EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000017350 (Gene tree)
Gene ID: 108259099
Gene Symbol: Ddx28
Alias: zgc:153386
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 1698 bases
Position: chr27:5082707-5084404
Accession: 108259099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000025624	DEAD	PF00270.29	1.7e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000026686	-	1698	XM_017458308	ENSIPUP00000025624	565 (aa)	XP_017313797	W5U9K9

Gene Model

Click here to download ENSIPUG00000017350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000017350's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000017350	Ddx28	64	30.607	ENSIPUG00000012876	ddx18	52	30.026
ENSIPUG00000017350	Ddx28	70	32.251	ENSIPUG00000020592	ddx31	57	32.160
ENSIPUG00000017350	Ddx28	55	30.000	ENSIPUG00000009463	EIF4A2	74	30.435
ENSIPUG00000017350	Ddx28	72	30.679	ENSIPUG00000008623	ddx52	61	31.204
ENSIPUG00000017350	Ddx28	66	30.749	ENSIPUG00000018977	-	78	30.749
ENSIPUG00000017350	Ddx28	64	35.443	ENSIPUG00000003494	ddx1	55	35.443
ENSIPUG00000017350	Ddx28	64	30.601	ENSIPUG00000007815	ddx5	55	31.492
ENSIPUG00000017350	Ddx28	64	31.148	ENSIPUG00000014448	ddx5	56	32.044
ENSIPUG00000017350	Ddx28	65	31.522	ENSIPUG00000015768	si:dkey-156n14.5	53	30.319
ENSIPUG00000017350	Ddx28	72	30.657	ENSIPUG00000005386	ddx49	81	30.657

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000017350	Ddx28	91	48.008	ENSG00000182810	DDX28	96	48.008	Homo_sapiens
ENSIPUG00000017350	Ddx28	99	61.888	ENSAPOG00000000991	ddx28	98	61.888	Acanthochromis_polyacanthus
ENSIPUG00000017350	Ddx28	89	49.222	ENSAMEG00000019426	DDX28	94	49.222	Ailuropoda_melanoleuca
ENSIPUG00000017350	Ddx28	98	60.708	ENSACIG00000021615	ddx28	98	60.708	Amphilophus_citrinellus
ENSIPUG00000017350	Ddx28	99	61.996	ENSAOCG00000004610	ddx28	98	61.996	Amphiprion_ocellaris
ENSIPUG00000017350	Ddx28	99	61.996	ENSAPEG00000002143	ddx28	98	61.996	Amphiprion_percula
ENSIPUG00000017350	Ddx28	98	62.301	ENSATEG00000018691	ddx28	98	62.301	Anabas_testudineus
ENSIPUG00000017350	Ddx28	89	47.140	ENSACAG00000009755	DDX28	93	47.535	Anolis_carolinensis
ENSIPUG00000017350	Ddx28	98	57.857	ENSACLG00000012984	ddx28	98	57.857	Astatotilapia_calliptera
ENSIPUG00000017350	Ddx28	100	73.010	ENSAMXG00000005878	ddx28	100	73.010	Astyanax_mexicanus
ENSIPUG00000017350	Ddx28	92	48.968	ENSBTAG00000004290	DDX28	95	48.968	Bos_taurus
ENSIPUG00000017350	Ddx28	88	49.606	ENSCAFG00000020327	DDX28	94	49.606	Canis_familiaris
ENSIPUG00000017350	Ddx28	88	49.606	ENSCAFG00020019785	DDX28	94	49.606	Canis_lupus_dingo
ENSIPUG00000017350	Ddx28	90	49.419	ENSCHIG00000009658	DDX28	93	49.419	Capra_hircus
ENSIPUG00000017350	Ddx28	90	49.518	ENSCPOG00000013746	DDX28	94	49.614	Cavia_porcellus
