLAG00000003935	TDRD1	84	34.836	Chinchilla_lanigera
ENSIPUG00000017232	tdrd1	89	37.069	ENSCSAG00000005071	TDRD1	84	36.961	Chlorocebus_sabaeus
ENSIPUG00000017232	tdrd1	94	39.706	ENSCHOG00000001690	TDRD1	78	40.476	Choloepus_hoffmanni
ENSIPUG00000017232	tdrd1	90	37.057	ENSCPBG00000003780	TDRD1	84	34.966	Chrysemys_picta_bellii
ENSIPUG00000017232	tdrd1	89	36.961	ENSCANG00000035172	TDRD1	82	36.746	Colobus_angolensis_palliatus
ENSIPUG00000017232	tdrd1	87	35.080	ENSCGRG00001004632	Tdrd1	85	34.602	Cricetulus_griseus_chok1gshd
ENSIPUG00000017232	tdrd1	88	34.990	ENSCGRG00000004981	Tdrd1	82	34.565	Cricetulus_griseus_crigri
ENSIPUG00000017232	tdrd1	95	42.378	ENSCSEG00000006983	tdrd1	98	41.268	Cynoglossus_semilaevis
ENSIPUG00000017232	tdrd1	89	46.584	ENSCVAG00000020980	tdrd1	93	46.584	Cyprinodon_variegatus
ENSIPUG00000017232	tdrd1	99	57.904	ENSDARG00000007465	tdrd1	99	57.904	Danio_rerio
ENSIPUG00000017232	tdrd1	91	34.727	ENSDNOG00000012114	TDRD1	85	32.787	Dasypus_novemcinctus
ENSIPUG00000017232	tdrd1	88	34.109	ENSDORG00000009986	Tdrd1	82	33.635	Dipodomys_ordii
ENSIPUG00000017232	tdrd1	88	32.410	ENSETEG00000020143	TDRD1	82	32.028	Echinops_telfairi
ENSIPUG00000017232	tdrd1	89	33.689	ENSEASG00005014802	TDRD1	86	32.454	Equus_asinus_asinus
ENSIPUG00000017232	tdrd1	89	34.593	ENSECAG00000009748	TDRD1	83	33.171	Equus_caballus
ENSIPUG00000017232	tdrd1	88	32.860	ENSEEUG00000010076	TDRD1	84	32.860	Erinaceus_europaeus
ENSIPUG00000017232	tdrd1	99	52.946	ENSELUG00000024364	tdrd1	99	52.946	Esox_lucius
ENSIPUG00000017232	tdrd1	89	34.769	ENSFCAG00000000632	TDRD1	85	34.173	Felis_catus
ENSIPUG00000017232	tdrd1	86	33.846	ENSFALG00000002237	TDRD1	95	35.510	Ficedula_albicollis
ENSIPUG00000017232	tdrd1	88	34.600	ENSFDAG00000013225	TDRD1	87	34.416	Fukomys_damarensis
ENSIPUG00000017232	tdrd1	96	38.053	ENSFHEG00000009203	tdrd1	98	37.130	Fundulus_heteroclitus
ENSIPUG00000017232	tdrd1	77	50.000	ENSGMOG00000016797	-	69	50.000	Gadus_morhua
ENSIPUG00000017232	tdrd1	93	32.692	ENSGALG00000046180	TDRD1	93	33.134	Gallus_gallus
ENSIPUG00000017232	tdrd1	92	47.133	ENSGAFG00000002668	tdrd1	99	44.000	Gambusia_affinis
ENSIPUG00000017232	tdrd1	85	49.523	ENSGACG00000006590	tdrd1	100	49.523	Gasterosteus_aculeatus
ENSIPUG00000017232	tdrd1	89	35.745	ENSGGOG00000004250	TDRD1	84	35.529	Gorilla_gorilla
ENSIPUG00000017232	tdrd1	100	46.539	ENSHBUG00000005216	tdrd1	99	46.539	Haplochromis_burtoni
ENSIPUG00000017232	tdrd1	88	33.094	ENSHGLG00000010877	TDRD1	85	32.787	Heterocephalus_glaber_female
ENSIPUG00000017232	tdrd1	87	35.288	ENSHGLG00100013857	TDRD1	87	34.952	Heterocephalus_glaber_male
