EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000017291 (Gene tree)
Gene ID: 108272165
Gene Symbol: eefsec
Alias: zgc:123265
Full Name: eukaryotic elongation factor%2C selenocysteine-tRNA specific
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 13290 bases
Position: chr11:14570474-14583763
Accession: 108272165
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000025590	GTP_EFTU	PF00009.27	3.8e-28	1	1
ENSIPUP00000025620	GTP_EFTU	PF00009.27	4.2e-28	1	1
ENSIPUP00000025581	GTP_EFTU	PF00009.27	4.3e-28	1	1
ENSIPUP00000025590	MMR_HSR1	PF01926.23	2.3e-06	1	1
ENSIPUP00000025620	MMR_HSR1	PF01926.23	2.3e-06	1	1
ENSIPUP00000025581	MMR_HSR1	PF01926.23	2.7e-06	1	1
ENSIPUP00000025590	GTP_EFTU_D2	PF03144.25	2.9e-08	1	1
ENSIPUP00000025581	GTP_EFTU_D2	PF03144.25	3.3e-08	1	1
ENSIPUP00000025620	GTP_EFTU_D2	PF03144.25	3.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000026681	-	1617	-	ENSIPUP00000025620	538 (aa)	-	-
ENSIPUT00000026634	-	4711	XM_017480410	ENSIPUP00000025581	580 (aa)	XP_017335899	W5U752
ENSIPUT00000026650	-	2858	XM_017480411	ENSIPUP00000025590	522 (aa)	XP_017335900	A0A2D0S113

Gene Model

Click here to download ENSIPUG00000017291's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000017291's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000017291	eefsec	97	65.177	ENSG00000132394	EEFSEC	99	62.104	Homo_sapiens
ENSIPUG00000017291	eefsec	99	75.304	ENSAPOG00000015931	eefsec	99	75.436	Acanthochromis_polyacanthus
ENSIPUG00000017291	eefsec	81	64.545	ENSAMEG00000015165	EEFSEC	87	64.612	Ailuropoda_melanoleuca
ENSIPUG00000017291	eefsec	60	86.538	ENSACIG00000022407	eefsec	99	79.545	Amphilophus_citrinellus
ENSIPUG00000017291	eefsec	98	76.654	ENSAOCG00000008603	eefsec	99	75.784	Amphiprion_ocellaris
ENSIPUG00000017291	eefsec	99	74.699	ENSAPEG00000017090	eefsec	99	74.828	Amphiprion_percula
ENSIPUG00000017291	eefsec	99	75.382	ENSATEG00000002753	eefsec	99	74.483	Anabas_testudineus
ENSIPUG00000017291	eefsec	80	67.209	ENSAPLG00000006745	EEFSEC	99	67.209	Anas_platyrhynchos
ENSIPUG00000017291	eefsec	97	63.941	ENSANAG00000032691	EEFSEC	99	61.000	Aotus_nancymaae
ENSIPUG00000017291	eefsec	98	75.530	ENSACLG00000024565	eefsec	99	78.731	Astatotilapia_calliptera
ENSIPUG00000017291	eefsec	100	86.667	ENSAMXG00000002260	eefsec	100	86.667	Astyanax_mexicanus
ENSIPUG00000017291	eefsec	97	65.226	ENSBTAG00000030962	EEFSEC	99	69.685	Bos_taurus
ENSIPUG00000017291	eefsec	96	32.554	WBGene00008133	efsc-1	92	32.308	Caenorhabditis_elegans
ENSIPUG00000017291	eefsec	97	64.126	ENSCJAG00000005387	EEFSEC	99	61.000	Callithrix_jacchus
ENSIPUG00000017291	eefsec	97	64.022	ENSCAFG00000004135	EEFSEC	80	61.488	Canis_familiaris
ENSIPUG00000017291	eefsec	97	64.022	ENSCAFG00020004811	EEFSEC	99	61.488	Canis_lupus_dingo