ENSIPUG00000017350	Ddx28	91	48.496	ENSCSAG00000018472	DDX28	95	48.496	Chlorocebus_sabaeus
ENSIPUG00000017350	Ddx28	81	51.844	ENSCPBG00000012105	DDX28	86	52.336	Chrysemys_picta_bellii
ENSIPUG00000017350	Ddx28	63	38.462	ENSCSAVG00000006341	-	94	38.187	Ciona_savignyi
ENSIPUG00000017350	Ddx28	87	49.109	ENSCGRG00001024412	Ddx28	94	49.109	Cricetulus_griseus_chok1gshd
ENSIPUG00000017350	Ddx28	99	57.491	ENSCSEG00000011651	ddx28	100	57.491	Cynoglossus_semilaevis
ENSIPUG00000017350	Ddx28	89	64.484	ENSCVAG00000004044	ddx28	90	64.484	Cyprinodon_variegatus
ENSIPUG00000017350	Ddx28	91	69.844	ENSDARG00000060411	ddx28	92	69.844	Danio_rerio
ENSIPUG00000017350	Ddx28	63	55.220	ENSDNOG00000033593	DDX28	98	55.041	Dasypus_novemcinctus
ENSIPUG00000017350	Ddx28	90	48.069	ENSDORG00000028868	Ddx28	94	48.456	Dipodomys_ordii
ENSIPUG00000017350	Ddx28	81	34.115	FBgn0086130	Dbp21E2	83	34.115	Drosophila_melanogaster
ENSIPUG00000017350	Ddx28	89	50.000	ENSETEG00000001062	-	93	50.000	Echinops_telfairi
ENSIPUG00000017350	Ddx28	73	41.711	ENSEBUG00000004791	ddx28	77	42.233	Eptatretus_burgeri
ENSIPUG00000017350	Ddx28	90	49.031	ENSEASG00005020387	DDX28	94	49.133	Equus_asinus_asinus
ENSIPUG00000017350	Ddx28	90	49.419	ENSECAG00000006451	DDX28	94	49.518	Equus_caballus
ENSIPUG00000017350	Ddx28	70	44.118	ENSEEUG00000005017	DDX28	93	44.118	Erinaceus_europaeus
ENSIPUG00000017350	Ddx28	94	64.419	ENSELUG00000005302	ddx28	99	65.134	Esox_lucius
ENSIPUG00000017350	Ddx28	89	48.828	ENSFCAG00000012858	DDX28	93	48.828	Felis_catus
ENSIPUG00000017350	Ddx28	89	64.694	ENSFHEG00000012573	ddx28	90	64.694	Fundulus_heteroclitus
ENSIPUG00000017350	Ddx28	90	61.464	ENSGMOG00000017045	ddx28	97	61.464	Gadus_morhua
ENSIPUG00000017350	Ddx28	89	46.169	ENSGALG00000048700	DDX28	88	46.525	Gallus_gallus
ENSIPUG00000017350	Ddx28	89	63.116	ENSGAFG00000009249	ddx28	89	63.116	Gambusia_affinis
ENSIPUG00000017350	Ddx28	93	62.571	ENSGACG00000016367	ddx28	98	62.571	Gasterosteus_aculeatus
ENSIPUG00000017350	Ddx28	76	50.463	ENSGAGG00000004565	DDX28	94	50.463	Gopherus_agassizii
ENSIPUG00000017350	Ddx28	90	48.842	ENSGGOG00000001220	DDX28	94	48.842	Gorilla_gorilla
ENSIPUG00000017350	Ddx28	98	60.714	ENSHBUG00000001016	ddx28	98	60.714	Haplochromis_burtoni
ENSIPUG00000017350	Ddx28	99	59.683	ENSHCOG00000017590	ddx28	99	59.683	Hippocampus_comes
ENSIPUG00000017350	Ddx28	90	49.903	ENSSTOG00000002064	DDX28	94	49.903	Ictidomys_tridecemlineatus
ENSIPUG00000017350	Ddx28	90	47.793	ENSJJAG00000012460	-	94	47.692	Jaculus_jaculus
ENSIPUG00000017350	Ddx28	98	59.253	ENSKMAG00000018183	ddx28	98	59.253	Kryptolebias_marmoratus
ENSIPUG00000017350	Ddx28	98	60.211	ENSLBEG00000006072	ddx28	99	60.211	Labrus_bergylta