ENSIPUG00000017232	tdrd1	97	42.194	ENSHCOG00000002840	tdrd1	99	37.175	Hippocampus_comes
ENSIPUG00000017232	tdrd1	89	35.015	ENSSTOG00000003221	TDRD1	85	34.770	Ictidomys_tridecemlineatus
ENSIPUG00000017232	tdrd1	88	34.221	ENSJJAG00000014720	Tdrd1	85	34.181	Jaculus_jaculus
ENSIPUG00000017232	tdrd1	90	50.400	ENSKMAG00000018558	tdrd1	92	50.249	Kryptolebias_marmoratus
ENSIPUG00000017232	tdrd1	98	47.532	ENSLBEG00000004161	tdrd1	98	45.634	Labrus_bergylta
ENSIPUG00000017232	tdrd1	93	36.311	ENSLACG00000011559	TDRD1	88	35.449	Latimeria_chalumnae
ENSIPUG00000017232	tdrd1	99	43.262	ENSLOCG00000012030	tdrd1	100	47.072	Lepisosteus_oculatus
ENSIPUG00000017232	tdrd1	81	34.637	ENSLAFG00000011575	TDRD1	98	34.413	Loxodonta_africana
ENSIPUG00000017232	tdrd1	89	37.097	ENSMFAG00000043487	TDRD1	84	36.774	Macaca_fascicularis
ENSIPUG00000017232	tdrd1	89	37.097	ENSMMUG00000022517	TDRD1	84	36.774	Macaca_mulatta
ENSIPUG00000017232	tdrd1	89	36.989	ENSMNEG00000031108	TDRD1	84	36.667	Macaca_nemestrina
ENSIPUG00000017232	tdrd1	89	37.097	ENSMLEG00000032281	TDRD1	82	36.774	Mandrillus_leucophaeus
ENSIPUG00000017232	tdrd1	96	50.236	ENSMAMG00000015287	tdrd1	93	50.236	Mastacembelus_armatus
ENSIPUG00000017232	tdrd1	100	46.327	ENSMZEG00005025315	tdrd1	99	46.327	Maylandia_zebra
ENSIPUG00000017232	tdrd1	93	32.860	ENSMGAG00000011067	TDRD1	99	33.367	Meleagris_gallopavo
ENSIPUG00000017232	tdrd1	80	37.011	ENSMAUG00000012164	Tdrd1	78	36.905	Mesocricetus_auratus
ENSIPUG00000017232	tdrd1	93	32.310	ENSMICG00000016190	TDRD1	85	35.086	Microcebus_murinus
ENSIPUG00000017232	tdrd1	89	35.448	ENSMOCG00000022360	Tdrd1	85	35.347	Microtus_ochrogaster
ENSIPUG00000017232	tdrd1	96	49.057	ENSMMOG00000014068	tdrd1	99	45.973	Mola_mola
ENSIPUG00000017232	tdrd1	93	33.429	ENSMODG00000009788	TDRD1	85	33.591	Monodelphis_domestica
ENSIPUG00000017232	tdrd1	98	46.928	ENSMALG00000022115	tdrd1	97	48.466	Monopterus_albus
ENSIPUG00000017232	tdrd1	88	35.097	MGP_CAROLIEiJ_G0023095	Tdrd1	86	34.735	Mus_caroli
ENSIPUG00000017232	tdrd1	88	35.132	ENSMUSG00000025081	Tdrd1	86	35.010	Mus_musculus
ENSIPUG00000017232	tdrd1	93	34.006	MGP_PahariEiJ_G0014583	Tdrd1	86	33.675	Mus_pahari
ENSIPUG00000017232	tdrd1	88	35.336	MGP_SPRETEiJ_G0024016	Tdrd1	86	35.070	Mus_spretus
ENSIPUG00000017232	tdrd1	82	34.106	ENSMPUG00000001987	TDRD1	78	34.928	Mustela_putorius_furo
ENSIPUG00000017232	tdrd1	88	33.879	ENSNGAG00000015231	Tdrd1	85	33.879	Nannospalax_galili
ENSIPUG00000017232	tdrd1	98	48.420	ENSNBRG00000017920	tdrd1	99	46.371	Neolamprologus_brichardi
ENSIPUG00000017232	tdrd1	94	42.361	ENSNLEG00000016228	TDRD1	88	44.615	Nomascus_leucogenys