ENSIPUG00000017291	eefsec	97	65.649	ENSCHIG00000021838	EEFSEC	99	63.185	Capra_hircus
ENSIPUG00000017291	eefsec	97	64.991	ENSTSYG00000012922	EEFSEC	99	61.937	Carlito_syrichta
ENSIPUG00000017291	eefsec	80	58.945	ENSCAPG00000000084	EEFSEC	98	56.539	Cavia_aperea
ENSIPUG00000017291	eefsec	97	65.779	ENSCPOG00000024352	EEFSEC	98	68.321	Cavia_porcellus
ENSIPUG00000017291	eefsec	97	64.432	ENSCCAG00000031336	EEFSEC	99	61.269	Cebus_capucinus
ENSIPUG00000017291	eefsec	97	64.804	ENSCATG00000019414	EEFSEC	99	61.770	Cercocebus_atys
ENSIPUG00000017291	eefsec	97	65.649	ENSCLAG00000006973	EEFSEC	98	68.321	Chinchilla_lanigera
ENSIPUG00000017291	eefsec	97	64.804	ENSCSAG00000008599	EEFSEC	99	61.770	Chlorocebus_sabaeus
ENSIPUG00000017291	eefsec	98	68.381	ENSCPBG00000014356	EEFSEC	87	68.381	Chrysemys_picta_bellii
ENSIPUG00000017291	eefsec	97	58.949	ENSCSAVG00000002208	-	100	56.757	Ciona_savignyi
ENSIPUG00000017291	eefsec	97	64.925	ENSCANG00000031492	EEFSEC	99	62.207	Colobus_angolensis_palliatus
ENSIPUG00000017291	eefsec	97	66.603	ENSCGRG00001018089	Eefsec	99	63.605	Cricetulus_griseus_chok1gshd
ENSIPUG00000017291	eefsec	97	66.221	ENSCGRG00000010063	Eefsec	97	68.077	Cricetulus_griseus_crigri
ENSIPUG00000017291	eefsec	97	75.922	ENSCSEG00000003008	eefsec	99	79.545	Cynoglossus_semilaevis
ENSIPUG00000017291	eefsec	99	73.484	ENSCVAG00000005381	eefsec	99	73.484	Cyprinodon_variegatus
ENSIPUG00000017291	eefsec	98	85.380	ENSDARG00000004696	eefsec	99	84.991	Danio_rerio
ENSIPUG00000017291	eefsec	97	64.906	ENSDNOG00000008925	EEFSEC	99	61.929	Dasypus_novemcinctus
ENSIPUG00000017291	eefsec	82	51.220	ENSDORG00000000264	Eefsec	80	73.585	Dipodomys_ordii
ENSIPUG00000017291	eefsec	96	50.696	FBgn0034627	eEFSec	95	50.292	Drosophila_melanogaster
ENSIPUG00000017291	eefsec	98	56.155	ENSETEG00000007406	EEFSEC	99	55.892	Echinops_telfairi
ENSIPUG00000017291	eefsec	79	73.469	ENSEBUG00000015029	eefsec	94	51.238	Eptatretus_burgeri
ENSIPUG00000017291	eefsec	97	65.363	ENSEASG00005006786	EEFSEC	99	62.375	Equus_asinus_asinus
ENSIPUG00000017291	eefsec	97	65.363	ENSECAG00000016565	EEFSEC	99	62.375	Equus_caballus
ENSIPUG00000017291	eefsec	97	72.973	ENSELUG00000016632	eefsec	98	71.799	Esox_lucius
ENSIPUG00000017291	eefsec	97	64.935	ENSFCAG00000006153	EEFSEC	99	62.230	Felis_catus
ENSIPUG00000017291	eefsec	82	65.235	ENSFALG00000007901	EEFSEC	99	65.235	Ficedula_albicollis
ENSIPUG00000017291	eefsec	80	65.207	ENSFDAG00000010243	EEFSEC	99	61.290	Fukomys_damarensis
ENSIPUG00000017291	eefsec	98	75.728	ENSFHEG00000007155	eefsec	99	75.000	Fundulus_heteroclitus
ENSIPUG00000017291	eefsec	98	70.930	ENSGMOG00000007705	eefsec	99	70.660	Gadus_morhua
ENSIPUG00000017291	eefsec	98	67.939	ENSGALG00000038684	EEFSEC	99	66.438	Gallus_gallus