ENSIPUG00000017350	Ddx28	89	57.228	ENSLACG00000005578	DDX28	87	57.228	Latimeria_chalumnae
ENSIPUG00000017350	Ddx28	91	63.760	ENSLOCG00000017604	ddx28	92	63.760	Lepisosteus_oculatus
ENSIPUG00000017350	Ddx28	89	49.323	ENSLAFG00000031239	DDX28	93	49.323	Loxodonta_africana
ENSIPUG00000017350	Ddx28	91	48.496	ENSMMUG00000010836	DDX28	95	48.496	Macaca_mulatta
ENSIPUG00000017350	Ddx28	98	61.580	ENSMAMG00000020220	ddx28	98	61.580	Mastacembelus_armatus
ENSIPUG00000017350	Ddx28	98	60.893	ENSMZEG00005009292	ddx28	98	60.893	Maylandia_zebra
ENSIPUG00000017350	Ddx28	89	40.156	ENSMICG00000012346	-	92	39.961	Microcebus_murinus
ENSIPUG00000017350	Ddx28	90	49.228	ENSMOCG00000009815	Ddx28	94	49.421	Microtus_ochrogaster
ENSIPUG00000017350	Ddx28	90	62.305	ENSMMOG00000000270	ddx28	91	62.305	Mola_mola
ENSIPUG00000017350	Ddx28	90	49.903	ENSMODG00000005303	DDX28	92	50.291	Monodelphis_domestica
ENSIPUG00000017350	Ddx28	99	60.601	ENSMALG00000008864	ddx28	99	60.601	Monopterus_albus
ENSIPUG00000017350	Ddx28	89	48.733	MGP_CAROLIEiJ_G0031510	Ddx28	93	48.733	Mus_caroli
ENSIPUG00000017350	Ddx28	89	48.738	ENSMUSG00000045538	Ddx28	93	48.738	Mus_musculus
ENSIPUG00000017350	Ddx28	89	48.438	MGP_PahariEiJ_G0023110	Ddx28	93	48.438	Mus_pahari
ENSIPUG00000017350	Ddx28	89	48.833	MGP_SPRETEiJ_G0032628	Ddx28	93	48.833	Mus_spretus
ENSIPUG00000017350	Ddx28	67	51.282	ENSMPUG00000006915	DDX28	97	51.282	Mustela_putorius_furo
ENSIPUG00000017350	Ddx28	88	49.409	ENSMLUG00000005899	DDX28	92	49.803	Myotis_lucifugus
ENSIPUG00000017350	Ddx28	90	48.555	ENSNGAG00000015762	Ddx28	94	48.555	Nannospalax_galili
ENSIPUG00000017350	Ddx28	98	61.071	ENSNBRG00000001337	ddx28	99	61.071	Neolamprologus_brichardi
ENSIPUG00000017350	Ddx28	98	61.250	ENSONIG00000020597	ddx28	99	61.250	Oreochromis_niloticus
ENSIPUG00000017350	Ddx28	90	48.462	ENSOCUG00000023074	DDX28	94	48.654	Oryctolagus_cuniculus
ENSIPUG00000017350	Ddx28	98	59.325	ENSORLG00000011968	ddx28	98	59.325	Oryzias_latipes
ENSIPUG00000017350	Ddx28	89	62.868	ENSORLG00020001951	ddx28	92	62.868	Oryzias_latipes_hni
ENSIPUG00000017350	Ddx28	89	63.065	ENSORLG00015023030	ddx28	92	63.065	Oryzias_latipes_hsok
ENSIPUG00000017350	Ddx28	98	58.741	ENSOMEG00000012445	ddx28	98	58.741	Oryzias_melastigma
ENSIPUG00000017350	Ddx28	89	50.677	ENSOGAG00000016895	DDX28	93	50.677	Otolemur_garnettii
ENSIPUG00000017350	Ddx28	78	47.778	ENSOARG00000003313	DDX28	99	47.778	Ovis_aries
ENSIPUG00000017350	Ddx28	91	45.437	ENSPPAG00000036971	DDX28	95	45.437	Pan_paniscus
ENSIPUG00000017350	Ddx28	90	49.031	ENSPPRG00000018322	DDX28	94	49.031	Panthera_pardus
ENSIPUG00000017350	Ddx28	90	47.674	ENSPTIG00000006444	DDX28	94	47.674	Panthera_tigris_altaica
ENSIPUG00000017350	Ddx28	91	48.099	ENSPTRG00000008258	DDX28	96	48.099	Pan_troglodytes