ENSIPUG00000017232	tdrd1	90	33.034	ENSMEUG00000007717	TDRD1	82	33.034	Notamacropus_eugenii
ENSIPUG00000017232	tdrd1	89	34.700	ENSOPRG00000009180	TDRD1	84	34.600	Ochotona_princeps
ENSIPUG00000017232	tdrd1	88	35.021	ENSODEG00000011965	TDRD1	85	34.483	Octodon_degus
ENSIPUG00000017232	tdrd1	100	46.313	ENSONIG00000016382	tdrd1	100	46.313	Oreochromis_niloticus
ENSIPUG00000017232	tdrd1	93	33.556	ENSOANG00000001562	TDRD1	87	33.556	Ornithorhynchus_anatinus
ENSIPUG00000017232	tdrd1	89	35.513	ENSOCUG00000025327	TDRD1	88	34.778	Oryctolagus_cuniculus
ENSIPUG00000017232	tdrd1	99	44.961	ENSORLG00000004833	tdrd1	99	45.069	Oryzias_latipes
ENSIPUG00000017232	tdrd1	99	44.549	ENSORLG00020019231	tdrd1	99	44.549	Oryzias_latipes_hni
ENSIPUG00000017232	tdrd1	99	44.606	ENSORLG00015017184	tdrd1	99	44.606	Oryzias_latipes_hsok
ENSIPUG00000017232	tdrd1	99	43.347	ENSOMEG00000023637	tdrd1	98	43.347	Oryzias_melastigma
ENSIPUG00000017232	tdrd1	93	32.729	ENSOGAG00000001370	TDRD1	84	35.837	Otolemur_garnettii
ENSIPUG00000017232	tdrd1	90	33.796	ENSOARG00000014200	-	85	33.953	Ovis_aries
ENSIPUG00000017232	tdrd1	90	35.922	ENSPPAG00000041621	TDRD1	84	35.707	Pan_paniscus
ENSIPUG00000017232	tdrd1	89	34.661	ENSPPRG00000000191	TDRD1	85	34.073	Panthera_pardus
ENSIPUG00000017232	tdrd1	89	34.811	ENSPTIG00000010264	TDRD1	86	33.871	Panthera_tigris_altaica
ENSIPUG00000017232	tdrd1	90	35.922	ENSPTRG00000002958	TDRD1	84	35.591	Pan_troglodytes
ENSIPUG00000017232	tdrd1	89	36.882	ENSPANG00000020752	TDRD1	85	36.559	Papio_anubis
ENSIPUG00000017232	tdrd1	94	48.130	ENSPKIG00000010586	tdrd1	92	47.897	Paramormyrops_kingsleyae
ENSIPUG00000017232	tdrd1	94	33.065	ENSPSIG00000014655	TDRD1	85	33.065	Pelodiscus_sinensis
ENSIPUG00000017232	tdrd1	75	73.529	ENSPMGG00000018890	tdrd1	94	73.529	Periophthalmus_magnuspinnatus
ENSIPUG00000017232	tdrd1	93	34.390	ENSPEMG00000004582	Tdrd1	85	34.102	Peromyscus_maniculatus_bairdii
ENSIPUG00000017232	tdrd1	78	31.068	ENSPMAG00000004416	-	100	31.068	Petromyzon_marinus
ENSIPUG00000017232	tdrd1	93	34.100	ENSPCIG00000009739	TDRD1	84	33.849	Phascolarctos_cinereus
ENSIPUG00000017232	tdrd1	91	45.161	ENSPFOG00000002145	tdrd1	99	45.161	Poecilia_formosa
ENSIPUG00000017232	tdrd1	100	43.943	ENSPLAG00000010241	tdrd1	100	43.943	Poecilia_latipinna
ENSIPUG00000017232	tdrd1	92	47.441	ENSPMEG00000021893	tdrd1	89	47.312	Poecilia_mexicana
ENSIPUG00000017232	tdrd1	98	45.918	ENSPREG00000022663	tdrd1	99	43.771	Poecilia_reticulata
ENSIPUG00000017232	tdrd1	87	35.847	ENSPPYG00000002671	TDRD1	83	35.628	Pongo_abelii