ENSIPUG00000017291	eefsec	98	73.981	ENSGAFG00000021692	eefsec	99	73.264	Gambusia_affinis
ENSIPUG00000017291	eefsec	98	75.681	ENSGACG00000000793	eefsec	99	75.087	Gasterosteus_aculeatus
ENSIPUG00000017291	eefsec	98	68.381	ENSGAGG00000002059	EEFSEC	98	66.553	Gopherus_agassizii
ENSIPUG00000017291	eefsec	84	65.495	ENSGGOG00000001445	EEFSEC	98	61.896	Gorilla_gorilla
ENSIPUG00000017291	eefsec	98	76.608	ENSHBUG00000008917	eefsec	99	75.436	Haplochromis_burtoni
ENSIPUG00000017291	eefsec	97	66.667	ENSHGLG00000000094	EEFSEC	99	69.333	Heterocephalus_glaber_female
ENSIPUG00000017291	eefsec	97	66.667	ENSHGLG00100011393	EEFSEC	94	63.356	Heterocephalus_glaber_male
ENSIPUG00000017291	eefsec	98	75.581	ENSHCOG00000004193	eefsec	99	73.183	Hippocampus_comes
ENSIPUG00000017291	eefsec	80	63.657	ENSSTOG00000019802	EEFSEC	99	60.649	Ictidomys_tridecemlineatus
ENSIPUG00000017291	eefsec	98	74.805	ENSKMAG00000019907	eefsec	99	73.776	Kryptolebias_marmoratus
ENSIPUG00000017291	eefsec	99	75.390	ENSLBEG00000017908	eefsec	99	75.521	Labrus_bergylta
ENSIPUG00000017291	eefsec	83	69.388	ENSLACG00000013137	EEFSEC	95	67.600	Latimeria_chalumnae
ENSIPUG00000017291	eefsec	98	75.435	ENSLOCG00000014535	eefsec	99	73.090	Lepisosteus_oculatus
ENSIPUG00000017291	eefsec	97	63.740	ENSLAFG00000001997	EEFSEC	99	61.158	Loxodonta_africana
ENSIPUG00000017291	eefsec	97	64.991	ENSMFAG00000042128	EEFSEC	99	61.937	Macaca_fascicularis
ENSIPUG00000017291	eefsec	87	55.556	ENSMMUG00000018663	EEFSEC	99	60.000	Macaca_mulatta
ENSIPUG00000017291	eefsec	97	64.804	ENSMNEG00000028574	EEFSEC	99	61.770	Macaca_nemestrina
ENSIPUG00000017291	eefsec	81	63.781	ENSMLEG00000041771	EEFSEC	93	60.279	Mandrillus_leucophaeus
ENSIPUG00000017291	eefsec	98	75.191	ENSMAMG00000023964	eefsec	99	81.298	Mastacembelus_armatus
ENSIPUG00000017291	eefsec	66	78.731	ENSMZEG00005009380	eefsec	99	78.731	Maylandia_zebra
ENSIPUG00000017291	eefsec	72	65.051	ENSMGAG00000007243	EEFSEC	100	65.051	Meleagris_gallopavo
ENSIPUG00000017291	eefsec	97	66.540	ENSMAUG00000011197	Eefsec	98	68.441	Mesocricetus_auratus
ENSIPUG00000017291	eefsec	97	67.110	ENSMOCG00000017748	Eefsec	98	69.084	Microtus_ochrogaster
ENSIPUG00000017291	eefsec	60	90.000	ENSMMOG00000021820	eefsec	99	79.401	Mola_mola
ENSIPUG00000017291	eefsec	97	67.547	ENSMODG00000008034	EEFSEC	83	66.300	Monodelphis_domestica
ENSIPUG00000017291	eefsec	98	75.337	ENSMALG00000016211	eefsec	98	76.023	Monopterus_albus
ENSIPUG00000017291	eefsec	97	66.414	MGP_CAROLIEiJ_G0028627	Eefsec	98	68.821	Mus_caroli
ENSIPUG00000017291	eefsec	97	66.224	ENSMUSG00000033216	Eefsec	98	68.821	Mus_musculus
ENSIPUG00000017291	eefsec	97	66.034	MGP_PahariEiJ_G0022366	Eefsec	98	68.821	Mus_pahari
ENSIPUG00000017291	eefsec	97	66.034	MGP_SPRETEiJ_G0029640	Eefsec	98	68.821	Mus_spretus