ENSIPUG00000017350	Ddx28	92	66.474	ENSPKIG00000021200	ddx28	95	66.474	Paramormyrops_kingsleyae
ENSIPUG00000017350	Ddx28	50	55.634	ENSPSIG00000001127	DDX28	95	55.634	Pelodiscus_sinensis
ENSIPUG00000017350	Ddx28	99	56.766	ENSPMGG00000007908	ddx28	99	56.766	Periophthalmus_magnuspinnatus
ENSIPUG00000017350	Ddx28	90	48.077	ENSPEMG00000003395	Ddx28	94	48.269	Peromyscus_maniculatus_bairdii
ENSIPUG00000017350	Ddx28	94	60.261	ENSPFOG00000020838	DDX28	94	60.261	Poecilia_formosa
ENSIPUG00000017350	Ddx28	94	60.261	ENSPFOG00000020952	ddx28	93	60.261	Poecilia_formosa
ENSIPUG00000017350	Ddx28	94	60.261	ENSPLAG00000016292	ddx28	93	60.261	Poecilia_latipinna
ENSIPUG00000017350	Ddx28	94	60.261	ENSPMEG00000011311	ddx28	93	60.261	Poecilia_mexicana
ENSIPUG00000017350	Ddx28	89	62.722	ENSPREG00000002899	ddx28	88	62.722	Poecilia_reticulata
ENSIPUG00000017350	Ddx28	91	47.438	ENSPPYG00000007481	DDX28	96	47.438	Pongo_abelii
ENSIPUG00000017350	Ddx28	90	47.876	ENSPCOG00000024632	DDX28	94	47.876	Propithecus_coquereli
ENSIPUG00000017350	Ddx28	98	60.893	ENSPNYG00000018804	ddx28	98	60.893	Pundamilia_nyererei
ENSIPUG00000017350	Ddx28	94	77.095	ENSPNAG00000014597	ddx28	99	77.095	Pygocentrus_nattereri
ENSIPUG00000017350	Ddx28	89	48.633	ENSRNOG00000019817	Ddx28	93	48.633	Rattus_norvegicus
ENSIPUG00000017350	Ddx28	91	65.377	ENSSFOG00015010181	ddx28	98	62.234	Scleropages_formosus
ENSIPUG00000017350	Ddx28	87	64.040	ENSSMAG00000006831	ddx28	92	64.040	Scophthalmus_maximus
ENSIPUG00000017350	Ddx28	100	61.606	ENSSDUG00000003257	ddx28	99	61.606	Seriola_dumerili
ENSIPUG00000017350	Ddx28	100	60.908	ENSSLDG00000004513	ddx28	99	60.908	Seriola_lalandi_dorsalis
ENSIPUG00000017350	Ddx28	90	49.027	ENSSARG00000014169	DDX28	94	49.416	Sorex_araneus
ENSIPUG00000017350	Ddx28	98	62.857	ENSSPAG00000000988	ddx28	98	62.857	Stegastes_partitus
ENSIPUG00000017350	Ddx28	90	48.555	ENSSSCG00000026038	DDX28	94	48.748	Sus_scrofa
ENSIPUG00000017350	Ddx28	98	58.111	ENSTRUG00000007815	ddx28	99	58.111	Takifugu_rubripes
ENSIPUG00000017350	Ddx28	89	60.672	ENSTNIG00000011352	ddx28	99	60.672	Tetraodon_nigroviridis
ENSIPUG00000017350	Ddx28	75	61.682	ENSTBEG00000017695	DDX28	75	61.682	Tupaia_belangeri
ENSIPUG00000017350	Ddx28	89	49.416	ENSUAMG00000016116	DDX28	93	49.416	Ursus_americanus
ENSIPUG00000017350	Ddx28	76	51.481	ENSUMAG00000019200	DDX28	88	51.481	Ursus_maritimus
ENSIPUG00000017350	Ddx28	75	43.779	ENSVVUG00000012876	DDX28	84	43.779	Vulpes_vulpes
ENSIPUG00000017350	Ddx28	88	46.720	ENSXETG00000005435	ddx28	96	46.720	Xenopus_tropicalis
ENSIPUG00000017350	Ddx28	94	61.194	ENSXCOG00000012364	ddx28	94	61.194	Xiphophorus_couchianus
ENSIPUG00000017350	Ddx28	91	63.301	ENSXMAG00000019603	ddx28	93	63.301	Xiphophorus_maculatus