ENSIPUG00000017232	tdrd1	89	34.094	ENSPCAG00000006692	TDRD1	71	33.704	Procavia_capensis
ENSIPUG00000017232	tdrd1	92	33.887	ENSPCOG00000026619	TDRD1	82	34.595	Propithecus_coquereli
ENSIPUG00000017232	tdrd1	90	33.333	ENSPVAG00000003055	TDRD1	82	33.333	Pteropus_vampyrus
ENSIPUG00000017232	tdrd1	98	47.834	ENSPNYG00000001706	tdrd1	99	45.770	Pundamilia_nyererei
ENSIPUG00000017232	tdrd1	98	69.991	ENSPNAG00000005831	tdrd1	97	69.774	Pygocentrus_nattereri
ENSIPUG00000017232	tdrd1	89	35.065	ENSRNOG00000017064	Tdrd1	86	34.646	Rattus_norvegicus
ENSIPUG00000017232	tdrd1	89	36.735	ENSRBIG00000029668	TDRD1	84	36.520	Rhinopithecus_bieti
ENSIPUG00000017232	tdrd1	89	36.853	ENSRROG00000043379	TDRD1	84	36.638	Rhinopithecus_roxellana
ENSIPUG00000017232	tdrd1	89	36.921	ENSSBOG00000023561	TDRD1	80	36.814	Saimiri_boliviensis_boliviensis
ENSIPUG00000017232	tdrd1	93	33.719	ENSSHAG00000014311	TDRD1	85	33.719	Sarcophilus_harrisii
ENSIPUG00000017232	tdrd1	89	45.200	ENSSFOG00015022020	tdrd1	98	43.679	Scleropages_formosus
ENSIPUG00000017232	tdrd1	98	48.192	ENSSMAG00000019271	tdrd1	98	47.627	Scophthalmus_maximus
ENSIPUG00000017232	tdrd1	96	52.034	ENSSDUG00000022012	tdrd1	97	51.437	Seriola_dumerili
ENSIPUG00000017232	tdrd1	96	51.561	ENSSLDG00000006423	tdrd1	98	49.776	Seriola_lalandi_dorsalis
ENSIPUG00000017232	tdrd1	89	36.538	ENSSARG00000008828	TDRD1	68	36.538	Sorex_araneus
ENSIPUG00000017232	tdrd1	79	56.410	ENSSPUG00000005015	TDRD1	83	56.410	Sphenodon_punctatus
ENSIPUG00000017232	tdrd1	99	47.290	ENSSPAG00000018805	tdrd1	99	47.198	Stegastes_partitus
ENSIPUG00000017232	tdrd1	90	33.929	ENSSSCG00000021075	TDRD1	85	33.829	Sus_scrofa
ENSIPUG00000017232	tdrd1	85	34.262	ENSTGUG00000010905	TDRD1	97	34.306	Taeniopygia_guttata
ENSIPUG00000017232	tdrd1	96	45.243	ENSTRUG00000012142	tdrd1	100	45.695	Takifugu_rubripes
ENSIPUG00000017232	tdrd1	83	42.088	ENSTNIG00000018898	tdrd1	100	42.803	Tetraodon_nigroviridis
ENSIPUG00000017232	tdrd1	91	36.041	ENSTBEG00000014417	-	84	32.210	Tupaia_belangeri
ENSIPUG00000017232	tdrd1	89	33.133	ENSTTRG00000010147	TDRD1	84	32.769	Tursiops_truncatus
ENSIPUG00000017232	tdrd1	88	34.419	ENSUAMG00000009025	TDRD1	86	33.502	Ursus_americanus
ENSIPUG00000017232	tdrd1	88	34.549	ENSUMAG00000000705	TDRD1	86	34.004	Ursus_maritimus
ENSIPUG00000017232	tdrd1	88	34.242	ENSVPAG00000004000	TDRD1	83	34.343	Vicugna_pacos
ENSIPUG00000017232	tdrd1	90	33.831	ENSVVUG00000009750	TDRD1	87	33.529	Vulpes_vulpes
ENSIPUG00000017232	tdrd1	85	45.993	ENSXCOG00000006412	tdrd1	100	45.993	Xiphophorus_couchianus
ENSIPUG00000017232	tdrd1	96	46.925	ENSXMAG00000008104	tdrd1	100	44.804	Xiphophorus_maculatus