ENSIPUG00000017291	eefsec	97	65.677	ENSMPUG00000017340	EEFSEC	95	62.500	Mustela_putorius_furo
ENSIPUG00000017291	eefsec	81	64.384	ENSMLUG00000004261	EEFSEC	99	61.200	Myotis_lucifugus
ENSIPUG00000017291	eefsec	50	69.084	ENSNGAG00000023278	-	98	69.084	Nannospalax_galili
ENSIPUG00000017291	eefsec	98	75.915	ENSNBRG00000002387	eefsec	99	79.104	Neolamprologus_brichardi
ENSIPUG00000017291	eefsec	97	64.618	ENSNLEG00000014303	EEFSEC	99	61.603	Nomascus_leucogenys
ENSIPUG00000017291	eefsec	80	67.916	ENSMEUG00000005747	EEFSEC	99	64.549	Notamacropus_eugenii
ENSIPUG00000017291	eefsec	98	64.607	ENSOPRG00000011276	EEFSEC	99	62.353	Ochotona_princeps
ENSIPUG00000017291	eefsec	97	66.160	ENSODEG00000002928	EEFSEC	98	67.939	Octodon_degus
ENSIPUG00000017291	eefsec	81	72.537	ENSONIG00000019038	eefsec	100	72.956	Oreochromis_niloticus
ENSIPUG00000017291	eefsec	79	65.640	ENSOANG00000009108	EEFSEC	99	63.561	Ornithorhynchus_anatinus
ENSIPUG00000017291	eefsec	97	65.602	ENSOCUG00000016517	EEFSEC	99	62.901	Oryctolagus_cuniculus
ENSIPUG00000017291	eefsec	98	75.292	ENSORLG00000001377	eefsec	99	76.866	Oryzias_latipes
ENSIPUG00000017291	eefsec	98	75.049	ENSORLG00020000729	eefsec	99	76.866	Oryzias_latipes_hni
ENSIPUG00000017291	eefsec	98	75.292	ENSORLG00015001986	eefsec	99	73.565	Oryzias_latipes_hsok
ENSIPUG00000017291	eefsec	80	73.270	ENSOMEG00000010071	eefsec	89	69.421	Oryzias_melastigma
ENSIPUG00000017291	eefsec	81	63.946	ENSOGAG00000014084	EEFSEC	97	64.091	Otolemur_garnettii
ENSIPUG00000017291	eefsec	70	63.517	ENSOARG00000004600	EEFSEC	100	63.684	Ovis_aries
ENSIPUG00000017291	eefsec	97	65.177	ENSPPAG00000030936	EEFSEC	99	62.104	Pan_paniscus
ENSIPUG00000017291	eefsec	97	65.549	ENSPPRG00000002846	EEFSEC	99	62.333	Panthera_pardus
ENSIPUG00000017291	eefsec	82	63.717	ENSPTIG00000013855	EEFSEC	92	60.311	Panthera_tigris_altaica
ENSIPUG00000017291	eefsec	97	65.177	ENSPTRG00000015353	EEFSEC	99	62.104	Pan_troglodytes
ENSIPUG00000017291	eefsec	97	64.991	ENSPANG00000017041	EEFSEC	99	61.937	Papio_anubis
ENSIPUG00000017291	eefsec	97	73.888	ENSPKIG00000005220	eefsec	97	78.030	Paramormyrops_kingsleyae
ENSIPUG00000017291	eefsec	97	68.077	ENSPSIG00000015135	EEFSEC	99	67.552	Pelodiscus_sinensis
ENSIPUG00000017291	eefsec	97	78.193	ENSPMGG00000020300	eefsec	99	76.491	Periophthalmus_magnuspinnatus
ENSIPUG00000017291	eefsec	97	66.603	ENSPEMG00000013677	Eefsec	98	69.202	Peromyscus_maniculatus_bairdii
ENSIPUG00000017291	eefsec	97	66.730	ENSPMAG00000006779	eefsec	98	66.477	Petromyzon_marinus
ENSIPUG00000017291	eefsec	79	67.221	ENSPCIG00000020494	EEFSEC	99	63.636	Phascolarctos_cinereus
ENSIPUG00000017291	eefsec	98	74.175	ENSPFOG00000003748	eefsec	99	73.264	Poecilia_formosa
ENSIPUG00000017291	eefsec	98	74.081	ENSPLAG00000018012	eefsec	99	73.264	Poecilia_latipinna
ENSIPUG00000017291	eefsec	98	74.369	ENSPMEG00000001202	eefsec	99	73.611	Poecilia_mexicana
ENSIPUG00000017291	eefsec	98	73.684	ENSPREG00000012235	eefsec	99	72.997	Poecilia_reticulata
ENSIPUG00000017291	eefsec	97	64.618	ENSPPYG00000013436	EEFSEC	99	61.603	Pongo_abelii
ENSIPUG00000017291	eefsec	97	57.736	ENSPCAG00000005883	EEFSEC	99	57.765	Procavia_capensis
ENSIPUG00000017291	eefsec	97	63.415	ENSPCOG00000023432	EEFSEC	99	60.606	Propithecus_coquereli
ENSIPUG00000017291	eefsec	60	75.000	ENSPVAG00000007070	EEFSEC	64	67.181	Pteropus_vampyrus
ENSIPUG00000017291	eefsec	97	75.728	ENSPNYG00000005726	eefsec	98	79.545	Pundamilia_nyererei
ENSIPUG00000017291	eefsec	100	87.500	ENSPNAG00000016724	eefsec	100	87.500	Pygocentrus_nattereri
ENSIPUG00000017291	eefsec	97	66.603	ENSRNOG00000012954	Eefsec	99	71.486	Rattus_norvegicus
ENSIPUG00000017291	eefsec	97	64.991	ENSRBIG00000032635	EEFSEC	99	61.937	Rhinopithecus_bieti
ENSIPUG00000017291	eefsec	79	62.937	ENSSBOG00000031478	EEFSEC	99	59.267	Saimiri_boliviensis_boliviensis
ENSIPUG00000017291	eefsec	79	66.588	ENSSHAG00000014760	EEFSEC	99	64.050	Sarcophilus_harrisii
ENSIPUG00000017291	eefsec	98	74.662	ENSSFOG00015021109	eefsec	99	71.980	Scleropages_formosus
ENSIPUG00000017291	eefsec	98	74.523	ENSSMAG00000001454	eefsec	99	74.523	Scophthalmus_maximus
ENSIPUG00000017291	eefsec	99	74.271	ENSSDUG00000007924	eefsec	99	80.315	Seriola_dumerili
ENSIPUG00000017291	eefsec	98	75.096	ENSSLDG00000024985	eefsec	99	74.081	Seriola_lalandi_dorsalis
ENSIPUG00000017291	eefsec	54	72.727	ENSSARG00000003789	-	55	73.864	Sorex_araneus
ENSIPUG00000017291	eefsec	79	67.062	ENSSPUG00000004191	EEFSEC	100	64.596	Sphenodon_punctatus
ENSIPUG00000017291	eefsec	99	74.699	ENSSPAG00000001320	eefsec	99	79.545	Stegastes_partitus
ENSIPUG00000017291	eefsec	98	65.918	ENSSSCG00000011619	EEFSEC	99	68.165	Sus_scrofa
ENSIPUG00000017291	eefsec	97	67.823	ENSTGUG00000007895	EEFSEC	99	66.207	Taeniopygia_guttata
ENSIPUG00000017291	eefsec	98	76.015	ENSTRUG00000010327	eefsec	98	74.956	Takifugu_rubripes
ENSIPUG00000017291	eefsec	97	76.402	ENSTNIG00000003225	eefsec	99	75.000	Tetraodon_nigroviridis
ENSIPUG00000017291	eefsec	97	65.977	ENSTTRG00000000994	EEFSEC	99	63.113	Tursiops_truncatus
ENSIPUG00000017291	eefsec	97	65.363	ENSUAMG00000017283	EEFSEC	99	62.270	Ursus_americanus
ENSIPUG00000017291	eefsec	85	62.419	ENSVVUG00000018372	EEFSEC	95	62.419	Vulpes_vulpes
ENSIPUG00000017291	eefsec	87	67.804	ENSXETG00000002066	eefsec	99	67.804	Xenopus_tropicalis
ENSIPUG00000017291	eefsec	98	74.563	ENSXCOG00000019916	eefsec	99	73.438	Xiphophorus_couchianus
ENSIPUG00000017291	eefsec	98	74.369	ENSXMAG00000001839	eefsec	99	73.438	Xiphophorus_maculatus